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Sed0020348 (gene) of Chayote v1 genome

Gene IDSed0020348
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:22235623..22235961
RNA-Seq ExpressionSed0020348
SyntenySed0020348
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]1.7e-1954.55Show/hide
Query:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP
        I  +S  A +LIL    ++  NI H++ARLLP+++P  V++  ++HRK VET AV APL+S P  F H +S A  D E+ GGDFRPTT GHSPGAGHS  
Subjt:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP

Query:  PESHVDSKIH
        P SH+DSKIH
Subjt:  PESHVDSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1965.56Show/hide
Query:  NILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHR--SSIAASDAELQGGDFRPTTPGHSPGAGHSFPPESHVDSKIH
        NI H+  RLLP++ P    +  NLHRKIVETA V APL SRPP F R  SS    DAE+ GGDFRPTTPGHSPG GHS  P SHVDSKIH
Subjt:  NILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHR--SSIAASDAELQGGDFRPTTPGHSPGAGHSFPPESHVDSKIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1751.33Show/hide
Query:  MGGISFLSAAALLLILAYITNNNNNILHSEA-RLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSSIAASDAELQGGDFRPTTPGHSPGAGH
        M GI+ +SAAA  ++L   +  NNNI H++  RLLPM+                E  AV   L SRP +FH S IAA+D ++ GGDFRPTTPGHSPGAGH
Subjt:  MGGISFLSAAALLLILAYITNNNNNILHSEA-RLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSSIAASDAELQGGDFRPTTPGHSPGAGH

Query:  SFPPESHVDSKIH
           P+SHVDSKIH
Subjt:  SFPPESHVDSKIH

KGN55172.1 hypothetical protein Csa_012400 [Cucumis sativus]3.1e-1649.09Show/hide
Query:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSS-IAASDAELQGGDFRPTTPGHSPGAGHSFP
        I  +S    +LIL    ++  ++ H++AR+ P ++   V+++++LH KI ET AV APL+S P  F R +    S+AE+ GGDFRPTTPGHSPGAGHS  
Subjt:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSS-IAASDAELQGGDFRPTTPGHSPGAGHSFP

Query:  PESHVDSKIH
        P SH+DSKIH
Subjt:  PESHVDSKIH

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]4.1e-2157.27Show/hide
Query:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP
        I  +S  A +LIL    ++  NI H++ARLLPM++P  V++  +LHRK VET AV APL+S P  F H +S A  D E+ GGDFRPTTPGHSPGAGHS  
Subjt:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP

Query:  PESHVDSKIH
        P SH+DSKIH
Subjt:  PESHVDSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein1.5e-1649.09Show/hide
Query:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSS-IAASDAELQGGDFRPTTPGHSPGAGHSFP
        I  +S    +LIL    ++  ++ H++AR+ P ++   V+++++LH KI ET AV APL+S P  F R +    S+AE+ GGDFRPTTPGHSPGAGHS  
Subjt:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSS-IAASDAELQGGDFRPTTPGHSPGAGHSFP

Query:  PESHVDSKIH
        P SH+DSKIH
Subjt:  PESHVDSKIH

A0A5A7VEP2 Uncharacterized protein8.4e-2054.55Show/hide
Query:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP
        I  +S  A +LIL    ++  NI H++ARLLP+++P  V++  ++HRK VET AV APL+S P  F H +S A  D E+ GGDFRPTT GHSPGAGHS  
Subjt:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP

Query:  PESHVDSKIH
        P SH+DSKIH
Subjt:  PESHVDSKIH

A0A5D3D9H8 Uncharacterized protein2.0e-2157.27Show/hide
Query:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP
        I  +S  A +LIL    ++  NI H++ARLLPM++P  V++  +LHRK VET AV APL+S P  F H +S A  D E+ GGDFRPTTPGHSPGAGHS  
Subjt:  ISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTF-HRSSIAASDAELQGGDFRPTTPGHSPGAGHSFP

Query:  PESHVDSKIH
        P SH+DSKIH
Subjt:  PESHVDSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAATCAGTTTCCTCTCCGCCGCAGCTCTCCTTCTCATTTTAGCTTATATTACCAACAATAATAATAATATATTGCACTCCGAAGCAAGGTTGCTGCCCATGCA
GTCCCCGGCCGCGGTCGATCTTGCCCGAAATCTCCACCGAAAAATTGTCGAAACCGCCGCTGTCGATGCTCCTCTCGAGTCGAGGCCACCGACATTTCACCGCTCCTCCA
TAGCTGCTAGCGATGCGGAGCTGCAAGGCGGGGATTTCCGTCCAACCACCCCGGGACACAGCCCCGGGGCCGGTCACTCCTTTCCACCGGAGAGCCATGTGGATTCGAAA
ATCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAATCAGTTTCCTCTCCGCCGCAGCTCTCCTTCTCATTTTAGCTTATATTACCAACAATAATAATAATATATTGCACTCCGAAGCAAGGTTGCTGCCCATGCA
GTCCCCGGCCGCGGTCGATCTTGCCCGAAATCTCCACCGAAAAATTGTCGAAACCGCCGCTGTCGATGCTCCTCTCGAGTCGAGGCCACCGACATTTCACCGCTCCTCCA
TAGCTGCTAGCGATGCGGAGCTGCAAGGCGGGGATTTCCGTCCAACCACCCCGGGACACAGCCCCGGGGCCGGTCACTCCTTTCCACCGGAGAGCCATGTGGATTCGAAA
ATCCATTAA
Protein sequenceShow/hide protein sequence
MGGISFLSAAALLLILAYITNNNNNILHSEARLLPMQSPAAVDLARNLHRKIVETAAVDAPLESRPPTFHRSSIAASDAELQGGDFRPTTPGHSPGAGHSFPPESHVDSK
IH