CuGenDBv2

Gene ID	Sed0020360
Organism	Sechium edule (Chayote v1)
Description	30S ribosomal protein S14, chloroplastic
Genome location	Contig00297:156927..157229
RNA-Seq Expression	Sed0020360
Synteny	Sed0020360
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QZL38591.1 ribosomal protein S14 [Citrullus naudinianus]

6.1e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSL+EKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_004841781.1 ribosomal protein S14 [Cucumis melo subsp. melo]

7.9e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLK++ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009317384.1 ribosomal protein S14 [Coccinia grandis]

2.7e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009752918.1 ribosomal protein S14 [Momordica sessilifolia]

6.1e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

YP_009945415.1 ribosomal protein S14 [Sechium edule]

1.2e-48

100

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE66 Ribosomal protein S14

1.3e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A2Z2CGL0 30S ribosomal protein S14, chloroplastic

1.3e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6H0EPD4 30S ribosomal protein S14, chloroplastic

5.9e-49

100

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6H0ESP9 30S ribosomal protein S14, chloroplastic

1.3e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A0A6M3RTR8 30S ribosomal protein S14, chloroplastic

1.3e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIRRSLKK+ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

SwissProt top hits

e value

%identity

Alignment

A6MM34 30S ribosomal protein S14, chloroplastic

5.7e-49

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKR+KLEQKYHLIRRS KK+ISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

A6MMU2 30S ribosomal protein S14, chloroplastic

9.7e-49

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQRE+KR KLEQKYHLIRRS KKQISKVPSLS+KWEIHGKLQSPPRNSAP RLHRRCFLTGRPRANYRDFGLSGH+LREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

B1NWE8 30S ribosomal protein S14, chloroplastic

4.4e-49

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHL+RRS KK+ISKVPSLS+KWEIHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q3C1I0 30S ribosomal protein S14, chloroplastic

9.7e-49

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYH IRRS KK+ISKVPSLS+KWEI+GKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Q4VZN5 30S ribosomal protein S14, chloroplastic

3.9e-50

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MARKSLIQREKKRQKLEQKYHLIR+SLK +ISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Arabidopsis top hits

e value

%identity

Alignment

AT2G34520.1 mitochondrial ribosomal protein S14

3.0e-05

35.48

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Query:  EKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHG--KLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        + +R+ L  ++ L RR L K   K P L  +       KL   PRNSA  R+  RC  TGR R+    F +S  + R +     L G T+SSW
Subjt:  EKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHG--KLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

ATCG00330.1 chloroplast ribosomal protein S14

6.5e-48

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Query:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
        MA+KSLI REKKRQKLE+KYHLIRRS KK+ISK+PSLSEKW+IHGKLQSPPRNSAPTRLHRRCF TGRPRANYRDFGLSGHILREMV ACLLPGATRSSW
Subjt:  MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Sequences

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CDS sequence

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ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAACAAATAAGCAAAGTTCCATCGTT
GAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACCCGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGCGAGCTAACTATC
GAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

mRNA sequence

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Protein sequence

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MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Sed0020360 (gene) of Chayote v1 genome