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Sed0020386 (gene) of Chayote v1 genome

Gene IDSed0020386
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:22108449..22119350
RNA-Seq ExpressionSed0020386
SyntenySed0020386
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]9.8e-3382.69Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ N   R S  + FSASLSLLFVSALSDDSS KD   SGNHPSS S+TGSMVA+ILLGILVVVLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3282.69Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  RSS LV  SASLSLLFVSALS+DSS KD I SG H SS+S TGSMVA+ILLG LVVVLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

KAG7031355.1 hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-3281.73Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  RSS  + FSA LSLLFVSALSDDS+ KD IKSGNHPSS SNT SM+A+ILLG+LVVV LSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]3.0e-3484.62Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  R S  + FSASLSLLFVSALSDDSS KD I SGNHPSS SNTGSMVA+ILLGILV VLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

XP_022929545.1 uncharacterized protein LOC111436082 [Cucurbita moschata]2.2e-3282.69Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  RSS LV  SASLSLLFVSALS+DSS KD I SG H SS+S TGSMVA+ILLG LVVVLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein4.7e-3382.69Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ N   R S  + FSASLSLLFVSALSDDSS KD   SGNHPSS S+TGSMVA+ILLGILVVVLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A1S4DZ07 uncharacterized protein LOC1034933151.5e-3484.62Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  R S  + FSASLSLLFVSALSDDSS KD I SGNHPSS SNTGSMVA+ILLGILV VLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A5A7V4C4 Uncharacterized protein2.3e-2791.03Show/hide
Query:  LSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LSDDSS KD I SGNHPSS SNTGSMVA+ILLGILV VLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360821.1e-3282.69Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  RSS LV  SASLSLLFVSALS+DSS KD I SG H SS+S TGSMVA+ILLG LVVVLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

A0A6J1J6C2 uncharacterized protein LOC1114829871.1e-3282.69Show/hide
Query:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        M+ NL  RSS LV  SASLSLLFVSALS+DSS KD I SG H SS+S TGSMVA+ILLG LVVVLLSF LFKLWQKKRREEQYARLLKLFEEDDELEVEL
Subjt:  MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein2.7e-2056.73Show/hide
Query:  TGNLICRSSGLVVFSASLSLLFVSALSDDSSSKD-GIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL
        TG L  R    ++F AS+ L F   LS DS + + G+K+ +H SS S TG+ V ++L+G + V + SF L+KLWQKK+R+EQYARLLKLFEEDDELEVEL
Subjt:  TGNLICRSSGLVVFSASLSLLFVSALSDDSSSKD-GIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVEL

Query:  GLRD
        GLRD
Subjt:  GLRD

AT1G57765.1 unknown protein1.5e-1861.29Show/hide
Query:  VVFSASLSLLFVSALS-DDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        ++  AS+ L F   +S D +SS  G K+ +H SS S TG+ V  ILLG   V  LSF L+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  VVFSASLSLLFVSALS-DDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein1.5e-1858.82Show/hide
Query:  LICRSSGLVVFSASLSL--LFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGL
        L+C S  L  F A L L  ++     D +SS  G K+ +H SS S TG+ V  ILLG   V  LSF L+KLWQKK+R+EQYARLLKLFEEDDELEVELGL
Subjt:  LICRSSGLVVFSASLSL--LFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGL

Query:  RD
        RD
Subjt:  RD

AT3G53490.1 unknown protein2.9e-0639.47Show/hide
Query:  DDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  + K+  K G HP        ++ V+LLG++ V LL  + +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  DDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGAAATTTGATTTGTAGATCCTCTGGTTTGGTTGTGTTTTCGGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTGATGATTCCAGTTCCAAAGATGGAAT
TAAATCTGGGAATCATCCATCCTCCAACAGCAACACTGGCTCGATGGTTGCAGTCATCCTCCTTGGGATTTTGGTAGTGGTGTTATTGTCATTTTTGCTTTTCAAGTTAT
GGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTTTTGAAATTGTTTGAAGAAGATGATGAACTTGAGGTTGAGCTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
GTCGAAAAAGGCATCACCCTGAGAATATTTATTTATTTATTCTTTTGAGACAATCCTGAGAATATGAATAAACCGTATGTTAATGAAAATCTTGGATATTATGAAATCAA
TTTACATGTAAAAATCTTCTCTCAAAAAAAAGAAAAAAAATTACATGTAAAAATCCTTGTTTCTTTGAGGCAATTTCTAAACGCGTAGCGTCAGCGTGTTTTTGCAACTT
TCAGTTTCAGCTTTCCTTTCAACTTCCATTGCTCTGTTGCGAGGGGATCGAACGGCGGAATTTATTCCAGAGATGACCGGAAATTTGATTTGTAGATCCTCTGGTTTGGT
TGTGTTTTCGGCTTCGCTTTCCCTACTTTTCGTCTCCGCCCTTTCTGATGATTCCAGTTCCAAAGATGGAATTAAATCTGGGAATCATCCATCCTCCAACAGCAACACTG
GCTCGATGGTTGCAGTCATCCTCCTTGGGATTTTGGTAGTGGTGTTATTGTCATTTTTGCTTTTCAAGTTATGGCAAAAAAAGAGAAGAGAGGAGCAATATGCCCGACTT
TTGAAATTGTTTGAAGAAGATGATGAACTTGAGGTTGAGCTTGGTCTTCGGGATTGAAGAATTTCTGAAATTCTACTTCCTGAGGCTTACCATTATGTTGGAATTATTTC
ATGTCAAATGTCTAAAGATCCTAAGGTGATAGTTTGCTGTAAGGTTAGATTTTTTTTTTCTCTTTGATATATATATATACTTTTTAAAAATTTCGGGTGGGCACAACTTT
GTAATTCCCGTGTTACAACGAATCATATCCGATGAGGGTGAGATACCATTTTGTAAGGAGTGGCTGAAGGCTATATATGAGTTCAGGTTTGTAAAATTGATGAAAGGGTT
TTGATTAAAGCCTAAAATATTGTTCTTTCATTTAATGGTGTATGGAATTTACATGTACTCGAACATGCTGTCTCTGAAACTAAATGCATTTTCCTACATGACCAAACCCC
A
Protein sequenceShow/hide protein sequence
MTGNLICRSSGLVVFSASLSLLFVSALSDDSSSKDGIKSGNHPSSNSNTGSMVAVILLGILVVVLLSFLLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD