; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020389 (gene) of Chayote v1 genome

Gene IDSed0020389
OrganismSechium edule (Chayote v1)
DescriptionAlpha-amylase
Genome locationLG14:3098638..3101729
RNA-Seq ExpressionSed0020389
SyntenySed0020389
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595177.1 hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]9.2e-8883.84Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        MAAITHST  LI HTTV+SRP ILS  ASHPSLVFVGWNTRRRQ SKL+GVS PCPRN  +A KSS+ENT+I PS+D+PEDGVSLGTMKLP D+D+A+FE
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIA
        VLLFQWANSLCQGANLPLP+PLRVDKI  G RLGFI+I DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLLSALKKSVEIA
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIA

XP_022962862.1 uncharacterized protein LOC111463229 [Cucurbita moschata]2.7e-8782.5Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        MA ITHST  LI HTTV+SRP ILS  ASHPSLVFVGWNTRRRQ SKL+G+S PCPRN  +A KSS+ENT+I PS+D+PEDGVSLGTMKLP D+D+A+FE
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        VLLFQWANSLCQGANLPLP+PLRVDKI  G RLGFI+I DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLLSALKKSVEIA V
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV

XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]7.0e-8883.5Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        MAAITHST  LI HTTV+SRP ILS  ASHPSLVFVGWNTRRRQ SKL+GVS PCPRN  +A KSS+ENT+I PS+D+PEDGVSLGTMKLP D+D+A+FE
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        VLLFQWANSLCQGANLPLP+PLRVDKI  G RLGFI+I DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLLSALKKSVEIA V
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV

XP_023517184.1 uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo]9.2e-8883Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        MA+ITHST  LI HTTVDSRP ILS  ASHPSLV+VGWNTRRRQ SKL+GVS PCPRN  +A KSS+ENT+I PS+D+PEDGVSLGTMKLP D+D+A+FE
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        VLLFQWANSLCQGANLPLP+PLRVDKI  G RLGFI+I DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLLSALKKSVEIA V
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV

XP_038881940.1 uncharacterized protein LOC120073272 [Benincasa hispida]2.3e-8378.5Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        M AI+HST Q I +TTV+SRPCILS  ASHPSLVFV WNTR RQIS+ + +S PC RN K+  KSS EN +I PS+DDPEDGVSLGTMKLP D+D+ARF+
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        VLLFQWANSLCQGANLPLP+PL+VDKIP G RLGFITI DGKTEVLVYIDCLVFPATA+T PIFRAIRNGRL+DQS PGEPRIMRSLL ALKKSVEI++V
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV

TrEMBL top hitse value%identityAlignment
A0A0A0KFD4 Uncharacterized protein2.4e-7876.12Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASH-PSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARF
        M AI++STNQ I +  V+SRPC+ S+  SH PSLVF   NTR RQIS  + VSGPC R PK+  KSS EN +I PS+DDPEDGVSLGTMKLP D D+ARF
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASH-PSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARF

Query:  EVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAK
        +VLLFQWANSLCQGANLPLP+PL+VDKIP G RLGFITI DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLL ALKKSVEI++
Subjt:  EVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAK

Query:  V
        V
Subjt:  V

A0A1S3CH91 uncharacterized protein LOC1035009092.7e-7775.62Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASH-PSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARF
        M AI++STNQ   H  V+SRPC+LS   SH PSLVF   NTR RQIS  +  SGPC R   +  KSS EN +I PS+DDPEDGVSLGTMKLP D D+ARF
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASH-PSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARF

Query:  EVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAK
        +VLLFQWANSLCQGANLPLP+PL+VDKIP G RLGFITI DGKTEVLVYIDCLVFPATAST PIFRAIRNGRLKDQS PGEPRIMRSLL ALKKSVEI++
Subjt:  EVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAK

Query:  V
        V
Subjt:  V

A0A5A7SHD0 Uncharacterized protein2.7e-7775.62Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASH-PSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARF
        M AI++STNQ   H  V+SRPC+LS   SH PSLVF   NTR RQIS  +  SGPC R   +  KSS EN +I PS+DDPEDGVSLGTMKLP D D+ARF
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASH-PSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARF

Query:  EVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAK
        +VLLFQWANSLCQGANLPLP+PL+VDKIP G RLGFITI DGKTEVLVYIDCLVFPATAST PIFRAIRNGRLKDQS PGEPRIMRSLL ALKKSVEI++
Subjt:  EVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAK

Query:  V
        V
Subjt:  V

A0A6J1HDQ9 uncharacterized protein LOC1114632291.3e-8782.5Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        MA ITHST  LI HTTV+SRP ILS  ASHPSLVFVGWNTRRRQ SKL+G+S PCPRN  +A KSS+ENT+I PS+D+PEDGVSLGTMKLP D+D+A+FE
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        VLLFQWANSLCQGANLPLP+PLRVDKI  G RLGFI+I DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLLSALKKSVEIA V
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV

A0A6J1I6G0 uncharacterized protein LOC1114711573.4e-8883.5Show/hide
Query:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE
        MAAITHST  LI HTTV+SRP ILS  ASHPSLVFVGWNTRRRQ SKL+GVS PCPRN  +A KSS+ENT+I PS+D+PEDGVSLGTMKLP D+D+A+FE
Subjt:  MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFE

Query:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        VLLFQWANSLCQGANLPLP+PLRVDKI  G RLGFI+I DGKTEVLVYIDCLVFPATAS+ PIFRAIRNGRLKDQS PGEPRIMRSLLSALKKSVEIA V
Subjt:  VLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36145.1 unknown protein9.3e-4662.03Show/hide
Query:  QISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFEVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIED-GK
        Q+    G + P      + A +S  N  +   +   EDGVSLGTMKLP D D+ARFE LLFQWANSLCQGANLPLP+PL+VD+I GGARLGFI +ED GK
Subjt:  QISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFEVLLFQWANSLCQGANLPLPLPLRVDKIPGGARLGFITIED-GK

Query:  TEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV
        T+V VYIDCLVF  T   G +F+A RNGR KD++ PGE RIMRSLL ALKK+VEIA+V
Subjt:  TEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCATTACACACTCAACAAACCAACTCATTCCTCACACAACCGTCGATTCTCGGCCATGTATCTTGTCTGCAACGGCGTCTCATCCATCTCTGGTTTTCGTCGG
CTGGAACACTCGCCGTCGCCAAATCTCCAAGCTCGCCGGAGTCTCAGGCCCATGCCCTAGGAATCCGAAGATGGCGGCCAAGTCTTCGAAAGAGAACACGGAGATTTCGC
CGTCGGATGATGATCCTGAAGATGGCGTCTCGCTTGGGACCATGAAATTGCCGCCGGATGTTGACGTTGCCAGATTTGAGGTCTTGCTCTTCCAGTGGGCCAACAGTCTT
TGCCAGGGAGCTAACTTGCCGCTTCCATTGCCTTTGAGGGTTGACAAAATACCCGGTGGAGCTAGGCTTGGTTTTATCACAATTGAAGATGGAAAGACGGAAGTTCTCGT
GTATATAGATTGCTTAGTTTTTCCTGCTACTGCGAGCACTGGTCCAATTTTTCGAGCTATAAGAAATGGACGCTTAAAGGATCAGTCACTTCCTGGTGAACCAAGAATAA
TGAGAAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTAAAGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCATTACACACTCAACAAACCAACTCATTCCTCACACAACCGTCGATTCTCGGCCATGTATCTTGTCTGCAACGGCGTCTCATCCATCTCTGGTTTTCGTCGG
CTGGAACACTCGCCGTCGCCAAATCTCCAAGCTCGCCGGAGTCTCAGGCCCATGCCCTAGGAATCCGAAGATGGCGGCCAAGTCTTCGAAAGAGAACACGGAGATTTCGC
CGTCGGATGATGATCCTGAAGATGGCGTCTCGCTTGGGACCATGAAATTGCCGCCGGATGTTGACGTTGCCAGATTTGAGGTCTTGCTCTTCCAGTGGGCCAACAGTCTT
TGCCAGGGAGCTAACTTGCCGCTTCCATTGCCTTTGAGGGTTGACAAAATACCCGGTGGAGCTAGGCTTGGTTTTATCACAATTGAAGATGGAAAGACGGAAGTTCTCGT
GTATATAGATTGCTTAGTTTTTCCTGCTACTGCGAGCACTGGTCCAATTTTTCGAGCTATAAGAAATGGACGCTTAAAGGATCAGTCACTTCCTGGTGAACCAAGAATAA
TGAGAAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTAAAGTATAA
Protein sequenceShow/hide protein sequence
MAAITHSTNQLIPHTTVDSRPCILSATASHPSLVFVGWNTRRRQISKLAGVSGPCPRNPKMAAKSSKENTEISPSDDDPEDGVSLGTMKLPPDVDVARFEVLLFQWANSL
CQGANLPLPLPLRVDKIPGGARLGFITIEDGKTEVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSLPGEPRIMRSLLSALKKSVEIAKV