; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020400 (gene) of Chayote v1 genome

Gene IDSed0020400
OrganismSechium edule (Chayote v1)
Descriptiongibberellin-regulated protein 1-like
Genome locationLG13:20881190..20882081
RNA-Seq ExpressionSed0020400
SyntenySed0020400
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591269.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4488.12Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV AMLL+AFA +LL+E  QMVITTQVD PLP EIDCGE+CDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

XP_008466485.1 PREDICTED: gibberellin-regulated protein 1-like [Cucumis melo]1.3e-4386.14Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV  MLL+AFA +LL+E GQM+ITTQVD+PLP+EIDCG+ACDARC+LSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

XP_022937106.1 gibberellin-regulated protein 1-like [Cucurbita moschata]2.1e-4387.13Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV AMLL+AFA + L E  QMV TTQVD PLP EIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

XP_022975660.1 snakin-2-like [Cucurbita maxima]3.3e-4487.13Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV AMLL++FA +LL+E  QMVITTQVD PLP EIDCGE CDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

XP_023535343.1 gibberellin-regulated protein 11-like [Cucurbita pepo subsp. pepo]6.6e-4589.11Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV AMLL+AFA +LLVE  QM ITTQVD PLP EIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A0A0LGH8 Gibberellin-regulated protein 14.4e-4282.18Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGL+  +LL+AFA +LL+E GQMVITTQVD+PLP++IDCGEACDARC+LSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

A0A1S3CRE3 gibberellin-regulated protein 1-like6.1e-4486.14Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV  MLL+AFA +LL+E GQM+ITTQVD+PLP+EIDCG+ACDARC+LSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

A0A5A7V5C1 Gibberellin-regulated protein 1-like6.1e-4486.14Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV  MLL+AFA +LL+E GQM+ITTQVD+PLP+EIDCG+ACDARC+LSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

A0A6J1F9F4 gibberellin-regulated protein 1-like1.0e-4387.13Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV AMLL+AFA + L E  QMV TTQVD PLP EIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

A0A6J1IHC1 snakin-2-like1.6e-4487.13Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MAATKGLV AMLL++FA +LL+E  QMVITTQVD PLP EIDCGE CDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCY NMTTHGG+HKC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 111.3e-2254.74Show/hide
Query:  LVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP
        +++A LL+   +LL+++     + T  D P   +IDC   C  RC LSSR  +C RACGTCCARC CV PGTSGNYD CPCYG++TTHGG+ KCP
Subjt:  LVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP

P46688 Gibberellin-regulated protein 27.7e-2064.52Show/hide
Query:  EIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP
        +IDCG  C  RC  SSR K+C RAC +CC+RC CVPPGTSGN  +CPCY ++TTHGG+ KCP
Subjt:  EIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP

P46689 Gibberellin-regulated protein 18.8e-2455.45Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MA +K L IA LL++   L LV+    V  +Q  +   ++IDCG AC ARC+LS R ++C RACGTCC RC CVPPGT GNYD C CY ++TTHGG+ KC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

Q8GWK5 Gibberellin-regulated protein 97.7e-2065.57Show/hide
Query:  IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP
        I+CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCY ++ THG K KCP
Subjt:  IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP

Q93X17 Snakin-26.1e-2555.56Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPRE-------IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTT
        MA +K L  ++LL    +LLL+E  Q + T QV      E       IDCG AC ARC+LSSR ++C RACGTCCARC CVPPGTSGN + CPCY ++TT
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPRE-------IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTT

Query:  HGGKHKCP
        HG K KCP
Subjt:  HGGKHKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein5.5e-2165.57Show/hide
Query:  IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP
        I+CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCY ++ THG K KCP
Subjt:  IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP

AT1G22690.2 Gibberellin-regulated family protein5.5e-2165.57Show/hide
Query:  IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP
        I+CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCY ++ THG K KCP
Subjt:  IDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP

AT1G75750.1 GAST1 protein homolog 16.2e-2555.45Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MA +K L IA LL++   L LV+    V  +Q  +   ++IDCG AC ARC+LS R ++C RACGTCC RC CVPPGT GNYD C CY ++TTHGG+ KC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

AT1G75750.2 GAST1 protein homolog 13.7e-2554.46Show/hide
Query:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC
        MA +K L IA LL++   L LV+  +    +Q  +   ++IDCG AC ARC+LS R ++C RACGTCC RC CVPPGT GNYD C CY ++TTHGG+ KC
Subjt:  MAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKC

Query:  P
        P
Subjt:  P

AT2G18420.1 Gibberellin-regulated family protein9.0e-2454.74Show/hide
Query:  LVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP
        +++A LL+   +LL+++     + T  D P   +IDC   C  RC LSSR  +C RACGTCCARC CV PGTSGNYD CPCYG++TTHGG+ KCP
Subjt:  LVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGTCGAGCCATGGCAGCAACTAAAGGTCTTGTGATTGCCATGCTTCTTGTTGCTTTCGCTACGCTGCTTCTTGTGGAACCAGGCCAAATGGTTATCACAACTCA
GGTTGATGACCCTCTTCCTCGCGAGATAGATTGCGGGGAAGCTTGTGATGCGAGGTGCCAATTATCGTCGAGGCAGAAGATATGCAAGAGAGCGTGTGGAACCTGCTGTG
CTCGCTGTCAATGCGTTCCACCGGGAACTTCAGGAAACTACGATGTTTGTCCCTGCTATGGTAATATGACCACACATGGTGGCAAGCACAAGTGTCCCTAG
mRNA sequenceShow/hide mRNA sequence
TGTTTCTTTACTTCATTCCCTTCCTAGAACTAGCTCCCTATAAACCGACACCTCTCGCATAAGAAACTCCATCCAGATTTCCGACATGAATCGTCGAGCCATGGCAGCAA
CTAAAGGTCTTGTGATTGCCATGCTTCTTGTTGCTTTCGCTACGCTGCTTCTTGTGGAACCAGGCCAAATGGTTATCACAACTCAGGTTGATGACCCTCTTCCTCGCGAG
ATAGATTGCGGGGAAGCTTGTGATGCGAGGTGCCAATTATCGTCGAGGCAGAAGATATGCAAGAGAGCGTGTGGAACCTGCTGTGCTCGCTGTCAATGCGTTCCACCGGG
AACTTCAGGAAACTACGATGTTTGTCCCTGCTATGGTAATATGACCACACATGGTGGCAAGCACAAGTGTCCCTAGACACTCTTGCTGGTTCTATGTGAAGATGTTACGT
TTCACATTACAGATATCCAAAATAAAGATGTTAATATCAGAACAGACTTTTTCTGAGTAACAAATTATTGATTTTAGAAGTACATCAAGAATGAATTCTGTAGATTTCAC
TGTTTATAGCCATAGTGGAGTTGTCTAGAGGAGAGGGGCTTTTGGGATCTAAGAGATCATACGTTCTAGTCATTATAATCACCTACTTAAGAATTAATTTCTTATAGGCT
TTTTTTACAGTCAAATGTTGTATGGTCAAACGATTCTCCTGTGAAAATAGTCAAAGTGCATGTAAACTGGTCGAGACAC
Protein sequenceShow/hide protein sequence
MNRRAMAATKGLVIAMLLVAFATLLLVEPGQMVITTQVDDPLPREIDCGEACDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYGNMTTHGGKHKCP