; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020404 (gene) of Chayote v1 genome

Gene IDSed0020404
OrganismSechium edule (Chayote v1)
DescriptionRNA-binding KH domain-containing protein PEPPER-like
Genome locationLG09:5606727..5621820
RNA-Seq ExpressionSed0020404
SyntenySed0020404
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR004088 - K Homology domain, type 1
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592929.1 RNA-binding KH domain-containing protein PEPPER, partial [Cucurbita argyrosperma subsp. sororia]1.5e-15786.97Show/hide
Query:  MQPSNFPLYPSMPAKP--PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK
        MQ  + P+YPSMPAK   PLPG+V +SKP  A   KRRR+DDP  P S+ A DVSAPKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETKATIK
Subjt:  MQPSNFPLYPSMPAKP--PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK

Query:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL
        IADAVARYEERVIIISSKD EN VTDAE ALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILAPNQL
Subjt:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL

Query:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT
        PLCASAHESDRVVQISGDV AVLKALEEIGNQLRV+P RQVISVSPTYNYNAIHPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNESGAT
Subjt:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT

Query:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        IKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

XP_023005036.1 poly(rC)-binding protein 4-like isoform X1 [Cucurbita maxima]2.3e-15885.99Show/hide
Query:  MQPSNFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK
        MQ  + P+YPSMPAK       PLPG+V +SKP  A   KRRR+DDP  P S+ A DV APKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETK
Subjt:  MQPSNFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK

Query:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA
        ATIKIADAVARYEERVIIISSKD EN VTDAEKALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILA
Subjt:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE
        PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNA+HPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNE
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE

Query:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        SGATIKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

XP_023005037.1 poly(rC)-binding protein 4-like isoform X2 [Cucurbita maxima]1.9e-15786.4Show/hide
Query:  NFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK
        + P+YPSMPAK       PLPG+V +SKP  A   KRRR+DDP  P S+ A DV APKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETKATIK
Subjt:  NFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK

Query:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL
        IADAVARYEERVIIISSKD EN VTDAEKALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILAPNQL
Subjt:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL

Query:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT
        PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNA+HPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNESGAT
Subjt:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT

Query:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        IKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

XP_023514318.1 poly(rC)-binding protein 4-like [Cucurbita pepo subsp. pepo]1.3e-15885.99Show/hide
Query:  MQPSNFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK
        MQ  + P+YPSMPAK       PLPG+V +SKP  A   KRRR+DDP  P S+ A DVSAPKR  K HDVLFRIV PS QIGKVIGKVGCRIQKVREETK
Subjt:  MQPSNFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK

Query:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA
        ATIKIADAVARYEERVIIISSKD EN VTDAEKALQQIAALILK+DGTS EELKVG GHVAANT+RLLIAGSQAG LIGASGQNIE+LRN SGA++TILA
Subjt:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE
        PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNAIHPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNE
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE

Query:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        SGATIKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

XP_038875599.1 flowering locus K homology domain-like isoform X1 [Benincasa hispida]1.1e-15784.87Show/hide
Query:  MQPSNFPLYPS------MPAKPPLPGSVFLSKPA-LAGNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK
        MQP + PLYPS      +P   PLPG++ +S+P      KRRR+DDP  PNS+ A+DVSAPKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETK
Subjt:  MQPSNFPLYPS------MPAKPPLPGSVFLSKPA-LAGNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK

Query:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA
        ATIKIADAVARYEERVIIISSKDN+N VTDAEKALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA+ITILA
Subjt:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE
        PNQLPLCASAHESDRVVQISGD+PAVLKALEEIGNQLRV+P RQVISVSPTYNYN +HPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNE
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE

Query:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ++RQAG Q TA+QMW
Subjt:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

TrEMBL top hitse value%identityAlignment
A0A1S3CB11 RNA-binding KH domain-containing protein PEPPER-like8.7e-15684.87Show/hide
Query:  MQPSNFPLYPSMPA------KPPLPGSVFLSKPA-LAGNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK
        MQP + PLYPSMPA        PLPG++ +S+P      KRRR+DD    NSD A+DVSAPKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETK
Subjt:  MQPSNFPLYPSMPA------KPPLPGSVFLSKPA-LAGNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK

Query:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA
        ATIKIADAVARYEERVIIISSKDNEN VTDAEKALQQIAALILK+DG+S EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA+ITILA
Subjt:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE
        PNQLPLCASAHESDRVVQISGD+ AVLKALEEIGNQLRV+P RQVISVSPTYNYN +HPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNE
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE

Query:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ++RQAG Q TA+QMW
Subjt:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

A0A6J1H6G7 flowering locus K homology domain-like isoform X13.5e-15786.69Show/hide
Query:  MQPSNFPLYPSMPAKP--PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK
        MQ  + P+YPSMPAK   PLPG+V +SK   A   KRRR+DDP    S+ A DVSAPKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETKATIK
Subjt:  MQPSNFPLYPSMPAKP--PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK

Query:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL
        IADAVARYEERVIIISSKD EN VTDAE ALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILAPNQL
Subjt:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL

Query:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT
        PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNAIHPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNESGAT
Subjt:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT

Query:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        IKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

A0A6J1H7W9 flowering locus K homology domain-like isoform X23.0e-15687.11Show/hide
Query:  NFPLYPSMPAKP--PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADA
        + P+YPSMPAK   PLPG+V +SK   A   KRRR+DDP    S+ A DVSAPKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETKATIKIADA
Subjt:  NFPLYPSMPAKP--PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADA

Query:  VARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCA
        VARYEERVIIISSKD EN VTDAE ALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILAPNQLPLCA
Subjt:  VARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCA

Query:  SAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGATIKVC
        SAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNAIHPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNESGATIKVC
Subjt:  SAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGATIKVC

Query:  GGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        GGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  GGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

A0A6J1KS32 poly(RC)-binding protein 4-like isoform X29.3e-15886.4Show/hide
Query:  NFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK
        + P+YPSMPAK       PLPG+V +SKP  A   KRRR+DDP  P S+ A DV APKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETKATIK
Subjt:  NFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIK

Query:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL
        IADAVARYEERVIIISSKD EN VTDAEKALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILAPNQL
Subjt:  IADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQL

Query:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT
        PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNA+HPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNESGAT
Subjt:  PLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGAT

Query:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        IKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  IKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

A0A6J1KTT5 poly(RC)-binding protein 4-like isoform X11.1e-15885.99Show/hide
Query:  MQPSNFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK
        MQ  + P+YPSMPAK       PLPG+V +SKP  A   KRRR+DDP  P S+ A DV APKR  K HDVLFRIVVPS QIGKVIGKVGCRIQKVREETK
Subjt:  MQPSNFPLYPSMPAKP------PLPGSVFLSKPALA-GNKRRRDDDPSAPNSDPAADVSAPKR-PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETK

Query:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA
        ATIKIADAVARYEERVIIISSKD EN VTDAEKALQQIAALILK+DGTS EELKVG GHVAANTIRLLIAGSQAG LIGASGQNIE+LRN SGA++TILA
Subjt:  ATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILA

Query:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE
        PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRV+P RQVISVSPTYNYNA+HPPQSYMDPTSVNYV FEMLISETLVGGLIGIGGFNISRIRNE
Subjt:  PNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNE

Query:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW
        SGATIKVCGGRGEQNYRQ+QFGGSAEQVALAKQRVDEYIYSQL+RQAG QPTA+QMW
Subjt:  SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQLVRQAGAQPTAVQMW

SwissProt top hitse value%identityAlignment
F4KDN0 KH domain-containing protein HEN44.6e-1330.39Show/hide
Query:  DDDPSAPNSDPAADVSAPKRPKP-------HDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENLVTDAEKALQ
        D  P +  +  +   +A  +P P        DV+F+I+  +   G VIG  G  ++ +  ET A I + + +   EER+I +++ +N E   + A+KA+ 
Subjt:  DDDPSAPNSDPAADVSAPKRPKP-------HDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENLVTDAEKALQ

Query:  QIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQ
         I + + +    +T ++ +  G  ++ T RL++  SQ G ++G  G  + ++R  +GA I IL   Q P C S  E+D+VVQI+G+ P V +A+  I ++
Subjt:  QIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQ

Query:  LRVS
        LR S
Subjt:  LRVS

P57724 Poly(rC)-binding protein 49.6e-1125Show/hide
Query:  RIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALIL--KDDGTSTEELKVGAGHVAANTIRLLIA
        R+++   ++G +IGK G  ++++RE++ A I I++            S  +    +T +  A+    ++I    D+         G+      T+RL+I 
Subjt:  RIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENLVTDAEKALQQIAALIL--KDDGTSTEELKVGAGHVAANTIRLLIA

Query:  GSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEI----------GNQLRVSPSRQVISVSPTYN-------
         SQ G LIG +G  I+++R  +GA + + A + LP     + ++R V +SG   A++  + +I          G  +   PS  + +V  + N       
Subjt:  GSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEI----------GNQLRVSPSRQVISVSPTYN-------

Query:  -YNAIHPPQ--------------------SYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAEQVALAK
         Y A+ P +                      MDP S    + E L+   L+G +IG  G  IS IR  SGA IK+         R +   GS   +ALA+
Subjt:  -YNAIHPPQ--------------------SYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAEQVALAK

P58223 KH domain-containing protein At4g183753.3e-1130.1Show/hide
Query:  SAPNSDPAADVSAPKRPKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII-------------SSKDNENLVTDAEKAL
        S  N +    +S  K  +   V++RI+ P   +G VIGK G  I  +R  TKA IK+ D +    +RVI I             +  +NE L    +  L
Subjt:  SAPNSDPAADVSAPKRPKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIII-------------SSKDNENLVTDAEKAL

Query:  QQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPN-QLPLCASAHESDRVVQISGDVPAVLKAL
        +   A++  D+  +T   K           RLL+  SQ+  LIG +G+NI+++R  + A++ +++ +   P    A E D VV ISG+  +V +AL
Subjt:  QQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPN-QLPLCASAHESDRVVQISGDVPAVLKAL

Q9SR13 Flowering locus K homology domain1.3e-1529.87Show/hide
Query:  SAPNSDPAADVSAPKRPK-----PHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENLVTDAEKALQQIAALI
        S   S+P  D +     K     P + +FR++VP+ ++G +IG+ G  I+K+ EET+A IKI D      ER +++S K+  E+ +  +   L ++   I
Subjt:  SAPNSDPAADVSAPKRPK-----PHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENLVTDAEKALQQIAALI

Query:  LKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR----
        +  DG   E  +  A   +  + RLL+  SQAG LIG  G  ++ ++  S   + +L    LP+ A   + DRVV++ G+  +V +ALE I + LR    
Subjt:  LKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR----

Query:  ---VSPSRQVISVSPTYNYNAIHPPQSYMDP
           + P  +     PT   + + PP     P
Subjt:  ---VSPSRQVISVSPTYNYNAIHPPQSYMDP

Q9SZH4 RNA-binding KH domain-containing protein PEPPER1.5e-1632.49Show/hide
Query:  DDDPSAPNSDPAADVSAPKR--PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENLVTDAEKALQQIAAL
        D   +A  + P  + SA +R    P D +FR++VP +++G +IG+ G  I+K+ EET+A IK+ D      +R+++IS K+  E  ++ A  A+ ++   
Subjt:  DDDPSAPNSDPAADVSAPKR--PKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENLVTDAEKALQQIAAL

Query:  ILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR
        +        ++++  AG V  +++RLL+A +QA  LIG  G  I+ +   SGA++ IL+  + P  A+  + +R+V + G+   +LKALE I   LR
Subjt:  ILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLR

Arabidopsis top hitse value%identityAlignment
AT1G14170.1 RNA-binding KH domain-containing protein1.1e-2029.48Show/hide
Query:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NLVTDAEKALQQIAALIL----KDDGTSTEELKVG
        D ++R + P  + G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E         LV  A  AL ++  +++    +DDGT  +     
Subjt:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NLVTDAEKALQQIAALIL----KDDGTSTEELKVG

Query:  AGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSR-QVISVSPTYNYN
         G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  +PSR Q + +S   + +
Subjt:  AGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSR-QVISVSPTYNYN

Query:  AIHPPQSYMDPTSVNYVNFEMLISETL----------------VGGLIGIGGFNISRIRNESGATIKV
        ++H P + +   ++   +    +   +                VGG+IG GG  I++IR E+GATI+V
Subjt:  AIHPPQSYMDPTSVNYVNFEMLISETL----------------VGGLIGIGGFNISRIRNESGATIKV

AT1G14170.2 RNA-binding KH domain-containing protein9.5e-2229.74Show/hide
Query:  HDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NLVTDAEKALQQIAALIL----KDDGTSTEELKV
        HD ++R + P  + G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E         LV  A  AL ++  +++    +DDGT  +    
Subjt:  HDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NLVTDAEKALQQIAALIL----KDDGTSTEELKV

Query:  GAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSR-QVISVSPTYNY
          G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  +PSR Q + +S   + 
Subjt:  GAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSR-QVISVSPTYNY

Query:  NAIHPPQSYMDPTSVNYVNFEMLISETL----------------VGGLIGIGGFNISRIRNESGATIKV
        +++H P + +   ++   +    +   +                VGG+IG GG  I++IR E+GATI+V
Subjt:  NAIHPPQSYMDPTSVNYVNFEMLISETL----------------VGGLIGIGGFNISRIRNESGATIKV

AT1G14170.3 RNA-binding KH domain-containing protein1.1e-2029.48Show/hide
Query:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NLVTDAEKALQQIAALIL----KDDGTSTEELKVG
        D ++R + P  + G +IGK G   +++R ETK+ ++I +A+   EERV+ + S + E         LV  A  AL ++  +++    +DDGT  +     
Subjt:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNE--------NLVTDAEKALQQIAALIL----KDDGTSTEELKVG

Query:  AGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSR-QVISVSPTYNYN
         G     T+R+L+   Q G +IG  GQ I+ LRN + A I ++  + LP CA     D ++ I G+   V +AL ++ + L  +PSR Q + +S   + +
Subjt:  AGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSR-QVISVSPTYNYN

Query:  AIHPPQSYMDPTSVNYVNFEMLISETL----------------VGGLIGIGGFNISRIRNESGATIKV
        ++H P + +   ++   +    +   +                VGG+IG GG  I++IR E+GATI+V
Subjt:  AIHPPQSYMDPTSVNYVNFEMLISETL----------------VGGLIGIGGFNISRIRNESGATIKV

AT5G15270.1 RNA-binding KH domain-containing protein2.1e-2431.49Show/hide
Query:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHV
        D +FR + P  +IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S         D E +++ A+ AL +I   ++ DD  S E+   G   V
Subjt:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHV

Query:  AANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNA----
           T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG+V  V KAL +I ++L  +PSR    +S +  Y A    
Subjt:  AANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNA----

Query:  -----------------------------IHPPQSYMDPTSVNYVNFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN
                                       PP++  DP +  +  F  L+S    +  +IG GG  I+++R E+ ATIKV   R E N
Subjt:  -----------------------------IHPPQSYMDPTSVNYVNFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN

AT5G15270.2 RNA-binding KH domain-containing protein2.1e-2431.49Show/hide
Query:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHV
        D +FR + P  +IG VIG+ G  ++++R +T++ I+I +A+   +ERVI I S         D E +++ A+ AL +I   ++ DD  S E+   G   V
Subjt:  DVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK--------DNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHV

Query:  AANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNA----
           T +LL+   Q G ++G  GQ ++ +R+ +GA I I+    +PLCA    SD ++QISG+V  V KAL +I ++L  +PSR    +S +  Y A    
Subjt:  AANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLKALEEIGNQLRVSPSRQVISVSPTYNYNA----

Query:  -----------------------------IHPPQSYMDPTSVNYVNFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN
                                       PP++  DP +  +  F  L+S    +  +IG GG  I+++R E+ ATIKV   R E N
Subjt:  -----------------------------IHPPQSYMDPTSVNYVNFEMLISET-LVGGLIGIGGFNISRIRNESGATIKVCGGRGEQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCAAGCAATTTCCCACTCTACCCTTCCATGCCCGCCAAGCCTCCCTTGCCCGGCTCCGTCTTCCTCTCCAAGCCCGCCCTCGCCGGCAACAAACGCCGCCGCGA
CGACGACCCCTCCGCCCCCAATTCCGACCCCGCCGCCGACGTGTCGGCCCCCAAGAGGCCGAAGCCCCACGACGTGCTCTTCAGAATCGTCGTGCCCTCGAGCCAGATCG
GGAAGGTTATTGGGAAAGTCGGTTGTAGGATTCAGAAGGTTCGTGAGGAGACTAAAGCTACTATCAAGATTGCTGATGCTGTTGCGCGGTATGAAGAACGTGTTATCATT
ATAAGTTCTAAGGATAATGAGAATTTGGTTACTGATGCAGAGAAAGCACTTCAGCAAATTGCAGCGCTGATATTGAAGGACGATGGTACCAGCACTGAGGAGCTAAAAGT
TGGAGCAGGGCATGTGGCTGCCAATACCATAAGGCTCCTCATAGCAGGATCTCAAGCAGGTTTTTTGATTGGTGCCTCGGGTCAAAATATTGAACAATTGAGGAATTATT
CGGGTGCGACAATTACGATCCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCCCATGAATCTGATCGAGTGGTGCAGATATCAGGGGATGTTCCTGCAGTTTTGAAG
GCGCTTGAGGAGATAGGCAATCAGCTAAGGGTAAGTCCATCTCGGCAAGTCATTTCTGTCAGCCCAACATATAATTATAATGCAATACACCCACCACAATCATATATGGA
TCCTACCTCAGTTAATTATGTAAACTTTGAAATGTTGATATCGGAGACGTTGGTGGGTGGGTTGATTGGGATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTG
GAGCCACAATCAAGGTTTGTGGTGGAAGAGGTGAACAAAATTACAGGCAAATTCAATTTGGTGGAAGTGCTGAACAGGTAGCATTGGCAAAGCAGAGGGTTGATGAATAT
ATTTATTCTCAGTTGGTGCGACAAGCTGGTGCTCAACCGACAGCTGTGCAGATGTGGTAA
mRNA sequenceShow/hide mRNA sequence
AAAGAAATGGCTTGTACATAGAGAGAGAGAGTAAAATTAGAAGCATATAAAAAGTTGGCCTCTCCTCTGGTTCTTCTCTATGGTATCATCTTCATCATCTTCTTCTTCAT
CACTTCAACATTCACAACTCACTAACTGAACAATTCCTCCACCAGAATATGCAGCCAAGCAATTTCCCACTCTACCCTTCCATGCCCGCCAAGCCTCCCTTGCCCGGCTC
CGTCTTCCTCTCCAAGCCCGCCCTCGCCGGCAACAAACGCCGCCGCGACGACGACCCCTCCGCCCCCAATTCCGACCCCGCCGCCGACGTGTCGGCCCCCAAGAGGCCGA
AGCCCCACGACGTGCTCTTCAGAATCGTCGTGCCCTCGAGCCAGATCGGGAAGGTTATTGGGAAAGTCGGTTGTAGGATTCAGAAGGTTCGTGAGGAGACTAAAGCTACT
ATCAAGATTGCTGATGCTGTTGCGCGGTATGAAGAACGTGTTATCATTATAAGTTCTAAGGATAATGAGAATTTGGTTACTGATGCAGAGAAAGCACTTCAGCAAATTGC
AGCGCTGATATTGAAGGACGATGGTACCAGCACTGAGGAGCTAAAAGTTGGAGCAGGGCATGTGGCTGCCAATACCATAAGGCTCCTCATAGCAGGATCTCAAGCAGGTT
TTTTGATTGGTGCCTCGGGTCAAAATATTGAACAATTGAGGAATTATTCGGGTGCGACAATTACGATCCTTGCCCCAAATCAATTACCTCTTTGTGCATCTGCCCATGAA
TCTGATCGAGTGGTGCAGATATCAGGGGATGTTCCTGCAGTTTTGAAGGCGCTTGAGGAGATAGGCAATCAGCTAAGGGTAAGTCCATCTCGGCAAGTCATTTCTGTCAG
CCCAACATATAATTATAATGCAATACACCCACCACAATCATATATGGATCCTACCTCAGTTAATTATGTAAACTTTGAAATGTTGATATCGGAGACGTTGGTGGGTGGGT
TGATTGGGATTGGTGGCTTCAACATATCAAGAATCAGAAATGAATCTGGAGCCACAATCAAGGTTTGTGGTGGAAGAGGTGAACAAAATTACAGGCAAATTCAATTTGGT
GGAAGTGCTGAACAGGTAGCATTGGCAAAGCAGAGGGTTGATGAATATATTTATTCTCAGTTGGTGCGACAAGCTGGTGCTCAACCGACAGCTGTGCAGATGTGGTAAAT
CTCAAACATTGAGAATTGTTGCTTTTTATGGGAAGCTCTGAAGAACAGCACCTCCTACAAACACATCTGATGATTGGATGAATGTGAGGTGGCTCTGTGAAGTGCAACAT
GATTTTGAAATAATGGCTTCCTTTTCTTTTTTTTTTCTTTTTTTTTTAAATTTAACTGTGACATATTGTAATTGTGGCTAATAGATTGAATATTTTATGTATTGACAACT
TAAGGGTTTCAATAGCTATAAAAGGTTGCTAGGAAAAGTTTGGCTTTCAGCTCTGAGTCCTGGAATAGAACTGTAATATCTTTCTTTATGACTCATCTTATTTCTTCAAA
GTGCTTTTACCTCAAAAGGGTTTTATATTAGCATTTTTAGGAGAAGCCAGTGAAATGAAATGTTTACTTTGATTATAGTATCA
Protein sequenceShow/hide protein sequence
MQPSNFPLYPSMPAKPPLPGSVFLSKPALAGNKRRRDDDPSAPNSDPAADVSAPKRPKPHDVLFRIVVPSSQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVII
ISSKDNENLVTDAEKALQQIAALILKDDGTSTEELKVGAGHVAANTIRLLIAGSQAGFLIGASGQNIEQLRNYSGATITILAPNQLPLCASAHESDRVVQISGDVPAVLK
ALEEIGNQLRVSPSRQVISVSPTYNYNAIHPPQSYMDPTSVNYVNFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEY
IYSQLVRQAGAQPTAVQMW