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Sed0020410 (gene) of Chayote v1 genome

Gene IDSed0020410
OrganismSechium edule (Chayote v1)
DescriptionTranscription initiation factor TFIID subunit 10
Genome locationLG11:27002220..27009910
RNA-Seq ExpressionSed0020410
SyntenySed0020410
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:1990841 - promoter-specific chromatin binding (molecular function)
InterPro domainsIPR003923 - Transcription initiation factor TFIID, 23-30kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598532.1 Transcription initiation factor TFIID subunit 10, partial [Cucurbita argyrosperma subsp. sororia]5.9e-6291.91Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_004138687.1 transcription initiation factor TFIID subunit 10 [Cucumis sativus]1.5e-6292.65Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M HNQQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_008445293.1 PREDICTED: transcription initiation factor TFIID subunit 10 isoform X1 [Cucumis melo]2.6e-6292.65Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_022962589.1 transcription initiation factor TFIID subunit 10 [Cucurbita moschata]5.9e-6291.91Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

XP_038886703.1 transcription initiation factor TFIID subunit 10 isoform X1 [Benincasa hispida]2.6e-6292.65Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

TrEMBL top hitse value%identityAlignment
A0A0A0LPV6 Transcription initiation factor TFIID subunit 107.5e-6392.65Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M HNQQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A1S3BD75 Transcription initiation factor TFIID subunit 101.3e-6292.65Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1BVJ5 Transcription initiation factor TFIID subunit 101.8e-6189.71Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQ +E RHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR A++VKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKHQEYFADSPSTGVD TSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1HHI7 Transcription initiation factor TFIID subunit 102.8e-6291.91Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

A0A6J1KB50 Transcription initiation factor TFIID subunit 102.8e-6291.91Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H+QQA+ SRHDDDAALSEFLASLMEYTPT+PDELVEHYLGKSGFQCP+V LIRLVAVATQKFVADVASDALQHCKAR AAVVKDKRDKQQ+DKRL+LT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        M+DLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

SwissProt top hitse value%identityAlignment
O04173 Transcription initiation factor TFIID subunit 102.0e-5782.35Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H QQ+ E++H+DDAAL+EFLASLM+YTPT+PD+LVEHYL KSGFQCP+V LIRLVAVATQKFVADVASDALQHCKARPA VVKDK  KQQ+DKRLVLT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

Q12962 Transcription initiation factor TFIID subunit 101.8e-2146.15Show/hide
Query:  LSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLTMEDLSKALREYGVNVKH
        L +FL  L +YTPT+PD +  +YL ++GF+  +  +IRL+++A QKF++D+A+DALQHCK +  A    +   + +D++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q8K0H5 Transcription initiation factor TFIID subunit 101.8e-2146.15Show/hide
Query:  LSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLTMEDLSKALREYGVNVKH
        L +FL  L +YTPT+PD +  +YL ++GF+  +  +IRL+++A QKF++D+A+DALQHCK +  A    +   + +D++  LTMEDL+ AL EYG+NVK 
Subjt:  LSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLTMEDLSKALREYGVNVKH

Query:  QEYF
          YF
Subjt:  QEYF

Q9U5W9 Transcription initiation factor TFIID subunit 107.8e-1736.84Show/hide
Query:  DDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAV------VKDKRDKQQRDKRLVLTMEDLSKA
        +++ + E +  L +Y+PT+PD L  H L  +GF   +  ++RLV+V+ QKF++D+A+DALQHCK R   +         K  K  +D++  L MEDL  A
Subjt:  DDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAV------VKDKRDKQQRDKRLVLTMEDLSKA

Query:  LREYGVNVKHQEYF
        L ++G+ ++  +YF
Subjt:  LREYGVNVKHQEYF

Q9XZT7 Transcription initiation factor TFIID subunit 10b2.4e-1841.35Show/hide
Query:  LSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARP-AAVVKDKRDKQQRDKRLVLTMEDLSKALREYGVNVK
        LS+F++ L +YTP +PD +  HYL   GFQ  +  ++RL+++A QK+++D+  DALQH KAR            + +D++  LTMEDL  AL +YG+NV+
Subjt:  LSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARP-AAVVKDKRDKQQRDKRLVLTMEDLSKALREYGVNVK

Query:  HQEY
          +Y
Subjt:  HQEY

Arabidopsis top hitse value%identityAlignment
AT4G31720.1 TBP-associated factor II 151.4e-5882.35Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H QQ+ E++H+DDAAL+EFLASLM+YTPT+PD+LVEHYL KSGFQCP+V LIRLVAVATQKFVADVASDALQHCKARPA VVKDK  KQQ+DKRLVLT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE

AT4G31720.2 TBP-associated factor II 151.4e-5882.35Show/hide
Query:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT
        M H QQ+ E++H+DDAAL+EFLASLM+YTPT+PD+LVEHYL KSGFQCP+V LIRLVAVATQKFVADVASDALQHCKARPA VVKDK  KQQ+DKRLVLT
Subjt:  MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLT

Query:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE
        MEDLSKALREYGVNVKH EYFADSPSTG+D  +R+E
Subjt:  MEDLSKALREYGVNVKHQEYFADSPSTGVDSTSREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACATAACCAACAAGCGAGTGAAAGCAGGCACGACGATGACGCAGCTCTCTCAGAGTTCTTAGCGTCTCTAATGGAGTATACTCCCACTGTTCCCGACGAATTGGT
GGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTAATGTACTATTGATAAGGCTTGTAGCTGTTGCCACACAGAAGTTTGTTGCAGATGTTGCAAGTGATGCTCTTC
AGCATTGCAAGGCAAGACCAGCAGCAGTAGTGAAAGACAAAAGGGATAAGCAACAGAGGGATAAGCGCTTAGTATTGACGATGGAAGATCTCTCTAAGGCACTTCGTGAG
TATGGTGTAAATGTGAAACACCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATTCTACTTCCAGAGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACATAACCAACAAGCGAGTGAAAGCAGGCACGACGATGACGCAGCTCTCTCAGAGTTCTTAGCGTCTCTAATGGAGTATACTCCCACTGTTCCCGACGAATTGGT
GGAGCATTACTTAGGGAAGAGTGGATTTCAGTGTCCTAATGTACTATTGATAAGGCTTGTAGCTGTTGCCACACAGAAGTTTGTTGCAGATGTTGCAAGTGATGCTCTTC
AGCATTGCAAGGCAAGACCAGCAGCAGTAGTGAAAGACAAAAGGGATAAGCAACAGAGGGATAAGCGCTTAGTATTGACGATGGAAGATCTCTCTAAGGCACTTCGTGAG
TATGGTGTAAATGTGAAACACCAAGAATATTTTGCTGATAGCCCTTCAACTGGAGTGGATTCTACTTCCAGAGAGGAATAA
Protein sequenceShow/hide protein sequence
MRHNQQASESRHDDDAALSEFLASLMEYTPTVPDELVEHYLGKSGFQCPNVLLIRLVAVATQKFVADVASDALQHCKARPAAVVKDKRDKQQRDKRLVLTMEDLSKALRE
YGVNVKHQEYFADSPSTGVDSTSREE