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Sed0020424 (gene) of Chayote v1 genome

Gene IDSed0020424
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:13617546..13617980
RNA-Seq ExpressionSed0020424
SyntenySed0020424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64274.1 hypothetical protein Csa_013446 [Cucumis sativus]1.7e-3153.8Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVA---------APAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+GKE RS ESLCEKSMLLVANLIKLS+S+SFA+ A+NEP+   S           A  P IPGS+ LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVA---------APAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  -----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                         NVDGWASE+IE V KNR   ++S MKKP S+AK+R  RT+S
Subjt:  -----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

TYJ99125.1 hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa]3.3e-3054.78Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNE-----PST---AGSVAAPAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP------
        M+ KE RS ESLCEKSMLLVANLIKLS+S+SFAK A+NE     P+T   +G   A  P IPGS+ LQEPQSR+KPIY+TK   G FQIG+ SP      
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNE-----PST---AGSVAAPAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP------

Query:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                        NVDGWASE+IE V KNR   ++S MKKP S+AK+R  RT+S
Subjt:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

XP_022954798.1 uncharacterized protein LOC111456949 [Cucurbita moschata]1.0e-3158.75Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+GKE RS+ESLCEKSMLLVANLIKLS+S+SFAK A+    TAGS AA       PA  P IPGSR LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  -------------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                           NVDGWASE+IE V KNR  LDES  KKPYSIA++RL R SS
Subjt:  -------------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

XP_022994676.1 uncharacterized protein LOC111490318 [Cucurbita maxima]2.3e-3159.24Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+ KE RS+ESLCEKSMLLVANLIKLS+S+SFAK A+    TAGS AA       PA  P IPGSR LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                        NVDGWASE+IE V KNR  LDES  KKPYSIA++RL R SS
Subjt:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

XP_023541667.1 uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo]3.9e-3158.13Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+GKE RS+ESLCEKSMLLVANLIKLS+S+SFAK A+    TAGS AA       PA  P IPGSR LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  -------------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                           NVDGWASE+IE V KNR  LDES  KKPY IA++RL R SS
Subjt:  -------------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

TrEMBL top hitse value%identityAlignment
A0A0A0LTD3 Uncharacterized protein8.4e-3253.8Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVA---------APAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+GKE RS ESLCEKSMLLVANLIKLS+S+SFA+ A+NEP+   S           A  P IPGS+ LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVA---------APAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  -----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                         NVDGWASE+IE V KNR   ++S MKKP S+AK+R  RT+S
Subjt:  -----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

A0A5D3BLA2 Uncharacterized protein1.6e-3054.78Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNE-----PST---AGSVAAPAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP------
        M+ KE RS ESLCEKSMLLVANLIKLS+S+SFAK A+NE     P+T   +G   A  P IPGS+ LQEPQSR+KPIY+TK   G FQIG+ SP      
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNE-----PST---AGSVAAPAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP------

Query:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                        NVDGWASE+IE V KNR   ++S MKKP S+AK+R  RT+S
Subjt:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

A0A6J1E7B0 uncharacterized protein LOC1114314595.8e-2549.38Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVA---------APAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+GKE RS+ESLCEKSMLL+ANLIKLS+S+SFA  A+   +TAG+ A         A  P IPGSR LQEPQSR+KPIY+TK   G FQI + SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVA---------APAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  ------------------NVDGWASEFIETVRKNRNKLDE-SAMKKPYSIAKTRLPRTSS
                          NVDGWAS++IE V +NR   D+    +KPYS+ K RL   +S
Subjt:  ------------------NVDGWASEFIETVRKNRNKLDE-SAMKKPYSIAKTRLPRTSS

A0A6J1GS37 uncharacterized protein LOC1114569494.9e-3258.75Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+GKE RS+ESLCEKSMLLVANLIKLS+S+SFAK A+    TAGS AA       PA  P IPGSR LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  -------------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                           NVDGWASE+IE V KNR  LDES  KKPYSIA++RL R SS
Subjt:  -------------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

A0A6J1JZU4 uncharacterized protein LOC1114903181.1e-3159.24Show/hide
Query:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----
        M+ KE RS+ESLCEKSMLLVANLIKLS+S+SFAK A+    TAGS AA       PA  P IPGSR LQEPQSR+KPIY+TK   G FQIG+ SP     
Subjt:  MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAA-------PA--PAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESP-----

Query:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS
                        NVDGWASE+IE V KNR  LDES  KKPYSIA++RL R SS
Subjt:  ----------------NVDGWASEFIETVRKNRNKLDESAMKKPYSIAKTRLPRTSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGTAAAGAAGGAAGATCCAACGAATCGCTATGCGAGAAATCGATGCTGTTAGTAGCCAATTTAATCAAGCTTTCCACCTCTGTTTCTTTTGCCAAGCCGGCCCA
CAACGAACCGAGTACTGCTGGATCCGTGGCGGCGCCGGCGCCGGCGATTCCGGGAAGTAGGCTGCTGCAGGAGCCGCAGAGCCGATCGAAGCCGATCTACTTGACCAAGC
AGAGAGACGGCAAATTCCAAATTGGCTATGAATCGCCGAATGTGGATGGCTGGGCGTCCGAGTTTATAGAGACAGTTCGTAAGAACAGGAACAAATTGGACGAATCGGCG
ATGAAAAAGCCGTATTCAATCGCCAAAACTCGCCTGCCAAGAACCTCCTCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
GCACCACAAATTTATCTCTGTTTCTTCATTCCAATCCAATTTCCAGCCATGATGGGTAAAGAAGGAAGATCCAACGAATCGCTATGCGAGAAATCGATGCTGTTAGTAGC
CAATTTAATCAAGCTTTCCACCTCTGTTTCTTTTGCCAAGCCGGCCCACAACGAACCGAGTACTGCTGGATCCGTGGCGGCGCCGGCGCCGGCGATTCCGGGAAGTAGGC
TGCTGCAGGAGCCGCAGAGCCGATCGAAGCCGATCTACTTGACCAAGCAGAGAGACGGCAAATTCCAAATTGGCTATGAATCGCCGAATGTGGATGGCTGGGCGTCCGAG
TTTATAGAGACAGTTCGTAAGAACAGGAACAAATTGGACGAATCGGCGATGAAAAAGCCGTATTCAATCGCCAAAACTCGCCTGCCAAGAACCTCCTCTGTTTAA
Protein sequenceShow/hide protein sequence
MMGKEGRSNESLCEKSMLLVANLIKLSTSVSFAKPAHNEPSTAGSVAAPAPAIPGSRLLQEPQSRSKPIYLTKQRDGKFQIGYESPNVDGWASEFIETVRKNRNKLDESA
MKKPYSIAKTRLPRTSSV