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Sed0020450 (gene) of Chayote v1 genome

Gene IDSed0020450
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein 1
Genome locationLG09:38765707..38767155
RNA-Seq ExpressionSed0020450
SyntenySed0020450
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058773.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]1.4e-2064.65Show/hide
Query:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN
        MAS Q+ L H++ E V +AQVK++E++N+ + ++QSA QTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +NTSNP ++  TNNP   PSN
Subjt:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN

XP_004136082.1 late embryogenesis abundant protein 2 [Cucumis sativus]1.1e-2066.02Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTS-----NPA-ASTNNPNMG
        MAS Q+L H++DE+V +AQVKR+E++N+ +T +Q SAAQTAT+LKDQAA+F+QQTGEQ+KNMAQGAAEAVKNTLGMN +NTS     NPA  S NNP   
Subjt:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTS-----NPA-ASTNNPNMG

Query:  PSN
        P+N
Subjt:  PSN

XP_008461082.1 PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]1.4e-2064.65Show/hide
Query:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN
        MAS Q+ L H++ E V +AQVK++E++N+ + ++QSA QTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +NTSNP ++  TNNP   PSN
Subjt:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN

XP_022964497.1 late embryogenesis abundant protein 1 [Cucurbita moschata]6.8e-2059.26Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-------------SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAST
        MASQQ++ H   E V +AQVK++E++N+A+ + Q             SAAQTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +++SN AA+T
Subjt:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-------------SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAST

Query:  NNPNMGPS
        NNP   PS
Subjt:  NNPNMGPS

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]6.2e-2160.55Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILN-----------KASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTNN
        MAS Q++ H++ E+V +AQVK++EILN           KAST++QS AQTA+ LKDQAANF+QQTGEQ+KNMAQGAA+AVKNTLGMN +NT N    TNN
Subjt:  MASQQELRHQSDEMVAEAQVKREEILN-----------KASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTNN

Query:  PNMGPSNRV
        P   PS R+
Subjt:  PNMGPSNRV

TrEMBL top hitse value%identityAlignment
A0A0A0K8V2 Uncharacterized protein5.1e-2166.02Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTS-----NPA-ASTNNPNMG
        MAS Q+L H++DE+V +AQVKR+E++N+ +T +Q SAAQTAT+LKDQAA+F+QQTGEQ+KNMAQGAAEAVKNTLGMN +NTS     NPA  S NNP   
Subjt:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTS-----NPA-ASTNNPNMG

Query:  PSN
        P+N
Subjt:  PSN

A0A1S3CF46 late embryogenesis abundant protein 16.7e-2164.65Show/hide
Query:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN
        MAS Q+ L H++ E V +AQVK++E++N+ + ++QSA QTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +NTSNP ++  TNNP   PSN
Subjt:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN

A0A5D3CF20 Late embryogenesis abundant protein 16.7e-2164.65Show/hide
Query:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN
        MAS Q+ L H++ E V +AQVK++E++N+ + ++QSA QTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +NTSNP ++  TNNP   PSN
Subjt:  MASQQE-LRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAS--TNNPNMGPSN

A0A6J1HHY8 late embryogenesis abundant protein 13.3e-2059.26Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-------------SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAST
        MASQQ++ H   E V +AQVK++E++N+A+ + Q             SAAQTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +++SN AA+T
Subjt:  MASQQELRHQSDEMVAEAQVKREEILNKASTNEQ-------------SAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAST

Query:  NNPNMGPS
        NNP   PS
Subjt:  NNPNMGPS

A0A6J1KJU5 late embryogenesis abundant protein 13.3e-2058.33Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILNKAST-------------NEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAST
        MASQQ++ H   E+V +AQVK++E++N+A+              ++ SAAQTA++LKDQAANF+QQTGEQ+KNMAQGAAEAVKNTLGMN +++SN AA+T
Subjt:  MASQQELRHQSDEMVAEAQVKREEILNKAST-------------NEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAAST

Query:  NNPNMGPS
        NNP   PS
Subjt:  NNPNMGPS

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 14.2e-0437.93Show/hide
Query:  ASQQELRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTN
        A++ + +  ++    +AQ        K S   QS  +TA   KD +A F+QQTGE++K MAQGA +AVK T GM N++       TN
Subjt:  ASQQELRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTN

O49817 Late embryogenesis abundant protein 27.1e-0437.93Show/hide
Query:  ASQQELRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTN
        A++ + +  +     +AQ        K S   QS  +TA   KD +A F+QQTGE+ K MAQGA +AVK T GM N++       TN
Subjt:  ASQQELRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTN

Arabidopsis top hitse value%identityAlignment
AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related3.4e-0942.73Show/hide
Query:  MASQQELRHQSDEMVAEAQVKREEILNKAS----------TNEQSAA-----QTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMN--NENTSNP
        M+S Q+L H + E+  + Q+K+EE LN  S          T+ QS       Q    L  QA++ IQQTG Q+KNMAQGAA+AVKNTLGM+    + S+P
Subjt:  MASQQELRHQSDEMVAEAQVKREEILNKAS----------TNEQSAA-----QTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMN--NENTSNP

Query:  AASTNNPNMG
        A +T +   G
Subjt:  AASTNNPNMG

AT4G13560.1 Late embryogenesis abundant protein (LEA) family protein3.9e-0548.08Show/hide
Query:  NKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNE
        +K +    SA ++A   ++QAA    QTGE +KNMAQGA + VKN+LGMN +
Subjt:  NKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCAACAAGAACTTAGACACCAGAGTGATGAGATGGTTGCTGAAGCTCAGGTGAAGAGGGAGGAGATTTTGAACAAGGCATCTACAAATGAGCAATCAGCTGC
TCAAACTGCCACTGAACTCAAGGACCAAGCTGCAAATTTCATTCAACAGACTGGAGAGCAAATGAAGAACATGGCACAAGGAGCAGCTGAGGCAGTGAAGAATACACTTG
GAATGAACAATGAGAACACTTCAAACCCAGCAGCCTCTACCAACAACCCAAACATGGGCCCATCCAATAGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCCAACAAGAACTTAGACACCAGAGTGATGAGATGGTTGCTGAAGCTCAGGTGAAGAGGGAGGAGATTTTGAACAAGGCATCTACAAATGAGCAATCAGCTGC
TCAAACTGCCACTGAACTCAAGGACCAAGCTGCAAATTTCATTCAACAGACTGGAGAGCAAATGAAGAACATGGCACAAGGAGCAGCTGAGGCAGTGAAGAATACACTTG
GAATGAACAATGAGAACACTTCAAACCCAGCAGCCTCTACCAACAACCCAAACATGGGCCCATCCAATAGAGTTTAA
Protein sequenceShow/hide protein sequence
MASQQELRHQSDEMVAEAQVKREEILNKASTNEQSAAQTATELKDQAANFIQQTGEQMKNMAQGAAEAVKNTLGMNNENTSNPAASTNNPNMGPSNRV