; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020456 (gene) of Chayote v1 genome

Gene IDSed0020456
OrganismSechium edule (Chayote v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG01:9352530..9353180
RNA-Seq ExpressionSed0020456
SyntenySed0020456
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR007527 - Zinc finger, SWIM-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039903 - E3 ubiquitin-protein ligase Zswim2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148392.1 mitogen-activated protein kinase kinase kinase 1 [Cucumis sativus]1.1e-9175.34Show/hide
Query:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL
        MES A TSS P+   R+KPSQ VADRIVRALHH LRLLH S S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+Y++ LG+ LDD CLRRRTL 
Subjt:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL

Query:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA-------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCV
        PCQLN LLAAP++L+SLAEIGLR++FHQQFF V +RA       SV V DMEDG+ CPVCLDDMKKKDRVVAC+TCRN+VHE+CF RWKRSKGRR VSCV
Subjt:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA-------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCV

Query:  VCRARWEDTATDQQKYLNLSAYV
        VCRARW+DT  +QQKYLNLSAY+
Subjt:  VCRARWEDTATDQQKYLNLSAYV

XP_022131540.1 uncharacterized protein LOC111004703 [Momordica charantia]9.6e-9176.13Show/hide
Query:  MESGAYTSSRPYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR
        MES A TSS P  PR    R+KPSQAVADRIVRALHH LRLLH SDS F+VLGATGNVYIVSLS+TP+C+CPD ITPCKHILF+YIR LGV LDD CLRR
Subjt:  MESGAYTSSRPYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR

Query:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKK--KDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV
        RTL PC LN LL AP++LES+A IG+RR+FHQ+FF VK RAS  VVD+EDGTTCPVCLD+MKK   DRVVAC TCRN+VHE+CF RWKRSKGRR+VSCVV
Subjt:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKK--KDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV

Query:  CRARWEDTATDQQKYLNLSAYV
        CRARW DT + Q+KYLNLSAY+
Subjt:  CRARWEDTATDQQKYLNLSAYV

XP_023521856.1 uncharacterized protein LOC111785706 [Cucurbita pepo subsp. pepo]8.1e-9077.83Show/hide
Query:  MESGAYTSSR-PYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLR
        MES A TSS  P  PR    R+KPSQAVADRIVRALHH L LL+ S+S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+YIR LG+ LDD CLR
Subjt:  MESGAYTSSR-PYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLR

Query:  RRTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVC
        RRTL PCQLN LLAAP++LESLAEIG+RRIFHQQFF VKER S   V +E+GT CPVCLDDMKK DRVVAC+TCRN+VHE+CF+RWKRSKGRR VSCVVC
Subjt:  RRTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVC

Query:  RARWEDTATDQQKYLNLSAYV
        RARW++T TDQQKYLNLSAYV
Subjt:  RARWEDTATDQQKYLNLSAYV

XP_023546870.1 uncharacterized protein LOC111805851 [Cucurbita pepo subsp. pepo]8.1e-9077.83Show/hide
Query:  MESGAYTSSR-PYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLR
        MES A TSS  P  PR    R+KPSQAVADRIVRALHH L LL+ S+S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+YIR LG+ LDD CLR
Subjt:  MESGAYTSSR-PYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLR

Query:  RRTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVC
        RRTL PCQLN LLAAP++LESLAEIG+RRIFHQQFF VKER S   V +E+GT CPVCLDDMKK DRVVAC+TCRN+VHE+CF+RWKRSKGRR VSCVVC
Subjt:  RRTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVC

Query:  RARWEDTATDQQKYLNLSAYV
        RARW++T TDQQKYLNLSAYV
Subjt:  RARWEDTATDQQKYLNLSAYV

XP_038885291.1 uncharacterized protein LOC120075728 [Benincasa hispida]1.1e-9479.63Show/hide
Query:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL
        MES A TSS  + P R+KPS AVADRIVRALHH LRLLH S S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+Y++ LG+ LDD CLRRRTL 
Subjt:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL

Query:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVCRARWE
        PCQLN LLAAP++L+SLAE+GLR +FHQQFF VKERASV VVDMEDGTTCPVCLDDMKKKDRVVAC+TCRN+VHE+CF+RWKRSKGRR+VSCVVCRARW+
Subjt:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVCRARWE

Query:  DTATDQQKYLNLSAYV
        D   DQQKYLNLSAY+
Subjt:  DTATDQQKYLNLSAYV

TrEMBL top hitse value%identityAlignment
A0A0A0LS10 SWIM-type domain-containing protein5.5e-9275.34Show/hide
Query:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL
        MES A TSS P+   R+KPSQ VADRIVRALHH LRLLH S S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+Y++ LG+ LDD CLRRRTL 
Subjt:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL

Query:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA-------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCV
        PCQLN LLAAP++L+SLAEIGLR++FHQQFF V +RA       SV V DMEDG+ CPVCLDDMKKKDRVVAC+TCRN+VHE+CF RWKRSKGRR VSCV
Subjt:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA-------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCV

Query:  VCRARWEDTATDQQKYLNLSAYV
        VCRARW+DT  +QQKYLNLSAY+
Subjt:  VCRARWEDTATDQQKYLNLSAYV

A0A1S4DW96 uncharacterized protein LOC1034881771.5e-8975.23Show/hide
Query:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL
        MES A TSS    P R+KPSQ VADRIVRALHH LRLLH S S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+Y++ LG+ LDD CLRRRTL 
Subjt:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL

Query:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV
        PCQLN LLAAP++L+SLAEIGLR++FHQQFF V +RA       V V DMEDGT CPVCLDDMKK DRVVAC+TCRN+VHE+CF RWKRSKGRR VSCVV
Subjt:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV

Query:  CRARWEDTATDQQKYLNLSAYV
        CRARW+DT  D+QKYLNLSAY+
Subjt:  CRARWEDTATDQQKYLNLSAYV

A0A5A7VCN6 SWIM-type domain-containing protein1.5e-8975.23Show/hide
Query:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL
        MES A TSS    P R+KPSQ VADRIVRALHH LRLLH S S F+VLGATGNVYIVSLSSTP+C CPD ITPCKHILF+Y++ LG+ LDD CLRRRTL 
Subjt:  MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLL

Query:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV
        PCQLN LLAAP++L+SLAEIGLR++FHQQFF V +RA       V V DMEDGT CPVCLDDMKK DRVVAC+TCRN+VHE+CF RWKRSKGRR VSCVV
Subjt:  PCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERA------SVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV

Query:  CRARWEDTATDQQKYLNLSAYV
        CRARW+DT  D+QKYLNLSAY+
Subjt:  CRARWEDTATDQQKYLNLSAYV

A0A6J1BPZ4 uncharacterized protein LOC1110047034.6e-9176.13Show/hide
Query:  MESGAYTSSRPYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR
        MES A TSS P  PR    R+KPSQAVADRIVRALHH LRLLH SDS F+VLGATGNVYIVSLS+TP+C+CPD ITPCKHILF+YIR LGV LDD CLRR
Subjt:  MESGAYTSSRPYCPR----RYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR

Query:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKK--KDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV
        RTL PC LN LL AP++LES+A IG+RR+FHQ+FF VK RAS  VVD+EDGTTCPVCLD+MKK   DRVVAC TCRN+VHE+CF RWKRSKGRR+VSCVV
Subjt:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKK--KDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVV

Query:  CRARWEDTATDQQKYLNLSAYV
        CRARW DT + Q+KYLNLSAY+
Subjt:  CRARWEDTATDQQKYLNLSAYV

A0A6J1GJ16 mitogen-activated protein kinase kinase kinase 11.1e-8774.55Show/hide
Query:  MESGAYTSSRPYCPRR----YKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR
        MES A TSS P  PR     ++PSQA+  RIVRALHH LRLLH SDS+F+VLGATGNVYIVSLSSTP+C CPD ITPCKH+LFVYIR LGV LDD CL R
Subjt:  MESGAYTSSRPYCPRR----YKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR

Query:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVCR
        RTL PCQLN LL APV+ ESLAEI LRR+FHQQFF VKER  V +VD+EDG  CPVCLDD+ K DRVVACTTCRN+VH++CF+RWKRSKGRR +SCVVCR
Subjt:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVCR

Query:  ARWEDTATDQQKYLNLSAYV
        ARW+DT T++QKYLNLSAY+
Subjt:  ARWEDTATDQQKYLNLSAYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46493.1 RING/U-box superfamily protein7.2e-0423.58Show/hide
Query:  ILFVYIRVLGVLLDDECLRRRTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQ---QFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIV
        +L + +  + V +   C+  R     + +  +AA  +++   E+  RR   Q   + F   E      +   +G  CP+CL +   K+ V     C +  
Subjt:  ILFVYIRVLGVLLDDECLRRRTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQ---QFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIV

Query:  HEECFARWKRSKGRRTVSCVVCR
        H EC   W +  G    SC +CR
Subjt:  HEECFARWKRSKGRRTVSCVVCR

AT5G11620.1 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related5.3e-4742.25Show/hide
Query:  MESGAYTSSRPYC---PRRYKPSQAVADRIVRALHHDLRLLHCSDS-TFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR
        MES       PY     +R+  +Q VADRI+RAL H +RLLH  ++ TF+VLGAT NVY V+L +TP C CPD   PCKHILFV IRVLG+ LDD+CLR+
Subjt:  MESGAYTSSRPYC---PRRYKPSQAVADRIVRALHHDLRLLHCSDS-TFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRR

Query:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQF--------FHVKERASVIVVDM---EDGTTCPVCLDDM--------------KKKDRVVACTTCRN
        R L  C L HL +AP   + LA   L++ F Q F        +     +S   ++    E+  TCP+CLDD+              +K+  VV C  C+N
Subjt:  RTLLPCQLNHLLAAPVLLESLAEIGLRRIFHQQF--------FHVKERASVIVVDM---EDGTTCPVCLDDM--------------KKKDRVVACTTCRN

Query:  IVHEECFARWKRSKGRRTVSCVVCRARWEDTATDQQK-------------YLNLSAYV
         VH+EC   W++S+GRR   CVVCRARW    + +               YLNL+ YV
Subjt:  IVHEECFARWKRSKGRRTVSCVVCRARWEDTATDQQK-------------YLNLSAYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTGGTGCCTATACTTCATCCCGACCCTACTGCCCCCGTCGATACAAACCATCCCAAGCTGTGGCTGACAGGATTGTTCGAGCTCTCCACCATGACCTCCGTCT
CCTCCACTGCTCCGATTCTACTTTCTATGTGTTGGGAGCCACAGGCAATGTCTACATCGTGTCTCTATCCTCAACCCCTGCGTGCAATTGCCCTGACCATATTACTCCAT
GTAAACACATACTGTTTGTTTACATTCGAGTCCTGGGCGTGTTGTTGGATGACGAATGCCTTCGGCGGAGAACACTTCTACCTTGCCAATTGAATCACTTGCTTGCTGCA
CCTGTTTTGCTTGAATCATTGGCTGAAATTGGTCTACGTAGAATATTTCATCAACAATTCTTTCATGTAAAGGAAAGGGCTTCTGTGATTGTGGTAGATATGGAAGATGG
AACTACTTGTCCAGTTTGTTTGGATGATATGAAGAAGAAGGATCGGGTTGTGGCGTGTACGACATGTCGGAATATTGTTCACGAAGAGTGTTTCGCGAGGTGGAAACGAA
GCAAGGGAAGGAGAACAGTTAGTTGCGTGGTGTGTAGGGCAAGGTGGGAAGATACAGCAACAGACCAACAAAAGTATTTGAATTTGTCTGCGTATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTGGTGCCTATACTTCATCCCGACCCTACTGCCCCCGTCGATACAAACCATCCCAAGCTGTGGCTGACAGGATTGTTCGAGCTCTCCACCATGACCTCCGTCT
CCTCCACTGCTCCGATTCTACTTTCTATGTGTTGGGAGCCACAGGCAATGTCTACATCGTGTCTCTATCCTCAACCCCTGCGTGCAATTGCCCTGACCATATTACTCCAT
GTAAACACATACTGTTTGTTTACATTCGAGTCCTGGGCGTGTTGTTGGATGACGAATGCCTTCGGCGGAGAACACTTCTACCTTGCCAATTGAATCACTTGCTTGCTGCA
CCTGTTTTGCTTGAATCATTGGCTGAAATTGGTCTACGTAGAATATTTCATCAACAATTCTTTCATGTAAAGGAAAGGGCTTCTGTGATTGTGGTAGATATGGAAGATGG
AACTACTTGTCCAGTTTGTTTGGATGATATGAAGAAGAAGGATCGGGTTGTGGCGTGTACGACATGTCGGAATATTGTTCACGAAGAGTGTTTCGCGAGGTGGAAACGAA
GCAAGGGAAGGAGAACAGTTAGTTGCGTGGTGTGTAGGGCAAGGTGGGAAGATACAGCAACAGACCAACAAAAGTATTTGAATTTGTCTGCGTATGTTTGA
Protein sequenceShow/hide protein sequence
MESGAYTSSRPYCPRRYKPSQAVADRIVRALHHDLRLLHCSDSTFYVLGATGNVYIVSLSSTPACNCPDHITPCKHILFVYIRVLGVLLDDECLRRRTLLPCQLNHLLAA
PVLLESLAEIGLRRIFHQQFFHVKERASVIVVDMEDGTTCPVCLDDMKKKDRVVACTTCRNIVHEECFARWKRSKGRRTVSCVVCRARWEDTATDQQKYLNLSAYV