; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020471 (gene) of Chayote v1 genome

Gene IDSed0020471
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG01:3134230..3134799
RNA-Seq ExpressionSed0020471
SyntenySed0020471
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605223.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4152.74Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-
        MS  F D+L FQ  F  N    +AS E PMQFVELRL  SS L++RSS Q+LQQTP T + +ALF F L  L   PPFLS S++++F+S  ++PIAVC+ 
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-

Query:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF L  AAGDV L FHIV  VD +E  WV++ P      SP A   APA+AIER + ++F+   E EE GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

XP_022947840.1 probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata]3.2e-4253.5Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-
        MS  F D+L FQ  F  N    +AS E PMQFVELRL  SS L++RSS Q+LQQTP T + +ALF F L  L   PPFLS S++++FLS  ++PIAVC+ 
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-

Query:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE-LELEEMGDCSVCCDELDGEREVTRIPCGHVFH
             +SF L  AAG+V L+FHIV  VD +E  WV++ P      SP A  GAPA+AIER + Q+F+ L  EE G+CSVCC+ L GE EV+RIPCGHV+H
Subjt:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE-LELEEMGDCSVCCDELDGEREVTRIPCGHVFH

XP_022947933.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita moschata]1.4e-4051.74Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--
        MS  F+D L FQ    +  +  VAS + PMQ +ELRL  S+ L++RSS Q+LQQTP T + +ALF F L  LQ  PPFLSN  ++QFLS  ++PIA C  
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--

Query:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF L+ AAG+V L+FHIV  VD +E  WV++ P      SPA   GAPA+AIER + Q+F+   E EE GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

XP_023006826.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita maxima]1.0e-4052.24Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--
        MS  F+D L FQ    +  +  VASG+ P+Q +ELRL  S+ L++RSS Q+LQQTP T I +ALF F L  LQ  PPFLSN  ++QFLS  ++PIA C  
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--

Query:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF L+ AAG++ L+FHIV  VD  E  WV++ P      SPA   GAPA+AIER + QKF+   E EE GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

XP_023533113.1 RING-H2 finger protein ATL1-like [Cucurbita pepo subsp. pepo]6.5e-4354.23Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-
        MS  F D+L FQ  F  N    +AS E PMQFVELRL  SS L++RSS Q+LQQTP T + +ALF F L  L   PPFLS S++++FLS   +PIAVC+ 
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-

Query:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF L  AAG+V L+FHIV  VD +E  WV++ P      SPAA  GAPA+AIER + QKF+   E E+ GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A6J1G7Z5 E3 ubiquitin-protein ligase RNF126-like6.6e-4151.74Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--
        MS  F+D L FQ    +  +  VAS + PMQ +ELRL  S+ L++RSS Q+LQQTP T + +ALF F L  LQ  PPFLSN  ++QFLS  ++PIA C  
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--

Query:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF L+ AAG+V L+FHIV  VD +E  WV++ P      SPA   GAPA+AIER + Q+F+   E EE GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

A0A6J1G809 probable E3 ubiquitin-protein ligase RHA4A1.6e-4253.5Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-
        MS  F D+L FQ  F  N    +AS E PMQFVELRL  SS L++RSS Q+LQQTP T + +ALF F L  L   PPFLS S++++FLS  ++PIAVC+ 
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH-

Query:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE-LELEEMGDCSVCCDELDGEREVTRIPCGHVFH
             +SF L  AAG+V L+FHIV  VD +E  WV++ P      SP A  GAPA+AIER + Q+F+ L  EE G+CSVCC+ L GE EV+RIPCGHV+H
Subjt:  ---NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE-LELEEMGDCSVCCDELDGEREVTRIPCGHVFH

A0A6J1G826 E3 ubiquitin-protein ligase RNF38-like3.2e-3546.04Show/hide
Query:  MSFEFNDALFFQFCANR---HRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH
        MS   +D L +Q C+ R   +  + S E PMQ +ELR+  S  L++RSSHQ+LQ++P T + +ALF F +L+ Q  PPFL NS++++FLS   +PI  C+
Subjt:  MSFEFNDALFFQFCANR---HRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCH

Query:  ----NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHV
              +SF     A DVHL+FH+V  V+  E  WV++ P     +SP    GAPA+AIER + Q+F    E EE GDCSVCC+ L GE E +RIPCGHV
Subjt:  ----NTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHV

Query:  FH
        +H
Subjt:  FH

A0A6J1KYV1 E3 ubiquitin-protein ligase RNF126-like5.0e-4152.24Show/hide
Query:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--
        MS  F+D L FQ    +  +  VASG+ P+Q +ELRL  S+ L++RSS Q+LQQTP T I +ALF F L  LQ  PPFLSN  ++QFLS  ++PIA C  
Subjt:  MSFEFNDALFFQ--FCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--

Query:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF L+ AAG++ L+FHIV  VD  E  WV++ P      SPA   GAPA+AIER + QKF+   E EE GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

A0A6J1L387 RING-H2 finger protein ATL16-like8.6e-4151.24Show/hide
Query:  MSFEFNDALFFQFC--ANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--
        MS  F D+L FQF    N    +AS E PMQFVELRL  SS L++RSS Q+LQQ+P T +  +LF F L  L+  PPFL N +++ FLS  ++P+A C  
Subjt:  MSFEFNDALFFQFC--ANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVC--

Query:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF
             +SF LR  A +V L+FHIV  VD +E  WV++ P      SP A  GAPA+AIER + QKF+   E EE GDCSVCC+ L GE EV+RIPCGHV+
Subjt:  --HNTASFDLRFAAGDVHLSFHIVATVDFVETFWVEMGPV----DSPAAGRGAPATAIERQRNQKFE--LELEEMGDCSVCCDELDGEREVTRIPCGHVF

Query:  H
        H
Subjt:  H

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCGAGTTCAACGACGCTCTGTTTTTCCAATTTTGCGCCAATCGGCACCGCCCAGTGGCTTCCGGCGAGCCACCGATGCAGTTCGTTGAACTCCGATTACGACA
ATCCAGCCTTCTAGTAACTCGATCTTCTCACCAAATGCTCCAACAAACTCCCCCAACTCTGATCACCAATGCTCTGTTTTTATTTCCTCTGCTCCAACTCCAAAGCCCAC
CGCCGTTCCTCTCGAATTCCAACATGGTTCAGTTTCTATCTTACCACAACCTCCCCATCGCCGTCTGTCACAACACCGCCTCATTCGACCTCCGCTTCGCCGCCGGCGAC
GTCCACCTCAGCTTCCACATCGTCGCCACCGTGGATTTCGTCGAAACGTTCTGGGTGGAAATGGGTCCGGTAGATTCTCCGGCGGCGGGGAGAGGGGCGCCGGCGACGGC
GATTGAGAGGCAGAGGAATCAGAAATTTGAATTGGAATTGGAAGAGATGGGAGATTGCAGTGTTTGCTGCGATGAACTCGATGGCGAAAGGGAGGTGACGAGAATCCCCT
GCGGCCACGTGTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCGAGTTCAACGACGCTCTGTTTTTCCAATTTTGCGCCAATCGGCACCGCCCAGTGGCTTCCGGCGAGCCACCGATGCAGTTCGTTGAACTCCGATTACGACA
ATCCAGCCTTCTAGTAACTCGATCTTCTCACCAAATGCTCCAACAAACTCCCCCAACTCTGATCACCAATGCTCTGTTTTTATTTCCTCTGCTCCAACTCCAAAGCCCAC
CGCCGTTCCTCTCGAATTCCAACATGGTTCAGTTTCTATCTTACCACAACCTCCCCATCGCCGTCTGTCACAACACCGCCTCATTCGACCTCCGCTTCGCCGCCGGCGAC
GTCCACCTCAGCTTCCACATCGTCGCCACCGTGGATTTCGTCGAAACGTTCTGGGTGGAAATGGGTCCGGTAGATTCTCCGGCGGCGGGGAGAGGGGCGCCGGCGACGGC
GATTGAGAGGCAGAGGAATCAGAAATTTGAATTGGAATTGGAAGAGATGGGAGATTGCAGTGTTTGCTGCGATGAACTCGATGGCGAAAGGGAGGTGACGAGAATCCCCT
GCGGCCACGTGTTTCATTAA
Protein sequenceShow/hide protein sequence
MSFEFNDALFFQFCANRHRPVASGEPPMQFVELRLRQSSLLVTRSSHQMLQQTPPTLITNALFLFPLLQLQSPPPFLSNSNMVQFLSYHNLPIAVCHNTASFDLRFAAGD
VHLSFHIVATVDFVETFWVEMGPVDSPAAGRGAPATAIERQRNQKFELELEEMGDCSVCCDELDGEREVTRIPCGHVFH