CuGenDBv2

Gene ID	Sed0020493
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Genome location	LG12:2509672..2510586
RNA-Seq Expression	Sed0020493
Synteny	Sed0020493
Gene Ontology terms	GO:0060320 - rejection of self pollen (biological process) GO:0005576 - extracellular region (cellular component)
InterPro domains	IPR010264 - Plant self-incompatibility S1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7018836.1 Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-71

90.85

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL++ILMLI FPFFTVFMSL+ PEQLYG+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPV+TNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA RKC+WLV+EDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

TYK17379.1 self-incompatibility family protein [Cucumis melo var. makuwa]

7.2e-71

91.55

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL++ILMLIFFPFFTVF+SL+  EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_004134017.2 S-protein homolog 6 [Cucumis sativus]

1.8e-69

90.91

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL++ILMLIFFPFFTVF+SL+  EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_022949667.1 S-protein homolog 5 [Cucurbita moschata]

1.6e-70

90.85

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILI+ILMLIFFPFFTVFMSL+ P+ LYG+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SF
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA+RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

XP_038876719.1 S-protein homolog 6-like [Benincasa hispida]

9.4e-71

91.55

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILI+ILMLIFFPFF+VF+SL+  EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6V3 S-protein homolog

1.2e-60

94.07

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Query:  EQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSAYRKCSWLVME
        EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSA RKCSWLVME
Subjt:  EQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSAYRKCSWLVME

Query:  DGFYFSDDEVNWKKDFSW
        DGFYFSDDEVNWKKDFSW
Subjt:  DGFYFSDDEVNWKKDFSW

A0A1S4DSD2 S-protein homolog

8.6e-70

90.91

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL++ILMLIFFPFFTVF+SL+  EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5A7U6C9 S-protein homolog

8.6e-70

90.91

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS
        MKIL++ILMLIFFPFFTVF+SL+  EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKS
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKS

Query:  FDAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        FDAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  FDAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A5D3D3G0 S-protein homolog

3.5e-71

91.55

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKIL++ILMLIFFPFFTVF+SL+  EQL+G+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA RKCSWLVMEDGFYFSDDEVNWKKDFSW
Subjt:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

A0A6J1GCS3 S-protein homolog

7.8e-71

90.85

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Query:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF
        MKILI+ILMLIFFPFFTVFMSL+ P+ LYG+EYEVRVINGFTNNSSLPLVIWC++KD DIGGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SF
Subjt:  MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSF

Query:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        DAFKVPRDIYRCSA+RKCSWLVMEDGFYFSDDEVNWKK+FSW
Subjt:  DAFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26798.1 Plant self-incompatibility protein S1 family

2.5e-05

30.47

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Query:  ILITILMLIFFPFFTVFMSLISPE-QLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFD
        I + I  L+ F     F +  S +  L      V +IN  T N    LV+ C  K  D+G  AL+  +   +  + N   TTT  ++CT       K+FD
Subjt:  ILITILMLIFFPFFTVFMSLISPE-QLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFD

Query:  AFKVPRD---IYRCSAYRKCSWLVMEDG
         F+V RD      C   R+C W + E G
Subjt:  AFKVPRD---IYRCSAYRKCSWLVMEDG

AT3G24060.1 Plant self-incompatibility protein S1 family

1.0e-38

52.48

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Query:  ILITILMLIFFPFFTVFMSLISPEQLY-GMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFD
        I++ + MLI      +F  ++ P+ ++ G E++VRVIN F +NSSLPLVIWC++   D+GGRALQE DDF W  K + W +  ++++CT+K D  RK F+
Subjt:  ILITILMLIFFPFFTVFMSLISPEQLY-GMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFD

Query:  AFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW
        AFKV RD  RC + +KCSW V EDGFYFS DEV W KDFSW
Subjt:  AFKVPRDIYRCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

Sequences

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CDS sequence

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ATGAAGATTCTCATTACCATTCTGATGCTCATCTTCTTCCCGTTCTTCACTGTTTTCATGTCATTAATATCTCCAGAGCAGCTGTATGGCATGGAATACGAAGTCCGTGT
GATCAATGGCTTCACGAACAACTCCTCACTGCCTCTGGTTATATGGTGCTCGACCAAAGACATTGATATAGGCGGGCGCGCGCTTCAGGAGCACGACGATTTCAGTTGGC
CCGTCAAGACCAACTTCTGGATTACTACAACTTCCCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGCTTTGATGCATTCAAGGTTCCAAGAGATATCTAC
CGCTGTAGTGCTTACAGGAAATGCTCTTGGTTGGTTATGGAAGATGGATTTTATTTCAGCGACGACGAAGTAAACTGGAAGAAGGACTTCTCGTGGTAA

mRNA sequence

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TTATTTTAAATTCACATTCAAATGAGATATTATTTCTAACTCTCACAAAAAAAGAAAAAACTACATTCAAATGAGTTTTTTAAGTAAAACTCTTTCACGACCACTCAACT
GTTTGCTATATATTTATCAACACTATATTTGAACAGTAAATGTGCTTTCGACTGAACTAGTGCATTCTCATCATAGAAAATACATGGTCATTGGTCTAGAACTATTAGCT
TTGTGGCAATATAAAGCTTGAGCTAGACTACCATTTTTTACCTGCATTTTACAGTTATCCACTCTCCATGAAGATTCTCATTACCATTCTGATGCTCATCTTCTTCCCGT
TCTTCACTGTTTTCATGTCATTAATATCTCCAGAGCAGCTGTATGGCATGGAATACGAAGTCCGTGTGATCAATGGCTTCACGAACAACTCCTCACTGCCTCTGGTTATA
TGGTGCTCGACCAAAGACATTGATATAGGCGGGCGCGCGCTTCAGGAGCACGACGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACTTCCCAATTCTC
ATGCACTGTCAAATTGGACCGTACAAGGAAGAGCTTTGATGCATTCAAGGTTCCAAGAGATATCTACCGCTGTAGTGCTTACAGGAAATGCTCTTGGTTGGTTATGGAAG
ATGGATTTTATTTCAGCGACGACGAAGTAAACTGGAAGAAGGACTTCTCGTGGTAAATCGCCTCACTATGACCAGCTAAGTTTACTCAACTCTGTTTTACTCTCTTCTAC
TTTTACTTTTACTGTCATGGTTTTCTATAGCGAGATTCTAGTATACTTGAGGAACGGAAAGCTATTTTGAATCATAAATATGAGTGTAGCAAAGGAATTTGAATTCCTCG
ATTTTCTTGAGAGAATGTTACCTAGTAGTTGTCAC

Protein sequence

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MKILITILMLIFFPFFTVFMSLISPEQLYGMEYEVRVINGFTNNSSLPLVIWCSTKDIDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIY
RCSAYRKCSWLVMEDGFYFSDDEVNWKKDFSW

Sed0020493 (gene) of Chayote v1 genome