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Sed0020512 (gene) of Chayote v1 genome

Gene IDSed0020512
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG12:29874460..29874687
RNA-Seq ExpressionSed0020512
SyntenySed0020512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046597.1 hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]1.1e-1251.22Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAAD----------SGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD
        MCYPH   P    R + L+ QCN VL Q   A+            S KR+CLCSPT HPGSFRCRLHRSEYVWV ++ +V++
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAAD----------SGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD

KAG6589902.1 hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1769.01Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQVA--AADSG---SVKRQCLCSPTEHPGSFRCRLHRSEYVWVGK
        MCYPHD+ P    RRE L VQCN VL Q A  A +SG   SVK++CLCSPT HPGSFRCRLHRSEYVWVG+
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQVA--AADSG---SVKRQCLCSPTEHPGSFRCRLHRSEYVWVGK

KGN65356.1 hypothetical protein Csa_020011 [Cucumis sativus]6.2e-1350Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAADSG----------SVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD
        MCYPH       SRR+  ++QCN VL Q   A+            S KR+CLCSPT HPGSFRCRLHR+EYVWV ++ +V++
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAADSG----------SVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD

PLY76495.1 hypothetical protein LSAT_4X103641 [Lactuca sativa]7.8e-0850Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQV--AAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWV
        MCYP  +        E+   +   + T V    A  G VK+QCLCSPT HPGSFRCR H SEYVWV
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQV--AAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWV

PON73298.1 hypothetical protein PanWU01x14_058020 [Parasponia andersonii]6.0e-0847.76Show/hide
Query:  HDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQ
        H LQ  MA+  E         L    AA  GSVK+ CLCSPT+HPGSFRCR H++EY W G+ + ++
Subjt:  HDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LZG6 Uncharacterized protein3.0e-1350Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAADSG----------SVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD
        MCYPH       SRR+  ++QCN VL Q   A+            S KR+CLCSPT HPGSFRCRLHR+EYVWV ++ +V++
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAADSG----------SVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD

A0A2J6KN41 Uncharacterized protein3.8e-0850Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQV--AAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWV
        MCYP  +        E+   +   + T V    A  G VK+QCLCSPT HPGSFRCR H SEYVWV
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQV--AAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWV

A0A2P5DJ33 Uncharacterized protein2.9e-0847.76Show/hide
Query:  HDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQ
        H LQ  MA+  E         L    AA  GSVK+ CLCSPT+HPGSFRCR H++EY W G+ + ++
Subjt:  HDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQ

A0A2P5F9S9 Uncharacterized protein8.5e-0846.27Show/hide
Query:  HDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQ
        H LQ  MA+  E              AA  GSVK+ CLCSPT+HPGSFRCR H++EY W G+ + ++
Subjt:  HDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQ

A0A5A7TXE6 Uncharacterized protein5.1e-1351.22Show/hide
Query:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAAD----------SGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD
        MCYPH   P    R + L+ QCN VL Q   A+            S KR+CLCSPT HPGSFRCRLHRSEYVWV ++ +V++
Subjt:  MCYPHDLQPRMASRREVLAVQCNCVLTQVAAAD----------SGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein7.1e-0748.57Show/hide
Query:  AAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWV
        +  D G  K++C+CSP++HP SF+CR H+ EY W+
Subjt:  AAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWV

AT1G67910.1 unknown protein7.8e-0638.6Show/hide
Query:  RMASRREVLAVQCNCVLTQVAAADSGSVKRQ-------CLCSPTEHPGSFRCRLHRS
        +M + + ++ V+ +          S  + RQ       CLCSPT HPGSFRCR+HRS
Subjt:  RMASRREVLAVQCNCVLTQVAAADSGSVKRQ-------CLCSPTEHPGSFRCRLHRS

AT1G67910.2 unknown protein7.8e-0638.6Show/hide
Query:  RMASRREVLAVQCNCVLTQVAAADSGSVKRQ-------CLCSPTEHPGSFRCRLHRS
        +M + + ++ V+ +          S  + RQ       CLCSPT HPGSFRCR+HRS
Subjt:  RMASRREVLAVQCNCVLTQVAAADSGSVKRQ-------CLCSPTEHPGSFRCRLHRS

AT3G13227.1 serine-rich protein-related2.7e-0663.33Show/hide
Query:  VAAADSGSVKRQCLCSPTEHPGSFRCRLHR
        V  + S SV++ CLC+PT HPGSFRCR HR
Subjt:  VAAADSGSVKRQCLCSPTEHPGSFRCRLHR

AT5G20370.1 serine-rich protein-related1.0e-0560Show/hide
Query:  VAAADSGSVKRQCLCSPTEHPGSFRCRLHR
        V  + +   KR+CLCSPT HPGSFRC  HR
Subjt:  VAAADSGSVKRQCLCSPTEHPGSFRCRLHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACCCTCATGATTTGCAGCCACGGATGGCGAGCCGAAGGGAGGTTTTGGCTGTGCAATGCAATTGTGTCCTCACGCAGGTGGCGGCGGCGGATAGTGGGTCGGT
GAAAAGGCAGTGCTTGTGCTCGCCGACCGAGCATCCAGGGTCGTTTCGTTGCAGGCTGCATCGAAGTGAGTACGTATGGGTGGGGAAGAAAATTTCTGTCCAAGATGACG
TCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTACCCTCATGATTTGCAGCCACGGATGGCGAGCCGAAGGGAGGTTTTGGCTGTGCAATGCAATTGTGTCCTCACGCAGGTGGCGGCGGCGGATAGTGGGTCGGT
GAAAAGGCAGTGCTTGTGCTCGCCGACCGAGCATCCAGGGTCGTTTCGTTGCAGGCTGCATCGAAGTGAGTACGTATGGGTGGGGAAGAAAATTTCTGTCCAAGATGACG
TCTCATAA
Protein sequenceShow/hide protein sequence
MCYPHDLQPRMASRREVLAVQCNCVLTQVAAADSGSVKRQCLCSPTEHPGSFRCRLHRSEYVWVGKKISVQDDVS