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Sed0020523 (gene) of Chayote v1 genome

Gene IDSed0020523
OrganismSechium edule (Chayote v1)
Descriptionacanthoscurrin-1-like
Genome locationLG09:27863603..27864284
RNA-Seq ExpressionSed0020523
SyntenySed0020523
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050560.1 acanthoscurrin-1-like [Cucumis melo var. makuwa]2.5e-3081.54Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTT
        MAK+F+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+GG G  GG+GGG+GG TG G G    GG GGGLGG+GGTT
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTT

Query:  AGGLGGGLGGGLGGGLGGGLGGGAGGGSGL
         GGLGGGLGGGLGGGLGGGLGGG GG SG+
Subjt:  AGGLGGGLGGGLGGGLGGGLGGGAGGGSGL

XP_008462124.1 PREDICTED: acanthoscurrin-1-like [Cucumis melo]3.9e-2881.6Show/hide
Query:  IALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLG
        +ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+GG G  GG+GGG+GG TG G G    GG GGGLGG+GGTT GGLG
Subjt:  IALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLG

Query:  GGLGGGLGGGLGGGLGGGAGGGSGL
        GGLGGGLGGGLGGGLGGG GG SG+
Subjt:  GGLGGGLGGGLGGGLGGGAGGGSGL

XP_022960398.1 acanthoscurrin-1-like [Cucurbita moschata]1.9e-3082.71Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGG--GLGGGL--GGLGGTTA
        MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGG  G G GG  GLGGGL  GGLGGT  
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGG--GLGGGL--GGLGGTTA

Query:  GG-LGGGLGGGLGGGLGGGLGG--GAGGGSGLP
        GG LGGGLGG +GGGLGGGLGG  G GGGSGLP
Subjt:  GG-LGGGLGGGLGGGLGGGLGG--GAGGGSGLP

XP_023004890.1 acanthoscurrin-1-like [Cucurbita maxima]7.2e-3078.26Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGF-----TGTGMGGGLGGGL------G
        MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGG       G G+GGGLGGGL      G
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGF-----TGTGMGGGLGGGL------G

Query:  GLGGTTAGG-LGGGLGGGLGGGLGGGLGGGAGGGSGLP
        GLGGT  GG LGGGLGG +GGGLGGG+GG  GGGSGLP
Subjt:  GLGGTTAGG-LGGGLGGGLGGGLGGGLGGGAGGGSGLP

XP_023514578.1 acanthoscurrin-1-like [Cucurbita pepo subsp. pepo]9.4e-3081.54Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGGGLGG---GLGGLGGTTAG
        MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGG  G G GGG GG   G GGLGGT  G
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGGGLGG---GLGGLGGTTAG

Query:  G-LGGGLGGGLGGGLGGGLGGGAGGGSGLP
        G LGGGLGG +GGGLGGG+GG  GGGSGLP
Subjt:  G-LGGGLGGGLGGGLGGGLGGGAGGGSGLP

TrEMBL top hitse value%identityAlignment
A0A0A0K9U1 Uncharacterized protein2.1e-2776.52Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGG--GLGGGLGGLGGTTA--
        MAK+F+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIG+NGLPFGGLGGA+GG   GG+GGG+GG  G G+GG  G+GGGLGGLGG     
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGG--GLGGGLGGLGGTTA--

Query:  ---GGLGGGLGGGLGGGLGGGLGGGAGGGSGL
           GG  GGLGGGLGGGLGGGLGGG GG SG+
Subjt:  ---GGLGGGLGGGLGGGLGGGLGGGAGGGSGL

A0A1S3CGR1 acanthoscurrin-1-like1.9e-2881.6Show/hide
Query:  IALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLG
        +ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+GG G  GG+GGG+GG TG G G    GG GGGLGG+GGTT GGLG
Subjt:  IALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTTAGGLG

Query:  GGLGGGLGGGLGGGLGGGAGGGSGL
        GGLGGGLGGGLGGGLGGG GG SG+
Subjt:  GGLGGGLGGGLGGGLGGGAGGGSGL

A0A5A7U5T7 Acanthoscurrin-1-like1.2e-3081.54Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTT
        MAK+F+ALLLALVATHA+ARPTPKDDTF+DQKNFLTYGGVGGYSGIGSNGLPFGG+GGA+GG G  GG+GGG+GG TG G G    GG GGGLGG+GGTT
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTG-PGGIGGGIGGFTGTGMG----GGLGGGLGGLGGTT

Query:  AGGLGGGLGGGLGGGLGGGLGGGAGGGSGL
         GGLGGGLGGGLGGGLGGGLGGG GG SG+
Subjt:  AGGLGGGLGGGLGGGLGGGLGGGAGGGSGL

A0A6J1H8T3 acanthoscurrin-1-like9.1e-3182.71Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGG--GLGGGL--GGLGGTTA
        MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGG  G G GG  GLGGGL  GGLGGT  
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGG--GLGGGL--GGLGGTTA

Query:  GG-LGGGLGGGLGGGLGGGLGG--GAGGGSGLP
        GG LGGGLGG +GGGLGGGLGG  G GGGSGLP
Subjt:  GG-LGGGLGGGLGGGLGGGLGG--GAGGGSGLP

A0A6J1KVV3 acanthoscurrin-1-like3.5e-3078.26Show/hide
Query:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGF-----TGTGMGGGLGGGL------G
        MAK+F+A+LLAL+ATHA+ARPTPKD TFTDQKNFLTYGG+GGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGG       G G+GGGLGGGL      G
Subjt:  MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGF-----TGTGMGGGLGGGL------G

Query:  GLGGTTAGG-LGGGLGGGLGGGLGGGLGGGAGGGSGLP
        GLGGT  GG LGGGLGG +GGGLGGG+GG  GGGSGLP
Subjt:  GLGGTTAGG-LGGGLGGGLGGGLGGGLGGGAGGGSGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29030.1 Putative membrane lipoprotein1.1e-0453.49Show/hide
Query:  MAKVFIALLLALVATHAV---ARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGGGLGGGLGGLGGTTAG
        MAK F  + L      A+   AR  P     +DQKN+L YG  GGYSG+G NGLPFGG+GG V  +GPGG   G GGF G   GGGLGGGLGG  G+   
Subjt:  MAKVFIALLLALVATHAV---ARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGGGLGGGLGGLGGTTAG

Query:  GLGGGLGGGLGGGLGGGLGGGAGGGSGLP
        GLGGGLGG  G G+G G  GG+ GG   P
Subjt:  GLGGGLGGGLGGGLGGGLGGGAGGGSGLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAGTGTTCATAGCTTTGCTCTTGGCTCTTGTAGCCACTCATGCCGTGGCTCGACCTACGCCGAAGGACGACACCTTCACTGACCAAAAGAACTTCCTAACCTA
TGGTGGCGTCGGTGGCTACTCCGGCATCGGCAGCAACGGTCTCCCATTCGGTGGGCTCGGGGGTGCTGTTGGAGGAACTGGCCCTGGAGGCATTGGTGGAGGAATTGGTG
GATTCACAGGCACCGGCATGGGAGGAGGCTTGGGAGGCGGCTTGGGAGGCCTCGGTGGAACCACGGCTGGCGGTCTCGGTGGCGGTCTAGGTGGCGGTCTAGGTGGCGGT
CTCGGTGGCGGTCTCGGTGGCGGAGCTGGCGGTGGTTCTGGACTTCCTTAG
mRNA sequenceShow/hide mRNA sequence
GCCCTTTAAAACCCTAAGCTCACACCTCCATTGGCCAACAACACACACAAAGACAAGTGTTAAGTGTTAGTAGTAAGCAAGAAGAAAATGGCCAAAGTGTTCATAGCTTT
GCTCTTGGCTCTTGTAGCCACTCATGCCGTGGCTCGACCTACGCCGAAGGACGACACCTTCACTGACCAAAAGAACTTCCTAACCTATGGTGGCGTCGGTGGCTACTCCG
GCATCGGCAGCAACGGTCTCCCATTCGGTGGGCTCGGGGGTGCTGTTGGAGGAACTGGCCCTGGAGGCATTGGTGGAGGAATTGGTGGATTCACAGGCACCGGCATGGGA
GGAGGCTTGGGAGGCGGCTTGGGAGGCCTCGGTGGAACCACGGCTGGCGGTCTCGGTGGCGGTCTAGGTGGCGGTCTAGGTGGCGGTCTCGGTGGCGGTCTCGGTGGCGG
AGCTGGCGGTGGTTCTGGACTTCCTTAGAGAAGTTACTTAGTTATTTTTTATTTATGTATTCAAAAGTTATTGCAGTTTGAAGTTTATTATTTAAATTCGTGTCAAGAGA
TGTAGTGGTTAAGTTGTTGTCTAGTCAGCTTATAACATTTGGTTGTGTTTGGTTTTCTATTAAAATTTAGATATGATTATGTTTGTTTGTTCATTTTCTGAGTGAAATAC
AAACGTCTTTCTTTAGTGGTTT
Protein sequenceShow/hide protein sequence
MAKVFIALLLALVATHAVARPTPKDDTFTDQKNFLTYGGVGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGFTGTGMGGGLGGGLGGLGGTTAGGLGGGLGGGLGGG
LGGGLGGGAGGGSGLP