| GenBank top hits | e value | %identity | Alignment |
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| KAG6592199.1 hypothetical protein SDJN03_14545, partial [Cucurbita argyrosperma subsp. sororia] | 5.8e-75 | 91.41 | Show/hide |
Query: RVVSAFRVCSESLTMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR
R+VSA R C SL MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR
Subjt: RVVSAFRVCSESLTMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR
Query: ADRKPPGVGRGRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
DRKPPGVGRGRGRGR+DGPGGRP+KGMGRGFDDGAKAASGGRG+G GGK G NRVGGRGRG
Subjt: ADRKPPGVGRGRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.1e-73 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRPAKGMGRGFDDGAKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 1.7e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRPAKGMGRGFDDGAKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| XP_022975088.1 sm-like protein LSM4 isoform X1 [Cucurbita maxima] | 4.2e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRP+KGMGRGFDDGAKAASGGRG+GG GGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 2.1e-77 | 94.44 | Show/hide |
Query: VVSAFRVCSESLTMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
VVSA VC SL MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
Subjt: VVSAFRVCSESLTMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
Query: DRKPPGVGRGRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
DRKPPGVGRGRGRGR+DGPGGRPAKGMGRGFDD AKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: DRKPPGVGRGRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 4.4e-76 | 93.83 | Show/hide |
Query: VVSAFRVCSESLTMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
VVSA VC SL MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
Subjt: VVSAFRVCSESLTMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRA
Query: DRKPPGVGRGRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
DRKP GVGRGRGRGR+DGPG RPAKGMGRGFDDGAKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: DRKPPGVGRGRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 5.3e-74 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRPAKGMGRGFDDGAKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 8.2e-75 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRPAKGMGRGFDDGAKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1ID83 U6 snRNA-associated Sm-like protein LSm4 | 2.0e-73 | 95.97 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSR DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRP+KGMGRGFDDGAKAASGGRG+GG GGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 8.2e-75 | 97.32 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR+DGPGGRPAKGMGRGFDDGAKAASGGRG+GGPGGKPG NRVGGRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 5.9e-54 | 79.19 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
G DDG GA+ GRGRG GK G NR GRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 6.1e-59 | 82.67 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: -GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GRDD GR KG+GRG DDG + GRG+GGP K G R GGRGRG
Subjt: -GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.8e-58 | 84.21 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
Query: RGRDDG--PGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
RG D G PGGR G+GRG DDG GGRGRGG GGK G + GGRGRG
Subjt: RGRDDG--PGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 4.1e-39 | 63.58 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE +GRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGG-PG-GKPGPNRVGGRGRG
G GP + K GRG + GGRGRGG PG G+ P + GR G
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGG-PG-GKPGPNRVGGRGRG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.3e-56 | 81.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRG-FDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
GR++G G R +G GR AKA RGRG GK G GGRGRG
Subjt: GRDDGPGGRPAKGMGRG-FDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 6.3e-11 | 34.06 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ GVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
Query: GRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGP
GRG R G+PA G GRG +GGRG P
Subjt: GRGRGRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGP
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| AT1G76300.1 snRNP core protein SMD3 | 3.5e-09 | 32.09 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + GVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGP
AKG GRG GGRG P
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 8.6e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGRDDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGRDDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.8e-05 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
Query: GRGRDDGPGGR
GRGR G GGR
Subjt: GRGRDDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 4.2e-55 | 79.19 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
G DDG GA+ GRGRG GK G NR GRGRG
Subjt: GRDDGPGGRPAKGMGRGFDDGAKAASGGRGRGGPGGKPGPNRVGGRGRG
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