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Sed0020543 (gene) of Chayote v1 genome

Gene IDSed0020543
OrganismSechium edule (Chayote v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like
Genome locationLG04:47743358..47746453
RNA-Seq ExpressionSed0020543
SyntenySed0020543
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021636306.1 uncharacterized protein LOC110632398 [Hevea brasiliensis]2.2e-0650Show/hide
Query:  GANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINST
        G NH VKL++ TC C K+Q++ IPCSH IAAC+ L I+Y   + +YY +  T
Subjt:  GANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINST

XP_021688238.1 uncharacterized protein LOC110670480 [Hevea brasiliensis]3.8e-0648.08Show/hide
Query:  GANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINST
        G NH VKL++ TC C K+Q++ IPCSH IAAC+ + I+Y   + +YY +  T
Subjt:  GANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINST

XP_030957733.1 uncharacterized protein LOC115979817 [Quercus lobata]1.7e-0642.86Show/hide
Query:  VEDFESLHGVDVVPSFYTTLNMDGGANHRVKLH--KNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS
        V +F +  GV  V + Y   +  GG NH  ++H  + TCGC KWQ L+IPCSHAI   K LH+D  + I   Y +N+
Subjt:  VEDFESLHGVDVVPSFYTTLNMDGGANHRVKLH--KNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS

XP_030964083.1 uncharacterized protein LOC115985259 [Quercus lobata]1.0e-0640.51Show/hide
Query:  VEDFESLHGVDVVPSFYTTLNMDGG-ANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINSTFL
        V +F    GV  V + Y      GG  NH V++   TCGC KWQ L+IPCSHAI   + LH++  + I   Y +N+  L
Subjt:  VEDFESLHGVDVVPSFYTTLNMDGG-ANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINSTFL

XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]3.9e-1129.32Show/hide
Query:  MDVIGFIVYMNGNIVNGPNGIEYDVPPCTQINASRDMDFHSFVSGLCQVLSLERSEEIEIVFKYVT--------IGIPLQNVNEFNFMKTIATSEAR--H
        MDV+ F+ YM+GNIVNGP+GIEYD  P  +IN  R  DF++ + G     S+ R + +E++F+Y +        I I L++  +  FM + A        
Subjt:  MDVIGFIVYMNGNIVNGPNGIEYDVPPCTQINASRDMDFHSFVSGLCQVLSLERSEEIEIVFKYVT--------IGIPLQNVNEFNFMKTIATSEAR--H

Query:  LYITRPHIQSTSQVEQYMEEEQIEEDQTEEVNEENATYPETNTTNVDDPMCTNELESPPTDDDDEIPPVEDFESLHGVDVVPSFYTTLNMD
        LYI++P + S +   + +E  ++E    E+              + D  + TN+ E    DDD ++  +      +GV  VP  +T ++++
Subjt:  LYITRPHIQSTSQVEQYMEEEQIEEDQTEEVNEENATYPETNTTNVDDPMCTNELESPPTDDDDEIPPVEDFESLHGVDVVPSFYTTLNMD

TrEMBL top hitse value%identityAlignment
A0A438FPA0 Serine/threonine-protein phosphatase 7 long form-like7.0e-0638.36Show/hide
Query:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS
        F  +H    V +     +MD G N + VKL++ TC CNKWQ   IPCSH +A    + ID   L++ YY++++
Subjt:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS

A0A438IQG1 Serine/threonine-protein phosphatase 7 long form-like7.0e-0638.36Show/hide
Query:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS
        F  +H    V +     +MD G N + VKL++ TC CNKWQ   IPCSH +A    + ID   L++ YY++++
Subjt:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS

A0A438K0P0 Serine/threonine-protein phosphatase 7 long form-like7.0e-0638.36Show/hide
Query:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS
        F  +H    V +     +MD G N + VKL++ TC CNKWQ   IPCSH +A    + ID   L++ YY++++
Subjt:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS

A5BJW1 SWIM-type domain-containing protein7.0e-0638.36Show/hide
Query:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS
        F  +H    V +     +MD G N + VKL++ TC CNKWQ   IPCSH +A    + ID   L++ YY++++
Subjt:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS

A5BXI2 SWIM-type domain-containing protein5.4e-0638.36Show/hide
Query:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS
        F  +H    V +     +MD G N + VKL++ TC CNKWQ   IPCSH +A    + ID   L++ YY++++
Subjt:  FESLHGVDVVPSFYTTLNMDGGANHR-VKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKINS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase2.9e-0430.77Show/hide
Query:  ELESPPTDDDDEIPPVEDFE-SLHGVDVVPSFYTTL--NMDGGANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKI
        +LE   TD D  +  +   E   + V + P   T L    +   +  V+L+  TC C ++Q+ + PC HA+A C EL I+ L  + D Y +
Subjt:  ELESPPTDDDDEIPPVEDFE-SLHGVDVVPSFYTTL--NMDGGANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHIDYLTLIQDYYKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTATTGGATTTATTGTGTACATGAATGGAAACATTGTCAATGGACCAAACGGTATCGAGTACGATGTTCCACCTTGTACACAAATTAATGCTTCTAGGGACAT
GGACTTCCACTCATTCGTCAGTGGATTATGTCAAGTGCTTTCATTAGAAAGAAGTGAAGAAATTGAGATTGTTTTTAAGTACGTGACTATTGGGATACCTTTACAAAATG
TTAATGAATTCAATTTCATGAAAACCATTGCTACTTCAGAAGCAAGACACTTGTATATTACTCGACCACACATTCAGAGTACATCACAAGTTGAACAATATATGGAGGAA
GAACAAATAGAGGAAGACCAAACAGAGGAAGTTAACGAGGAAAATGCCACTTATCCAGAGACAAATACAACCAATGTTGACGACCCGATGTGTACAAATGAATTAGAGAG
TCCTCCCACAGACGATGATGACGAGATTCCTCCCGTTGAGGACTTTGAGTCACTCCATGGTGTAGATGTAGTTCCTTCATTTTACACTACGTTGAATATGGATGGTGGGG
CAAATCATCGTGTCAAGCTACACAAGAATACGTGTGGTTGCAACAAGTGGCAACAACTTGAGATTCCTTGCTCTCATGCAATTGCTGCATGTAAAGAGTTGCACATAGAT
TATTTGACTCTTATACAAGACTATTACAAAATCAACAGTACATTCTTGATTCTACTCTTATATTATATTTACAATATAATTTCTAAAATAATTGATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTATTGGATTTATTGTGTACATGAATGGAAACATTGTCAATGGACCAAACGGTATCGAGTACGATGTTCCACCTTGTACACAAATTAATGCTTCTAGGGACAT
GGACTTCCACTCATTCGTCAGTGGATTATGTCAAGTGCTTTCATTAGAAAGAAGTGAAGAAATTGAGATTGTTTTTAAGTACGTGACTATTGGGATACCTTTACAAAATG
TTAATGAATTCAATTTCATGAAAACCATTGCTACTTCAGAAGCAAGACACTTGTATATTACTCGACCACACATTCAGAGTACATCACAAGTTGAACAATATATGGAGGAA
GAACAAATAGAGGAAGACCAAACAGAGGAAGTTAACGAGGAAAATGCCACTTATCCAGAGACAAATACAACCAATGTTGACGACCCGATGTGTACAAATGAATTAGAGAG
TCCTCCCACAGACGATGATGACGAGATTCCTCCCGTTGAGGACTTTGAGTCACTCCATGGTGTAGATGTAGTTCCTTCATTTTACACTACGTTGAATATGGATGGTGGGG
CAAATCATCGTGTCAAGCTACACAAGAATACGTGTGGTTGCAACAAGTGGCAACAACTTGAGATTCCTTGCTCTCATGCAATTGCTGCATGTAAAGAGTTGCACATAGAT
TATTTGACTCTTATACAAGACTATTACAAAATCAACAGTACATTCTTGATTCTACTCTTATATTATATTTACAATATAATTTCTAAAATAATTGATTTATAG
Protein sequenceShow/hide protein sequence
MDVIGFIVYMNGNIVNGPNGIEYDVPPCTQINASRDMDFHSFVSGLCQVLSLERSEEIEIVFKYVTIGIPLQNVNEFNFMKTIATSEARHLYITRPHIQSTSQVEQYMEE
EQIEEDQTEEVNEENATYPETNTTNVDDPMCTNELESPPTDDDDEIPPVEDFESLHGVDVVPSFYTTLNMDGGANHRVKLHKNTCGCNKWQQLEIPCSHAIAACKELHID
YLTLIQDYYKINSTFLILLLYYIYNIISKIIDL