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Sed0020555 (gene) of Chayote v1 genome

Gene IDSed0020555
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:21048204..21048446
RNA-Seq ExpressionSed0020555
SyntenySed0020555
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]1.3e-0841.51Show/hide
Query:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH
        I +IS  A +L+ +S  N ISH + RLLP E+P +                             D   AT D ++ GGDFRPTT GHSPGAGHS AP  H
Subjt:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH

Query:  FHSKIH
          SKIH
Subjt:  FHSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]5.8e-0944.44Show/hide
Query:  SVVAVLLVFASISNYISHIEGRLLPSEHPGVD------------LPVAT--------------SDAQIQGGDFRPTTPGHSPGAGHSFAPDRHFHSKIH
        S+    L+ +SI N ISH  GRLLP EHP V              P+ +               DA++ GGDFRPTTPGHSPG GHS AP  H  SKIH
Subjt:  SVVAVLLVFASISNYISHIEGRLLPSEHPGVD------------LPVAT--------------SDAQIQGGDFRPTTPGHSPGAGHSFAPDRHFHSKIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1458.33Show/hide
Query:  MAGINVIS--VVAVLLVFASI-SNYISHIEG-RLLP--SEHPGVDL----------PVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRHFHSKIH
        MAGIN+IS    AVLLV ASI +N I H +G RLLP   EHP V L          P+A +D  + GGDFRPTTPGHSPGAGH  APD H  SKIH
Subjt:  MAGINVIS--VVAVLLVFASI-SNYISHIEG-RLLP--SEHPGVDL----------PVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRHFHSKIH

KGN55172.1 hypothetical protein Csa_012400 [Cucumis sativus]1.1e-0738.68Show/hide
Query:  INVISVVAVLLVFASISNYISHIEGRLLPSE-----------HPGVDLPVA------------------TSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH
        I +IS    +L+ +S + ++SH + R+ P++           HP ++  VA                  TS+A++ GGDFRPTTPGHSPGAGHS AP  H
Subjt:  INVISVVAVLLVFASISNYISHIEGRLLPSE-----------HPGVDLPVA------------------TSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH

Query:  FHSKIH
          SKIH
Subjt:  FHSKIH

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]1.2e-0942.45Show/hide
Query:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH
        I +IS  A +L+ +S  N ISH + RLLP E+P +                             D   AT D ++ GGDFRPTTPGHSPGAGHS AP  H
Subjt:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH

Query:  FHSKIH
          SKIH
Subjt:  FHSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein5.3e-0838.68Show/hide
Query:  INVISVVAVLLVFASISNYISHIEGRLLPSE-----------HPGVDLPVA------------------TSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH
        I +IS    +L+ +S + ++SH + R+ P++           HP ++  VA                  TS+A++ GGDFRPTTPGHSPGAGHS AP  H
Subjt:  INVISVVAVLLVFASISNYISHIEGRLLPSE-----------HPGVDLPVA------------------TSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH

Query:  FHSKIH
          SKIH
Subjt:  FHSKIH

A0A5A7VEP2 Uncharacterized protein6.2e-0941.51Show/hide
Query:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH
        I +IS  A +L+ +S  N ISH + RLLP E+P +                             D   AT D ++ GGDFRPTT GHSPGAGHS AP  H
Subjt:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH

Query:  FHSKIH
          SKIH
Subjt:  FHSKIH

A0A5D3D9H8 Uncharacterized protein5.7e-1042.45Show/hide
Query:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH
        I +IS  A +L+ +S  N ISH + RLLP E+P +                             D   AT D ++ GGDFRPTTPGHSPGAGHS AP  H
Subjt:  INVISVVAVLLVFASISNYISHIEGRLLPSEHPGV-----------------------------DLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRH

Query:  FHSKIH
          SKIH
Subjt:  FHSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATCAATGTCATCTCTGTTGTCGCCGTCCTCCTCGTTTTCGCTTCTATCTCTAACTATATATCGCACATCGAAGGTAGGTTGTTGCCGAGCGAACATCCCGG
TGTCGATCTCCCTGTTGCTACTAGCGATGCGCAAATACAAGGAGGCGACTTCCGTCCGACTACTCCGGGCCACAGCCCTGGCGCTGGCCACTCGTTTGCGCCGGACAGGC
ACTTCCATTCGAAAATCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATCAATGTCATCTCTGTTGTCGCCGTCCTCCTCGTTTTCGCTTCTATCTCTAACTATATATCGCACATCGAAGGTAGGTTGTTGCCGAGCGAACATCCCGG
TGTCGATCTCCCTGTTGCTACTAGCGATGCGCAAATACAAGGAGGCGACTTCCGTCCGACTACTCCGGGCCACAGCCCTGGCGCTGGCCACTCGTTTGCGCCGGACAGGC
ACTTCCATTCGAAAATCCATTAA
Protein sequenceShow/hide protein sequence
MAGINVISVVAVLLVFASISNYISHIEGRLLPSEHPGVDLPVATSDAQIQGGDFRPTTPGHSPGAGHSFAPDRHFHSKIH