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Sed0020563 (gene) of Chayote v1 genome

Gene IDSed0020563
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:30007630..30008180
RNA-Seq ExpressionSed0020563
SyntenySed0020563
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031696.1 uncharacterized protein E6C27_scaffold139G004800 [Cucumis melo var. makuwa]4.1e-1362Show/hide
Query:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK
        MKPLISKSLL PIL+TF LLI S HLHTP QAAR L            LPLS SS           HLP AARKL ET+SST +SLR IPRSGPNPTQN+
Subjt:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK

KAG7016372.1 hypothetical protein SDJN02_21480, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1563.54Show/hide
Query:  MKPLISKSLLPILYTFLLISSLHLHTPAQAARSLLPL-----SSSSRIH-------LPLAARKLPETASSTISSLRGIPRSGPNPTQNKMKPEVRT
        MKPLI KSL+PIL +FLL+S   L TP QAAR LLP+     +SSS ++       LPL ARKL ETASST SSLR IPRSGPNPTQN+MKPE+R+
Subjt:  MKPLISKSLLPILYTFLLISSLHLHTPAQAARSLLPL-----SSSSRIH-------LPLAARKLPETASSTISSLRGIPRSGPNPTQNKMKPEVRT

KAG7032911.1 hypothetical protein SDJN02_06961 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2176.83Show/hide
Query:  MKPLISKSLLPILYTFLLISSLHLHTPAQAARSLLPLSSS--SRIHLPLAARKLPETASSTISSLRGIPRSGPNPTQNKMKP
        MKPLI KSLLPILYTFLL+  LHLHT A AAR+LLP SSS    +HLPL  RKLPETASST SSLR IP+SGPNPTQNK+KP
Subjt:  MKPLISKSLLPILYTFLLISSLHLHTPAQAARSLLPLSSS--SRIHLPLAARKLPETASSTISSLRGIPRSGPNPTQNKMKP

TYK04416.1 uncharacterized protein E5676_scaffold409G00120 [Cucumis melo var. makuwa]6.7e-1661.68Show/hide
Query:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK
        MKPLISKSLL PIL+TF LLI S HLHTP QAAR L            LPLS SS           HLP AARKL ET+SST +SLR IPRSGPNPTQN+
Subjt:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK

Query:  MKPEVRT
        MKP++R+
Subjt:  MKPEVRT

XP_011656590.1 uncharacterized protein LOC105435754 [Cucumis sativus]3.6e-1762.96Show/hide
Query:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSLLP----------------LSSSSRI------HLPLAARKLPETASSTISSLRGIPRSGPNPTQN
        MKPLISKSLL PILYTF LLI S HLHTP QAAR LLP                LSSSS        HLP AARKL ET+SST +SLR IPRSGPNPTQN
Subjt:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSLLP----------------LSSSSRI------HLPLAARKLPETASSTISSLRGIPRSGPNPTQN

Query:  KMKPEVRT
        +MKP++R+
Subjt:  KMKPEVRT

TrEMBL top hitse value%identityAlignment
A0A5A7SNV6 Uncharacterized protein2.0e-1362Show/hide
Query:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK
        MKPLISKSLL PIL+TF LLI S HLHTP QAAR L            LPLS SS           HLP AARKL ET+SST +SLR IPRSGPNPTQN+
Subjt:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK

A0A5D3C1X0 Uncharacterized protein3.2e-1661.68Show/hide
Query:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK
        MKPLISKSLL PIL+TF LLI S HLHTP QAAR L            LPLS SS           HLP AARKL ET+SST +SLR IPRSGPNPTQN+
Subjt:  MKPLISKSLL-PILYTF-LLISSLHLHTPAQAARSL------------LPLSSSSR---------IHLPLAARKLPETASSTISSLRGIPRSGPNPTQNK

Query:  MKPEVRT
        MKP++R+
Subjt:  MKPEVRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTTTGATCTCCAAATCATTGCTTCCAATTCTCTACACTTTTTTACTGATCTCTTCTCTCCATCTTCACACTCCAGCTCAAGCTGCAAGATCTCTCCTCCCGTT
ATCATCGTCATCGCGAATCCATCTTCCTCTCGCAGCTCGGAAGCTCCCCGAAACGGCATCGTCTACTATCTCGAGCCTTCGCGGAATACCTCGAAGCGGGCCGAATCCAA
CACAGAACAAAATGAAGCCAGAGGTTAGAACCTAA
mRNA sequenceShow/hide mRNA sequence
CAAGACATTGATTCTCTCAGAGCTTCACAAAAAAACATGAAACCTTTGATCTCCAAATCATTGCTTCCAATTCTCTACACTTTTTTACTGATCTCTTCTCTCCATCTTCA
CACTCCAGCTCAAGCTGCAAGATCTCTCCTCCCGTTATCATCGTCATCGCGAATCCATCTTCCTCTCGCAGCTCGGAAGCTCCCCGAAACGGCATCGTCTACTATCTCGA
GCCTTCGCGGAATACCTCGAAGCGGGCCGAATCCAACACAGAACAAAATGAAGCCAGAGGTTAGAACCTAAATCTCAAAGGACTCATCAAGATGAAGAAAAAGAAGATGT
TCAAAAGAATCTCAAAGCCATCCATTTTAGTTTTCTTTTTTATACTGATTTTTTATTTTTTTTATAGCACTAGAAATACAGTACTGACTGTTACATACATGATCTGATTA
GAAAATGG
Protein sequenceShow/hide protein sequence
MKPLISKSLLPILYTFLLISSLHLHTPAQAARSLLPLSSSSRIHLPLAARKLPETASSTISSLRGIPRSGPNPTQNKMKPEVRT