; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020565 (gene) of Chayote v1 genome

Gene IDSed0020565
OrganismSechium edule (Chayote v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationLG06:6938500..6942931
RNA-Seq ExpressionSed0020565
SyntenySed0020565
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]9.9e-3629.46Show/hide
Query:  VENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIF
        ++N +V +     G W+   + +  + +D   + S+P    +  D+  WHF K G ++V+S +KV +D    +  SS+  +   W  +WK  +P+K KIF
Subjt:  VENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIF

Query:  VWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRA-----KLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNK
         W+   G++PT   L +R ++   +C +CN + E+I+H  + C  A     +LL  +V  + + +   P I+  L R +    F    +  W +W +RN 
Subjt:  VWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRA-----KLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNK

Query:  MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT
        +  G         VTWI    ++ AN  R  + + H +  S  P+       WK P     K++ DAS  L   K G G IIRD+ G      SS  L  
Subjt:  MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT

Query:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLV
          V   EA A LEG+ LA +IG+  + IESD+  ++
Subjt:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLV

XP_012851712.1 PREDICTED: uncharacterized protein LOC105971405 [Erythranthe guttata]5.8e-3628.42Show/hide
Query:  VEAGVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAH-------KVFMDRNLNVCRSSVNSIQSIWDLIW
        + +G  N +      + G WD+  L  V    DV  + ++P+    A D W+WHFSK GNF+V+S +          + R  N   S     Q  W  IW
Subjt:  VEAGVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAH-------KVFMDRNLNVCRSSVNSIQSIWDLIW

Query:  KLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPII---VDELKRCLSEEEFEAATVTL
        +L +P KI++F+WRL    IPTN  L +R I++ P C  C+   ET  H    C+  + +  +  +  +       I     +LK+ L EE F  A V  
Subjt:  KLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPII---VDELKRCLSEEEFEAATVTL

Query:  WSIWNDRNK-MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRR
        W  W++RN+ M   + +  C+  V+W   +L +  +    P+        SR+ +   S  +WK PP N +KL+ DA+ P        G + RD  G   
Subjt:  WSIWNDRNK-MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRR

Query:  GVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLLECCEMLKKF
        G   +     +  +  EA A L+ + +A+ +G+ NI +E D   ++ A+  ++ + S  G F+ EC  + + F
Subjt:  GVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLLECCEMLKKF

XP_012857846.1 PREDICTED: uncharacterized protein LOC105977118 [Erythranthe guttata]1.7e-3528.15Show/hide
Query:  VEAGVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAH-------KVFMDRNLNVCRSSVNSIQSIWDLIW
        + +G  N +      + G WD+  L  V    DV  + ++P+    A D W+WHFSK GNF+V+S +          + R  N   S     Q  W  IW
Subjt:  VEAGVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAH-------KVFMDRNLNVCRSSVNSIQSIWDLIW

Query:  KLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPII---VDELKRCLSEEEFEAATVTL
        +L +P KI++F+WRL    IPTN  L +R I++ P C  C+   ET  H    C+  + +  +  +  +       I     +LK+ L EE F  A V  
Subjt:  KLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPII---VDELKRCLSEEEFEAATVTL

Query:  WSIWNDRNK-MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRR
        W  W++RN+ M   + +  C+  V+W   +L +  +    P+        SR+ +   S  +WK PP N +KL+ D + P        G + RD  G   
Subjt:  WSIWNDRNK-MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRR

Query:  GVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLLECCEMLKKF
        G   +     +  +  EA A L+ + +A+ +G+ NI +E D   ++ A+  ++ + S  G F+ EC  + + F
Subjt:  GVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLLECCEMLKKF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.6e-4132.05Show/hide
Query:  GVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKI
        G  +  V  +IT +G WDV  ++H    ED   + S+P+S  +  D+W+WH+ K GN+SV+S +K++M    N   +S N   + W+ IWKL VP+KIKI
Subjt:  GVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKI

Query:  FVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK-LLNINVDYKAMAMLQGPIIVDELKRCLSEE----EFEAATVTLWSIWNDRN
        F+WR     IPT   L  R I   P C +C    E+I H FF CKRA+ +      +      +  I   EL   L+E+    +   A +T W IWNDRN
Subjt:  FVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK-LLNINVDYKAMAMLQGPIIVDELKRCLSEE----EFEAATVTLWSIWNDRN

Query:  KMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQ
         +  G  V   E +  W+  +L+S      S  ++ +   +++  N+      W+      LKL+ DA+    G     G IIRD        ++S R+ 
Subjt:  KMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQ

Query:  -TMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQL------QNSVSGFFLLECC
          +  L AE   +LEGL+ A      ++E+ESDS +L + + + ++      QN V     L CC
Subjt:  -TMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQL------QNSVSGFFLLECC

XP_030509188.1 uncharacterized protein LOC115723863 [Cannabis sativa]1.5e-3630.9Show/hide
Query:  NDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVW
        N LV D IT++  WD+I L     + DV  + SIPLS     D  +W  S  G ++VKS +++ +        +S +S+++ W   WK+K+P K++IFVW
Subjt:  NDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVW

Query:  RLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK----LLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNV
        ++    +P    L +RHI T P C +CN   E+I+H  F C RAK    L ++++D+  +       I+  L   LS  EFE   V  W  W++RN +  
Subjt:  RLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK----LLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNV

Query:  GDTVPDCESRVTWIWSYLESLAN--VGRSPDRVLHVDSKSRIPNNGDSKC-IWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT
        G+TV   ++  ++  SYL    N    RS    + + +    P++  +    W APP   LKL+ DA++     KVG GA +R+  G      S   L  
Subjt:  GDTVPDCESRVTWIWSYLESLAN--VGRSPDRVLHVDSKSRIPNNGDSKC-IWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT

Query:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQ
              EA  L   L       +    IE+DS ++V  +   Q
Subjt:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQ

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein4.8e-3629.46Show/hide
Query:  VENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIF
        ++N +V +     G W+   + +  + +D   + S+P    +  D+  WHF K G ++V+S +KV +D    +  SS+  +   W  +WK  +P+K KIF
Subjt:  VENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIF

Query:  VWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRA-----KLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNK
         W+   G++PT   L +R ++   +C +CN + E+I+H  + C  A     +LL  +V  + + +   P I+  L R +    F    +  W +W +RN 
Subjt:  VWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRA-----KLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNK

Query:  MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT
        +  G         VTWI    ++ AN  R  + + H +  S  P+       WK P     K++ DAS  L   K G G IIRD+ G      SS  L  
Subjt:  MNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT

Query:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLV
          V   EA A LEG+ LA +IG+  + IESD+  ++
Subjt:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLV

A0A6J1DX30 uncharacterized protein LOC1110248742.2e-4132.05Show/hide
Query:  GVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKI
        G  +  V  +IT +G WDV  ++H    ED   + S+P+S  +  D+W+WH+ K GN+SV+S +K++M    N   +S N   + W+ IWKL VP+KIKI
Subjt:  GVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKI

Query:  FVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK-LLNINVDYKAMAMLQGPIIVDELKRCLSEE----EFEAATVTLWSIWNDRN
        F+WR     IPT   L  R I   P C +C    E+I H FF CKRA+ +      +      +  I   EL   L+E+    +   A +T W IWNDRN
Subjt:  FVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK-LLNINVDYKAMAMLQGPIIVDELKRCLSEE----EFEAATVTLWSIWNDRN

Query:  KMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQ
         +  G  V   E +  W+  +L+S      S  ++ +   +++  N+      W+      LKL+ DA+    G     G IIRD        ++S R+ 
Subjt:  KMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQ

Query:  -TMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQL------QNSVSGFFLLECC
          +  L AE   +LEGL+ A      ++E+ESDS +L + + + ++      QN V     L CC
Subjt:  -TMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQL------QNSVSGFFLLECC

A0A803PVI9 Uncharacterized protein6.2e-3631.18Show/hide
Query:  NDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVW
        N  V  +IT +  W++  L    +  DV  V  IPLS   A+D  +W+F  +G ++VKS + +       +  +S    Q+ W+  W L +PSK++IF+W
Subjt:  NDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVW

Query:  RLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPIIVDELKRCLSE----EEFEAATVTLWSIWNDRNKMNV
        R +   +PT   L  RHI   P C+LC    ET  H  F CKR + +  +  +    M+   + + EL   +S+     + E     LW IWN+RNK   
Subjt:  RLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPIIVDELKRCLSE----EEFEAATVTLWSIWNDRNKMNV

Query:  GDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLG-----LRRGVSSSFRL
        G              SYLE      R         S + +    D+   W  PP   LKL+ DA++       GCGAI+RD  G       + V  SFR 
Subjt:  GDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLG-----LRRGVSSSFRL

Query:  QTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLL
        + M     EA AL+  L+   + G+    IE+DS  LVVA   + L  +VS F  L
Subjt:  QTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLL

A0A803Q185 Uncharacterized protein7.4e-3728.99Show/hide
Query:  VKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVWRLV
        V D    +G WD   ++ V  ++D   + ++P S     D  +WH+ K+G +SVKS +++  +      +S  +     W  +W+LK+P KIK+FVW+L 
Subjt:  VKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVWRLV

Query:  QGFIPTNFVLKQRHINTQPWCVLCN-KNVETISHTFFGCKRA----KLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNVGD
         G++PT+ VL +RH++T   C  C+  N ETI H  + CK++    KL +  ++ K          +  L   +S+++FE   V  WS+WN RN      
Subjt:  QGFIPTNFVLKQRHINTQPWCVLCN-KNVETISHTFFGCKRA----KLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNVGD

Query:  TVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLS
         VP     V W +  LE        P  V+  +           + +WK P    +K++VDASV       G G +IR   G     SS+   +    L 
Subjt:  TVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLS

Query:  AEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQ
         E  A+L+G+++  +  I +  IE D    +  I KK+
Subjt:  AEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQ

A0A803Q2K8 Uncharacterized protein7.4e-3730.9Show/hide
Query:  NDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVW
        N LV D IT++  WD+I L     + DV  + SIPLS     D  +W  S  G ++VKS +++ +        +S +S+++ W   WK+K+P K++IFVW
Subjt:  NDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVW

Query:  RLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK----LLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNV
        ++    +P    L +RHI T P C +CN   E+I+H  F C RAK    L ++++D+  +       I+  L   LS  EFE   V  W  W++RN +  
Subjt:  RLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK----LLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNV

Query:  GDTVPDCESRVTWIWSYLESLAN--VGRSPDRVLHVDSKSRIPNNGDSKC-IWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT
        G+TV   ++  ++  SYL    N    RS    + + +    P++  +    W APP   LKL+ DA++     KVG GA +R+  G      S   L  
Subjt:  GDTVPDCESRVTWIWSYLESLAN--VGRSPDRVLHVDSKSRIPNNGDSKC-IWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQT

Query:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQ
              EA  L   L       +    IE+DS ++V  +   Q
Subjt:  MDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQ

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.4e-1625.53Show/hide
Query:  TSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTF
        T A D   W FS+DG FSV+SA+++     L V      ++ S ++ +WK++VP ++K F+W +    + T     +RH++    C +C   VE++ H  
Subjt:  TSATDNWMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTF

Query:  FGCKRAKLLNINVDYKAMAMLQG-------PIIVDELKRCLSEEEFEAAT---VTLWSIWNDRNKMNVGDTVPDCESRVTWI--WSYLESLANVGRSPDR
          C     L I V        QG         + D L      E+   +T   V +W  W  R     G+    C  RV ++  W+     A+ G     
Subjt:  FGCKRAKLLNINVDYKAMAMLQG-------PIIVDELKRCLSEEEFEAAT---VTLWSIWNDRNKMNVGDTVPDCESRVTWI--WSYLESLANVGRSPDR

Query:  VLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSK
        VL   ++ R+    +    W +P   W+K++ D +          G ++RD  G   G   S  +       AE + +  GL  A E  +  +E+E DS+
Subjt:  VLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSK

Query:  VLVVAICKKQLQNSVSGFFLLECCEMLKKFRDW
        V +V   K  + +S    FL+  C    + +DW
Subjt:  VLVVAICKKQLQNSVSGFFLLECCEMLKKFRDW

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein7.8e-1528.46Show/hide
Query:  IWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGP--IIVDELKRCLSEEEFEAATV-
        IWKL V  KIK F+WR V G + TN  L+ R+I+  P C  C    ETI H  F C   + +  + +   +    GP     D L R +   + +     
Subjt:  IWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGP--IIVDELKRCLSEEEFEAATV-

Query:  -------TLWSIWNDRNKMNVGDTV--PDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGA
                +W +W  RN          PD E+R   I    E L     + +  +HV +     +  DS   W  PP  W+K + D+           G 
Subjt:  -------TLWSIWNDRNKMNVGDTV--PDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGA

Query:  IIRDFLGLRRGVSSSFRLQTMDV-LSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAI
         IR+  G    +  + +LQ+    L AEA   L  L++    G+  +  ESDSK LV  I
Subjt:  IIRDFLGLRRGVSSSFRLQTMDV-LSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAI

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-0624.24Show/hide
Query:  RHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATV---------TLWSIWNDRNKMNVGDTVPDCESR
        RH+  +  CV C  + ET++H  F C  A+L+       A    +    +      +   E E   +          LW +W  RN++       D    
Subjt:  RHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPIIVDELKRCLSEEEFEAATV---------TLWSIWNDRNKMNVGDTVPDCESR

Query:  VTWI------WSYLESLANVGRSP--DRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLS
        +         WS    L      P  +R L V               WKAPP  W+K + DA+  L   + G G I+R+  G    + +    +T +VL 
Subjt:  VTWI------WSYLESLANVGRSP--DRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLS

Query:  AEAFALLEGLRLAQEIGILNIEIESDSKVLV
        AE  AL   +          I  ESD++ LV
Subjt:  AEAFALLEGLRLAQEIGILNIEIESDSKVLV

AT3G25270.1 Ribonuclease H-like superfamily protein3.1e-1927.06Show/hide
Query:  IWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPIIVDE-----LKRCLSEEE---F
        IWKLK   KIK F+W+L+ G + T   LK+RHI   P C  C +  ET  H FF C  A+ +          +    I ++      L  CL+  +   F
Subjt:  IWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYKAMAMLQGPIIVDE-----LKRCLSEEE---F

Query:  EAATVTLWSIWNDRNKMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDS------KSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGC
          A   LW +W  RN++         +  ++W  +   +  +V    D   +V S       SR      ++  W+ PP  W+K + D +          
Subjt:  EAATVTLWSIWNDRNKMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDS------KSRIPNNGDSKCIWKAPPPNWLKLDVDASVPLCGYKVGC

Query:  GAIIRDFLGLRRGVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSK
        G ++RD  G+  G   +    T D L +E  AL+  ++ A   G   +  E DSK
Subjt:  GAIIRDFLGLRRGVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.6e-0736.67Show/hide
Query:  IWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK
        IW LK+  KIK+ +W+ +   +P    L  R+I+ +P+C  C ++ ETI+H  F C  A+
Subjt:  IWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAACATTCTAGTGTTGATAAGGAAGATGGAATTGGGATTGAGAAGAATAAGTTTGGCAATGAATTAAGCCTAATTGTGTGTAGCCCAAAGGAGAAGAAGAATAT
TGAAGATAAGAATGATGTTCGTGAAAACTTCATATTTGGGGAGTCTTCAAGAGTGAGTGAACAGAAGTGTAATCCTGGAGAAATGGTAAATGGGGCTAAGGAGAATAAGG
ATAGAGGGCTAAATTTGCTAAAAATGGAAGAAGTTAGAAAAATTATTCCTGATACTATAAATAATATGGATGTTATTCCCTCTGTTGGATTGGCTGTTGAGAATGAAGGG
ATGGAAGTAAAAAGTTCAAAGAGAAAATTTAAAAGAATGATTGGAGATAGAATGGAAGGGGACAATCACATGGCTTTAAATGTTAATGTTGGAAAGAAACGTAAAGGTGA
ACAGGAAAATGCAATTGATGCGGTTGGGAAGAAGGTTCGAGTTGCAATAGAGGAGGCTTGGATAAATTTGGTGGAGGCTGGTGTTGAGAATGATTTGGTTAAGGATTATA
TCACAGATGAAGGGTGTTGGGATGTGATTAAACTTGCCCATGTTTTAATGGAGGAGGATGTTAGATGGGTTACCTCTATTCCTTTAAGTAAAACATCAGCAACAGACAAT
TGGATGTGGCATTTTTCAAAGGATGGTAATTTTTCTGTAAAGAGTGCTCATAAAGTGTTTATGGACAGAAATTTGAATGTGTGCAGATCCAGTGTAAACAGTATACAATC
AATCTGGGATTTGATTTGGAAATTAAAGGTGCCATCCAAAATTAAAATCTTTGTGTGGAGACTTGTTCAAGGATTCATTCCTACAAATTTTGTTCTTAAACAAAGACATA
TAAATACTCAACCATGGTGTGTTTTATGCAACAAAAATGTTGAAACTATCAGTCATACCTTCTTTGGTTGCAAGCGAGCAAAGTTGCTAAACATTAATGTTGACTATAAG
GCTATGGCAATGCTCCAAGGGCCTATTATTGTTGATGAATTGAAAAGATGTCTTTCTGAAGAAGAGTTTGAAGCCGCTACTGTAACTCTGTGGTCCATATGGAATGACAG
AAACAAAATGAATGTTGGGGATACTGTTCCTGATTGTGAAAGCAGAGTAACATGGATTTGGAGTTACCTAGAGAGTCTTGCTAATGTGGGTAGATCTCCGGATCGAGTTT
TGCATGTTGATTCGAAGTCGAGGATTCCGAATAATGGTGATTCAAAATGTATATGGAAAGCTCCACCTCCAAATTGGCTTAAACTCGATGTTGATGCCTCCGTCCCTCTG
TGTGGCTATAAGGTGGGGTGTGGAGCCATTATTCGTGACTTTCTTGGGCTTCGTCGAGGTGTTTCAAGCTCTTTTCGGTTACAAACAATGGATGTTCTCTCAGCTGAAGC
TTTTGCTTTGCTTGAAGGTCTTCGTCTTGCTCAAGAAATTGGTATTTTGAATATTGAAATCGAATCTGACTCTAAAGTATTGGTTGTTGCAATTTGTAAGAAGCAACTGC
AAAATTCTGTTTCTGGTTTTTTCTTGCTGGAGTGCTGTGAAATGCTAAAGAAGTTTAGAGATTGGAAATGGTATCGCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAACATTCTAGTGTTGATAAGGAAGATGGAATTGGGATTGAGAAGAATAAGTTTGGCAATGAATTAAGCCTAATTGTGTGTAGCCCAAAGGAGAAGAAGAATAT
TGAAGATAAGAATGATGTTCGTGAAAACTTCATATTTGGGGAGTCTTCAAGAGTGAGTGAACAGAAGTGTAATCCTGGAGAAATGGTAAATGGGGCTAAGGAGAATAAGG
ATAGAGGGCTAAATTTGCTAAAAATGGAAGAAGTTAGAAAAATTATTCCTGATACTATAAATAATATGGATGTTATTCCCTCTGTTGGATTGGCTGTTGAGAATGAAGGG
ATGGAAGTAAAAAGTTCAAAGAGAAAATTTAAAAGAATGATTGGAGATAGAATGGAAGGGGACAATCACATGGCTTTAAATGTTAATGTTGGAAAGAAACGTAAAGGTGA
ACAGGAAAATGCAATTGATGCGGTTGGGAAGAAGGTTCGAGTTGCAATAGAGGAGGCTTGGATAAATTTGGTGGAGGCTGGTGTTGAGAATGATTTGGTTAAGGATTATA
TCACAGATGAAGGGTGTTGGGATGTGATTAAACTTGCCCATGTTTTAATGGAGGAGGATGTTAGATGGGTTACCTCTATTCCTTTAAGTAAAACATCAGCAACAGACAAT
TGGATGTGGCATTTTTCAAAGGATGGTAATTTTTCTGTAAAGAGTGCTCATAAAGTGTTTATGGACAGAAATTTGAATGTGTGCAGATCCAGTGTAAACAGTATACAATC
AATCTGGGATTTGATTTGGAAATTAAAGGTGCCATCCAAAATTAAAATCTTTGTGTGGAGACTTGTTCAAGGATTCATTCCTACAAATTTTGTTCTTAAACAAAGACATA
TAAATACTCAACCATGGTGTGTTTTATGCAACAAAAATGTTGAAACTATCAGTCATACCTTCTTTGGTTGCAAGCGAGCAAAGTTGCTAAACATTAATGTTGACTATAAG
GCTATGGCAATGCTCCAAGGGCCTATTATTGTTGATGAATTGAAAAGATGTCTTTCTGAAGAAGAGTTTGAAGCCGCTACTGTAACTCTGTGGTCCATATGGAATGACAG
AAACAAAATGAATGTTGGGGATACTGTTCCTGATTGTGAAAGCAGAGTAACATGGATTTGGAGTTACCTAGAGAGTCTTGCTAATGTGGGTAGATCTCCGGATCGAGTTT
TGCATGTTGATTCGAAGTCGAGGATTCCGAATAATGGTGATTCAAAATGTATATGGAAAGCTCCACCTCCAAATTGGCTTAAACTCGATGTTGATGCCTCCGTCCCTCTG
TGTGGCTATAAGGTGGGGTGTGGAGCCATTATTCGTGACTTTCTTGGGCTTCGTCGAGGTGTTTCAAGCTCTTTTCGGTTACAAACAATGGATGTTCTCTCAGCTGAAGC
TTTTGCTTTGCTTGAAGGTCTTCGTCTTGCTCAAGAAATTGGTATTTTGAATATTGAAATCGAATCTGACTCTAAAGTATTGGTTGTTGCAATTTGTAAGAAGCAACTGC
AAAATTCTGTTTCTGGTTTTTTCTTGCTGGAGTGCTGTGAAATGCTAAAGAAGTTTAGAGATTGGAAATGGTATCGCTCATGA
Protein sequenceShow/hide protein sequence
MIEHSSVDKEDGIGIEKNKFGNELSLIVCSPKEKKNIEDKNDVRENFIFGESSRVSEQKCNPGEMVNGAKENKDRGLNLLKMEEVRKIIPDTINNMDVIPSVGLAVENEG
MEVKSSKRKFKRMIGDRMEGDNHMALNVNVGKKRKGEQENAIDAVGKKVRVAIEEAWINLVEAGVENDLVKDYITDEGCWDVIKLAHVLMEEDVRWVTSIPLSKTSATDN
WMWHFSKDGNFSVKSAHKVFMDRNLNVCRSSVNSIQSIWDLIWKLKVPSKIKIFVWRLVQGFIPTNFVLKQRHINTQPWCVLCNKNVETISHTFFGCKRAKLLNINVDYK
AMAMLQGPIIVDELKRCLSEEEFEAATVTLWSIWNDRNKMNVGDTVPDCESRVTWIWSYLESLANVGRSPDRVLHVDSKSRIPNNGDSKCIWKAPPPNWLKLDVDASVPL
CGYKVGCGAIIRDFLGLRRGVSSSFRLQTMDVLSAEAFALLEGLRLAQEIGILNIEIESDSKVLVVAICKKQLQNSVSGFFLLECCEMLKKFRDWKWYRS