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Sed0020577 (gene) of Chayote v1 genome

Gene IDSed0020577
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG09:38660917..38662279
RNA-Seq ExpressionSed0020577
SyntenySed0020577
Gene Ontology termsGO:0010374 - stomatal complex development (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]3.7e-2658.78Show/hide
Query:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYE----EVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFK
        MAL +SLS S K  L +A  FF+FLPP SV GL  S  GR         +GK+ + E    E +KMVIGSRPP C NKC  CRPC AAAVVPVH+MKG K
Subjt:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYE----EVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFK

Query:  AF--YDESQVEEDSYYLLSWKCRCGNKVYKP
        AF  +  S+ EEDSYYLLSWKC+CGNK+Y+P
Subjt:  AF--YDESQVEEDSYYLLSWKCRCGNKVYKP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]5.1e-2862.2Show/hide
Query:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAF--
        MAL +SLS S K  L +A  FF+FLPP SV GL  S  GR   E+   E  + K+ EE  KMVIGSRPP C+NKC  CRPC AAAVVPVH+MKG KAF  
Subjt:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAF--

Query:  YDESQVEEDSYYLLSWKCRCGNKVYKP
        +  S+ EEDSYYLLSWKCRCGNK+Y+P
Subjt:  YDESQVEEDSYYLLSWKCRCGNKVYKP

KAG6593393.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]6.9e-3364Show/hide
Query:  MSLSCSFKWVLIVAFLFF--TFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSY--EEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYD
        MSL  SFK  L++ F FF  TFLP KS  GL W   G   KE   LEKG+ +SY  +E KKMVIGSRPP CENKC  CRPC AAAVVP H+ K FKAF  
Subjt:  MSLSCSFKWVLIVAFLFF--TFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSY--EEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYD

Query:  ESQVEEDSYYLLSWKCRCGNKVYKP
         S VE+DSYYLLSWKCRCGNK+Y+P
Subjt:  ESQVEEDSYYLLSWKCRCGNKVYKP

KAG7025740.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3262.99Show/hide
Query:  MSLSCSFKWVLIVAFLFF----TFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSY--EEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAF
        MSL  SFK  L++ F FF    TFLP KS  GL W   G   KE   LEKG+ +SY  +E KKMVIGSRPP CENKC  CRPC AAAVVP H+ K FKAF
Subjt:  MSLSCSFKWVLIVAFLFF----TFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSY--EEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAF

Query:  YDESQVEEDSYYLLSWKCRCGNKVYKP
           S VE+DSYYLLSWKCRCGNK+Y+P
Subjt:  YDESQVEEDSYYLLSWKCRCGNKVYKP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]1.3e-2659.09Show/hide
Query:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWV-----KEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGF
        MAL +SLS S K  L +A  FF+FLPP SV GL  S  GR        EMK+LE          +KMVIGSRPP C+NKC  CRPC AAAVVPVH+MKG 
Subjt:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWV-----KEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGF

Query:  KAF--YDESQVEEDSYYLLSWKCRCGNKVYKP
        KAF  +  S+ EEDSYYLLSWKC+CGNK+Y+P
Subjt:  KAF--YDESQVEEDSYYLLSWKCRCGNKVYKP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein2.5e-2862.2Show/hide
Query:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAF--
        MAL +SLS S K  L +A  FF+FLPP SV GL  S  GR   E+   E  + K+ EE  KMVIGSRPP C+NKC  CRPC AAAVVPVH+MKG KAF  
Subjt:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAF--

Query:  YDESQVEEDSYYLLSWKCRCGNKVYKP
        +  S+ EEDSYYLLSWKCRCGNK+Y+P
Subjt:  YDESQVEEDSYYLLSWKCRCGNKVYKP

A0A1S3CDZ4 Epidermal patterning factor-like protein6.1e-2759.09Show/hide
Query:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWV-----KEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGF
        MAL +SLS S K  L +A  FF+FLPP SV GL  S  GR        EMK+LE          +KMVIGSRPP C+NKC  CRPC AAAVVPVH+MKG 
Subjt:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWV-----KEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGF

Query:  KAF--YDESQVEEDSYYLLSWKCRCGNKVYKP
        KAF  +  S+ EEDSYYLLSWKC+CGNK+Y+P
Subjt:  KAF--YDESQVEEDSYYLLSWKCRCGNKVYKP

A0A2G9HXH2 Epidermal patterning factor-like protein1.4e-1844.96Show/hide
Query:  MSLSCSFKWVLIVAFLFF-----TFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHK---MKGFK
        M+LS ++K  L  AFL F     TFLP KS         G   +E        S++ EE++KM++GSRPP C NKC  C+PC A  V+P H+    +G  
Subjt:  MSLSCSFKWVLIVAFLFF-----TFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHK---MKGFK

Query:  AFYDESQVEEDSYYLLSWKCRCGNKVYKP
         + + S  E+DSYYLLSWKCRCGNK+Y+P
Subjt:  AFYDESQVEEDSYYLLSWKCRCGNKVYKP

A0A5D3CGR2 Epidermal patterning factor-like protein1.8e-2658.78Show/hide
Query:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYE----EVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFK
        MAL +SLS S K  L +A  FF+FLPP SV GL  S  GR         +GK+ + E    E +KMVIGSRPP C NKC  CRPC AAAVVPVH+MKG K
Subjt:  MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYE----EVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFK

Query:  AF--YDESQVEEDSYYLLSWKCRCGNKVYKP
        AF  +  S+ EEDSYYLLSWKC+CGNK+Y+P
Subjt:  AF--YDESQVEEDSYYLLSWKCRCGNKVYKP

A0A6P3Z138 Epidermal patterning factor-like protein1.2e-1946.28Show/hide
Query:  SLSCSFKWVLIVAFLF-FTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQV
        +L  S K  + VAF+F  + LPPKSVG  H     R+  E           +E+  KM +GSRPP C NKC  CRPC A  V+PVH++K         + 
Subjt:  SLSCSFKWVLIVAFLF-FTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQV

Query:  EEDSYYLLSWKCRCGNKVYKP
        E+DSYYLLSWKCRCGNK+++P
Subjt:  EEDSYYLLSWKCRCGNKVYKP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase3.7e-0533.33Show/hide
Query:  VKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP
        VK M   +KG         ++++GSRPP C NKC+ C PC A  V+ VH+            +    YY   W C    K+Y P
Subjt:  VKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 46.3e-0536.07Show/hide
Query:  GSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP
        GS PP C +KC KC+PC     VP+                   YY  +W+C+CGNK++ P
Subjt:  GSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP

Q9FY19 Polygalacturonase5.7e-0631.03Show/hide
Query:  GRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP
        GR  KE++  +K  +   +E     + S PP C+NKC  C+PC    ++ VH              + + YY   W C C NK+Y P
Subjt:  GRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 53.7e-0527.93Show/hide
Query:  IVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKM-VIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSW
        ++ + F  F    S   L   S G    + +    G      + K++   GS PP C  KC KC PC A   VP+              +    YY  +W
Subjt:  IVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKM-VIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSW

Query:  KCRCGNKVYKP
        +C+CGNK++ P
Subjt:  KCRCGNKVYKP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 26.3e-0532.56Show/hide
Query:  EEVKKM---VIGSRPPECEN-KCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYL-------------LSWKCRCGNKVYKP
        ++VK M   +IGSRPP CE  +C  C  C A  V    + K        S    ++ +L             +SWKC+CGN +Y P
Subjt:  EEVKKM---VIGSRPPECEN-KCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYL-------------LSWKCRCGNKVYKP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.2e-0638.71Show/hide
Query:  IGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP
        +GS PP C +KC +C PC     VPV       A           YY  +W+C+CGNK+Y P
Subjt:  IGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP

AT2G30370.2 allergen-related5.3e-0731Show/hide
Query:  SVGGLHWSSRGRWVKEMKYLEKGKSKSYE-EVKKMV--IGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP
        ++G  +    G+    +K   K   +S E E+++++  +GS PP C +KC +C PC     VPV       A           YY  +W+C+CGNK+Y P
Subjt:  SVGGLHWSSRGRWVKEMKYLEKGKSKSYE-EVKKMV--IGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP

AT3G22820.1 allergen-related2.6e-0627.93Show/hide
Query:  IVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKM-VIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSW
        ++ + F  F    S   L   S G    + +    G      + K++   GS PP C  KC KC PC A   VP+              +    YY  +W
Subjt:  IVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKM-VIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSW

Query:  KCRCGNKVYKP
        +C+CGNK++ P
Subjt:  KCRCGNKVYKP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)4.5e-0636.07Show/hide
Query:  GSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP
        GS PP C +KC KC+PC     VP+                   YY  +W+C+CGNK++ P
Subjt:  GSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYLLSWKCRCGNKVYKP

AT4G37810.1 unknown protein4.5e-0632.56Show/hide
Query:  EEVKKM---VIGSRPPECEN-KCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYL-------------LSWKCRCGNKVYKP
        ++VK M   +IGSRPP CE  +C  C  C A  V    + K        S    ++ +L             +SWKC+CGN +Y P
Subjt:  EEVKKM---VIGSRPPECEN-KCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYYL-------------LSWKCRCGNKVYKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGTCAATGTCTCTTTCTTGTTCCTTCAAATGGGTTCTCATTGTTGCCTTCTTGTTCTTCACATTTCTTCCTCCTAAATCAGTGGGGGGGCTGCATTGGTCAAG
CAGAGGCAGATGGGTAAAAGAGATGAAATATTTGGAAAAGGGTAAAAGTAAAAGTTACGAAGAGGTTAAAAAAATGGTGATCGGATCACGGCCGCCGGAATGTGAGAACA
AGTGCAATAAATGCCGGCCGTGCACGGCGGCGGCGGTGGTTCCGGTGCACAAAATGAAGGGCTTCAAAGCCTTTTATGATGAGTCTCAAGTGGAAGAAGATAGTTATTAT
CTTTTATCATGGAAATGTCGATGTGGGAATAAGGTTTATAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATCAATCCAACTTCTTTGTTTCTTCATTTCTCTTCCAATGTCCTTGTTTTATGTCTCTTCCACATAAAACATTTCTCAACCTTCTCCAAATACTCACAATTTCTCTTCAT
TAATAAACCCAACATTGTTTGTGAAACTTTGCCTATAATTCTTGCTTGCAAATCTCATGAGGCTACTTTTTTTCCTCCAATCACTTGATGGCTTTGTCAATGTCTCTTTC
TTGTTCCTTCAAATGGGTTCTCATTGTTGCCTTCTTGTTCTTCACATTTCTTCCTCCTAAATCAGTGGGGGGGCTGCATTGGTCAAGCAGAGGCAGATGGGTAAAAGAGA
TGAAATATTTGGAAAAGGGTAAAAGTAAAAGTTACGAAGAGGTTAAAAAAATGGTGATCGGATCACGGCCGCCGGAATGTGAGAACAAGTGCAATAAATGCCGGCCGTGC
ACGGCGGCGGCGGTGGTTCCGGTGCACAAAATGAAGGGCTTCAAAGCCTTTTATGATGAGTCTCAAGTGGAAGAAGATAGTTATTATCTTTTATCATGGAAATGTCGATG
TGGGAATAAGGTTTATAAACCCTAG
Protein sequenceShow/hide protein sequence
MALSMSLSCSFKWVLIVAFLFFTFLPPKSVGGLHWSSRGRWVKEMKYLEKGKSKSYEEVKKMVIGSRPPECENKCNKCRPCTAAAVVPVHKMKGFKAFYDESQVEEDSYY
LLSWKCRCGNKVYKP