; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020579 (gene) of Chayote v1 genome

Gene IDSed0020579
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG08:34963279..34964755
RNA-Seq ExpressionSed0020579
SyntenySed0020579
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009645 - response to low light intensity stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137413.1 chlorophyll a-b binding protein P4, chloroplastic [Cucumis sativus]1.8e-13693.57Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV+TQASA VFRPCASRSRFLSGSSGKFNRAL VKP TSS+P AFKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGM+LPEVLT++GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL
        +EKEIANGRLAMLAFLGFI+QHNVTGKGPFDNF+QHISDPWHNTIVQTL
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL

XP_022137160.1 chlorophyll a-b binding protein P4, chloroplastic-like [Momordica charantia]1.1e-13894.82Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MAT MTQASAAVFRPCASRSRFLSGSSGKFNRAL VKP  SS+PC FKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTI+QTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

XP_022949090.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]1.1e-13594.02Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QASAAVFRP ASRSRFL GSSGKFNRAL VKP TS VP +FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

XP_023524863.1 chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita pepo subsp. pepo]1.3e-13694.42Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QASAAVFRP ASRSRFLSGSSGKFNRAL VKP TSSVP +FKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

XP_038894825.1 chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]1.0e-13694.02Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATVMTQASA+VFRPC  RSRFLS +SGKFNR L VKP TSSVP +FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTIVQTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

TrEMBL top hitse value%identityAlignment
A0A0A0LTE5 Chlorophyll a-b binding protein, chloroplastic8.5e-13793.57Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV+TQASA VFRPCASRSRFLSGSSGKFNRAL VKP TSS+P AFKVEAKKGEWLPGLPSP YLDGSL GDNGFDPLGLAEDPENLRWY QAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGM+LPEVLT++GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL
        +EKEIANGRLAMLAFLGFI+QHNVTGKGPFDNF+QHISDPWHNTIVQTL
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL

A0A2C9UJS9 Chlorophyll a-b binding protein, chloroplastic2.0e-13088.45Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV TQASAAVFRPCASRSRFL+GSSGK NR +  KP  SS   +FKVEAKKGEWLPGLPSPAYL+GSL GDNGFDPLGLAEDPENL+W++QAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV T  GIINVP+WYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPN+VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKE+ANGRLAMLAFLGF++QHNVTGKGPFDN LQH+SDPWHNTIVQTLSG
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

A0A6J1C5V9 Chlorophyll a-b binding protein, chloroplastic5.3e-13994.82Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MAT MTQASAAVFRPCASRSRFLSGSSGKFNRAL VKP  SS+PC FKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTI+QTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

A0A6J1GBT1 Chlorophyll a-b binding protein, chloroplastic5.5e-13694.02Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QASAAVFRP ASRSRFL GSSGKFNRAL VKP TS VP +FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS+GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

A0A6J1KDI3 Chlorophyll a-b binding protein, chloroplastic7.2e-13694.02Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        M+ VM QASAAVFRP ASRSRFLSGSSGKFNRAL VKP TS VP +FKVEAKKGEWLPGLPSPAYLDGSL GDNGFDPLGLAEDPENLRWYVQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF+PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNT+VQTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic1.9e-6148.54Show/hide
Query:  SRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTS
        +++ FL G   + ++      A S+       +  +  W PG   P +LDGSL GD GFDPLGLA DPE+LRW  QAELV+ RWAMLG AG+ +PE+LT 
Subjt:  SRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTS

Query:  FGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----QPTLEAKEKEIANGRLA
         GI+N P WY AG+ EYF  ++TLF++E +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E + KEI NGRLA
Subjt:  FGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----QPTLEAKEKEIANGRLA

Query:  MLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS
        MLA +G   QH  TG GP DN   H++DP H TI    S
Subjt:  MLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS

P13869 Chlorophyll a-b binding protein, chloroplastic3.3e-6148.33Show/hide
Query:  ASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLT
        A+++ FL G   + ++ +    + S    A   +  +  W PG   P +LDGSL GD GFDPLGL  DPE+L+W  QAELV+ RWAMLG AG+ +PE LT
Subjt:  ASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLT

Query:  SFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----QPTLEAKEKEIANGRL
          G++N P WY AG+ EYF  ++TLFVIE +L  + E RRW DI  PG VN DPIF    L   DVGYPGG+ F+PL +         E + KEI NGRL
Subjt:  SFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----QPTLEAKEKEIANGRL

Query:  AMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS
        AMLA +G   QH  TG GP DN   H++DP H TI    S
Subjt:  AMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS

P27521 Chlorophyll a-b binding protein 4, chloroplastic2.8e-12181.27Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRAL-YVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATV T ASA++FRPC S+ RFL+GSSG+ NR L +    +S+   +FKVEAKKGEWLPGL SP YL GSLAGDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRAL-YVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLE
        RWAMLGVAGMLLPEV T  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLE

Query:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS
        AKEKE+ANGRLAMLAFLGF++QHNVTGKGPF+N LQH+SDPWHNTIVQT +
Subjt:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS

Q36718 Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment)7.0e-8867.84Show/hide
Query:  KFNRALYVKPATSSVPCAFKVEA---KKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTSFGIINVPK
        +F   +   PA S  P + + +     KG WLPGL SPAYLDGSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGML+PEVLT  G++N P+
Subjt:  KFNRALYVKPATSSVPCAFKVEA---KKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTSFGIINVPK

Query:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEAKEKEIANGRLAMLAFLGFIIQHNV
        W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPIFK YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLAFLGF++QHNV
Subjt:  WYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEAKEKEIANGRLAMLAFLGFIIQHNV

Query:  TGKGPFDNFLQHISDPWHNTIVQTLSG
         GKGPF+N  QH++DPWHNTI+QT+SG
Subjt:  TGKGPFDNFLQHISDPWHNTIVQTLSG

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.9e-12585.66Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR
        MATV TQASAA+F PC  +SRFL GSSGK NR +  +P   S   +FKVEAKKGEWLPGL SP YL GSL GDNGFDPLGLAEDPENLRW+VQAELVNGR
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGR

Query:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA
        WAMLGVAGMLLPEV TS GIINVPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PTLEA
Subjt:  WAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEA

Query:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG
        KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDN LQHISDPWHNTIVQTL G
Subjt:  KEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLSG

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 62.0e-5341.67Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSS--GKF--NRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAEL
        + + +T +++ V  P   R    S SS  G+    R + V+           +   +  W PG   P +LDGSL GD GFDPLGL  DP+ L+W+ QAEL
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSS--GKF--NRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAEL

Query:  VNGRWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF--
        ++ RWAML V G+++PE L   G I    WYDAG  EYFA S+TLFV + +L  + E RRW D+  PGSV+ +P +     P  DVGYPGG++       
Subjt:  VNGRWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNF--

Query:  ----QPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWH
            +P +  + KEI NGRLAMLAFLGF  Q   T + P +N + H++DP H
Subjt:  ----QPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWH

AT1G45474.1 photosystem I light harvesting complex gene 51.6e-5851.9Show/hide
Query:  VEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEY-FASSSTLFVIEFI
        V  ++  WLPGL  P YLDG+LAGD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++L + GI N+P WY+AG  ++ FAS+ TL V++F+
Subjt:  VEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEY-FASSSTLFVIEFI

Query:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPL----NFQPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISD
        L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL    + Q   + K KEI NGRLAM+A LGF +Q +VT  GP DN ++H+S+
Subjt:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPL----NFQPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISD

Query:  PWHNTIVQTL
        PWH TI+QTL
Subjt:  PWHNTIVQTL

AT1G45474.2 photosystem I light harvesting complex gene 51.6e-5851.9Show/hide
Query:  VEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEY-FASSSTLFVIEFI
        V  ++  WLPGL  P YLDG+LAGD GFDPLGL EDPE+L+WYVQAELV+ R+AMLGVAG+L  ++L + GI N+P WY+AG  ++ FAS+ TL V++F+
Subjt:  VEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEY-FASSSTLFVIEFI

Query:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPL----NFQPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISD
        L  + E +R+ D  +PGS  ++  F    + +L   + GYPGG + NPL    + Q   + K KEI NGRLAM+A LGF +Q +VT  GP DN ++H+S+
Subjt:  LFHYVEIRRWQDIKNPGSVNQDPIF---KQYSLPPNDVGYPGG-IFNPL----NFQPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISD

Query:  PWHNTIVQTL
        PWH TI+QTL
Subjt:  PWHNTIVQTL

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A42.0e-12281.27Show/hide
Query:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRAL-YVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG
        MATV T ASA++FRPC S+ RFL+GSSG+ NR L +    +S+   +FKVEAKKGEWLPGL SP YL GSLAGDNGFDPLGLAEDPENL+W+VQAELVNG
Subjt:  MATVMTQASAAVFRPCASRSRFLSGSSGKFNRAL-YVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNG

Query:  RWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLE
        RWAMLGVAGMLLPEV T  GIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPGGIFNPLNF PT E
Subjt:  RWAMLGVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLE

Query:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS
        AKEKE+ANGRLAMLAFLGF++QHNVTGKGPF+N LQH+SDPWHNTIVQT +
Subjt:  AKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIVQTLS

AT3G61470.1 photosystem I light harvesting complex gene 21.5e-6149.39Show/hide
Query:  ASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGE---WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAML
        AS+A+     S   FL G   +  + L V PA S    + +  A   +   W PG   P +LDGSL GD GFDPLGL+ DP++L+W VQAE+V+ RWAML
Subjt:  ASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGE---WLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAML

Query:  GVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----QPTL
        G AG+ +PE LT  GI+N P WY AG+ EYF   +TLFV+E IL  + E RRW DI  PGSVN DP+F    L   DVGYPGG+ F+PL +         
Subjt:  GVAGMLLPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGI-FNPLNF-----QPTL

Query:  EAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTI
        E + KEI NGRLAMLA +G   QH  TG GP DN   H++DP H TI
Subjt:  EAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGTCATGACCCAGGCTTCTGCCGCTGTCTTCCGGCCGTGCGCGTCGAGATCCAGGTTTCTTTCTGGGTCGTCGGGAAAGTTTAACCGAGCTTTGTACGTTAA
GCCAGCAACTTCTTCGGTTCCTTGTGCTTTCAAAGTAGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCACCAGCTTACCTTGATGGCAGTCTAGCAGGTGACA
ATGGATTTGACCCCTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTCGTGAACGGCCGATGGGCGATGCTCGGAGTTGCGGGAATGCTA
TTACCTGAAGTCCTCACAAGTTTCGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCGTCGTCGACTCTGTTTGTGATCGAGTTCAT
TCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAATGATGTTGGAT
ATCCAGGGGGAATTTTCAACCCACTCAACTTTCAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGTTGGCATTCTTGGGATTCATTATT
CAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTTTTGCAGCACATTTCAGATCCATGGCACAACACTATTGTTCAGACACTAAGTGGATAA
mRNA sequenceShow/hide mRNA sequence
CTTTCTAGCCCTTGATTTCCAACAACAAGTGAACACCATAAACATAAATGCCATTATAATGGCATGCAGAAAATGAACTTCTTGAACTGTAAATCCAAAGCCAAGCTTTC
TTCTACCATTACCTGAGGGAAAAATGGCCACTGTCATGACCCAGGCTTCTGCCGCTGTCTTCCGGCCGTGCGCGTCGAGATCCAGGTTTCTTTCTGGGTCGTCGGGAAAG
TTTAACCGAGCTTTGTACGTTAAGCCAGCAACTTCTTCGGTTCCTTGTGCTTTCAAAGTAGAGGCCAAGAAAGGAGAGTGGTTACCAGGTTTGCCATCACCAGCTTACCT
TGATGGCAGTCTAGCAGGTGACAATGGATTTGACCCCTTGGGACTTGCAGAGGACCCTGAAAACTTGAGGTGGTATGTGCAAGCAGAGCTCGTGAACGGCCGATGGGCGA
TGCTCGGAGTTGCGGGAATGCTATTACCTGAAGTCCTCACAAGTTTCGGAATCATCAACGTACCGAAATGGTACGATGCTGGGAAAGCCGAGTATTTCGCATCGTCGTCG
ACTCTGTTTGTGATCGAGTTCATTCTGTTCCACTATGTGGAAATCAGAAGATGGCAAGACATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAG
CTTGCCACCAAATGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTCAACCAACTCTTGAAGCCAAGGAAAAGGAGATTGCTAATGGAAGATTGGCAATGT
TGGCATTCTTGGGATTCATTATTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTTTTGCAGCACATTTCAGATCCATGGCACAACACTATTGTTCAGACACTA
AGTGGATAAGGTTAATAAAATCTGTACAAGAATATGAATCTAGTATGTATAATTATGCAGCATGGTTTAGCTAAGCAAGAAATTTCGCAATCACGCCGCCTTCTTTATTT
TTCTCGAGCTTGATATAAAGTATATGAAATTCGCTTCCA
Protein sequenceShow/hide protein sequence
MATVMTQASAAVFRPCASRSRFLSGSSGKFNRALYVKPATSSVPCAFKVEAKKGEWLPGLPSPAYLDGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGML
LPEVLTSFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFQPTLEAKEKEIANGRLAMLAFLGFII
QHNVTGKGPFDNFLQHISDPWHNTIVQTLSG