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Sed0020594 (gene) of Chayote v1 genome

Gene IDSed0020594
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:31141341..31146819
RNA-Seq ExpressionSed0020594
SyntenySed0020594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587609.1 hypothetical protein SDJN03_16174, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0442.98Show/hide
Query:  EQENNDAPISSSSDQEKKNAPTS------------SSSDQDLDVLLLGIL--------------ETTMKVQCRSAAGVFSHQIIWPNHDPIKPKSYLSIR
        ++E   AP SSSSDQEKK A TS            SSSDQDLDV LLG L              +        S+ G         N DPIKPKS  S R
Subjt:  EQENNDAPISSSSDQEKKNAPTS------------SSSDQDLDVLLLGIL--------------ETTMKVQCRSAAGVFSHQIIWPNHDPIKPKSYLSIR

Query:  AVLASALVLEKGVI
        A LASA VLEK  +
Subjt:  AVLASALVLEKGVI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGTTTCGGGATCTTCCACTCGAAGGTCTAAGTGCTATATGGGAACAGGAGAACAACGATGCCCCAATCTCCTCATCGAGTGATCAGGAGAAGAAAAATGCTCC
AACCTCCTCATCAAGTGACCAAGACTTGGATGTATTGCTTCTAGGGATCTTGGAGACAACGATGAAGGTGCAGTGTAGGTCAGCAGCAGGAGTGTTTTCACATCAAATCA
TTTGGCCAAATCATGATCCAATAAAACCCAAATCTTATCTCTCCATTAGAGCAGTTCTTGCATCTGCACTTGTGCTGGAAAAAGGGGTAATCTTTTTCTCATCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGTTTCGGGATCTTCCACTCGAAGGTCTAAGTGCTATATGGGAACAGGAGAACAACGATGCCCCAATCTCCTCATCGAGTGATCAGGAGAAGAAAAATGCTCC
AACCTCCTCATCAAGTGACCAAGACTTGGATGTATTGCTTCTAGGGATCTTGGAGACAACGATGAAGGTGCAGTGTAGGTCAGCAGCAGGAGTGTTTTCACATCAAATCA
TTTGGCCAAATCATGATCCAATAAAACCCAAATCTTATCTCTCCATTAGAGCAGTTCTTGCATCTGCACTTGTGCTGGAAAAAGGGGTAATCTTTTTCTCATCCTTTTGA
Protein sequenceShow/hide protein sequence
MDTFRDLPLEGLSAIWEQENNDAPISSSSDQEKKNAPTSSSSDQDLDVLLLGILETTMKVQCRSAAGVFSHQIIWPNHDPIKPKSYLSIRAVLASALVLEKGVIFFSSF