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Sed0020601 (gene) of Chayote v1 genome

Gene IDSed0020601
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:34888819..34890360
RNA-Seq ExpressionSed0020601
SyntenySed0020601
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY05362.1 Uncharacterized protein TCM_020382 isoform 1 [Theobroma cacao]1.3e-1855.05Show/hide
Query:  EQRDGVNQKWSNHELQHANGNGNGPGG-------------IPLDFPNLKSNLKKKTNKDKEN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGV
        E++DGV ++  N E Q  +   NG GG             I L  P  KSNLKK T  D+EN   +E RKV+WPDAHGK+IAH+QEFEPS S DGELEGV
Subjt:  EQRDGVNQKWSNHELQHANGNGNGPGG-------------IPLDFPNLKSNLKKKTNKDKEN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGV

Query:  RNSCVCTIQ
        RNSCVC IQ
Subjt:  RNSCVCTIQ

KAF3972265.1 hypothetical protein CMV_004221 [Castanea mollissima]5.2e-2057.58Show/hide
Query:  EQRDGVNQKWSNHELQHANG----NGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ
        E+RDGV ++  NHEL+  NG      +G  G  ++ P LKSNLKK T  D      E RKV+WPDAHGK+IAH+ EFEPS S DGEL GVRNSCVC IQ
Subjt:  EQRDGVNQKWSNHELQHANG----NGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ

KAG6593791.1 hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3367.52Show/hide
Query:  NCNDDDKTPT--TPKLLFEQRDGVNQKW-SNHELQHANGNGNGPGGIPLDFPNLKSNLKKKT---NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSAS
        N  +  KT T    + + E+RDGV QKW +NHELQ  +GNGNG  GI L+ PNLKSNLKKKT    +++E CP+ETRKVNWPDAHGK+IAHIQEF+PS S
Subjt:  NCNDDDKTPT--TPKLLFEQRDGVNQKW-SNHELQHANGNGNGPGGIPLDFPNLKSNLKKKT---NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSAS

Query:  GDGELEGVRNSCVCTIQ
        GDGELEGVRNSCVCTIQ
Subjt:  GDGELEGVRNSCVCTIQ

KAG7026120.1 hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-3367.52Show/hide
Query:  NCNDDDKTPT--TPKLLFEQRDGVNQKW-SNHELQHANGNGNGPGGIPLDFPNLKSNLKKKT---NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSAS
        N  +  KT T    + + E+RDGV QKW +NHELQ  +GNGNG  GI L+ PNLKSNLKKKT    +++E CP+ETRKVNWPDAHGK+IAHIQEF+PS S
Subjt:  NCNDDDKTPT--TPKLLFEQRDGVNQKW-SNHELQHANGNGNGPGGIPLDFPNLKSNLKKKT---NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSAS

Query:  GDGELEGVRNSCVCTIQ
        GDGELEGVRNSCVCTIQ
Subjt:  GDGELEGVRNSCVCTIQ

XP_024931762.1 uncharacterized protein LOC112492388 [Ziziphus jujuba]7.4e-1943.18Show/hide
Query:  KWTTNCNDDDKTPTTPKLL-------FEQRDGVNQKWSNHELQHA----------NGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAH
        K   N  +DD    +  ++        E++DGV ++  N+E +            N   +G  G  ++  NLKSNLKK   ++     +E RKV+WPDAH
Subjt:  KWTTNCNDDDKTPTTPKLL-------FEQRDGVNQKWSNHELQHA----------NGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAH

Query:  GKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ
        GK+IAH+QEFEPS S DGELEGVRNSCVC IQ
Subjt:  GKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ

TrEMBL top hitse value%identityAlignment
A0A061ELW3 Uncharacterized protein isoform 16.2e-1955.05Show/hide
Query:  EQRDGVNQKWSNHELQHANGNGNGPGG-------------IPLDFPNLKSNLKKKTNKDKEN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGV
        E++DGV ++  N E Q  +   NG GG             I L  P  KSNLKK T  D+EN   +E RKV+WPDAHGK+IAH+QEFEPS S DGELEGV
Subjt:  EQRDGVNQKWSNHELQHANGNGNGPGG-------------IPLDFPNLKSNLKKKTNKDKEN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGV

Query:  RNSCVCTIQ
        RNSCVC IQ
Subjt:  RNSCVCTIQ

A0A2I4F605 uncharacterized protein LOC1089958856.2e-1947.9Show/hide
Query:  TNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQ-------HANGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPS
        +N N ++    +P    ++ DG  +++ NHELQ        +N    G  G  ++ P LKSNLKK+T  D      E RKV+W DAHGK+IAH+QEFEPS
Subjt:  TNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQ-------HANGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPS

Query:  ASGDGELEGVRNSCVCTIQ
         S DGEL GVRNSCVC IQ
Subjt:  ASGDGELEGVRNSCVCTIQ

A0A5D2D9X9 Uncharacterized protein (Fragment)1.2e-1753.33Show/hide
Query:  RDGVNQKWSN-------HELQHANG---NGNGPGGIPLD-FPNLKSNLKKKTNKDKEN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSC
        +DGV ++  N       HE++  NG   + +G  G  ++  P LKSNLKK T  D+EN   ++ RKV+WPDAHGK+IAH+QEFEPS S DGEL GVRNSC
Subjt:  RDGVNQKWSN-------HELQHANG---NGNGPGGIPLD-FPNLKSNLKKKTNKDKEN-CPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSC

Query:  VCTIQ
        VC IQ
Subjt:  VCTIQ

A0A6P6GC85 uncharacterized protein LOC1124923883.6e-1943.18Show/hide
Query:  KWTTNCNDDDKTPTTPKLL-------FEQRDGVNQKWSNHELQHA----------NGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAH
        K   N  +DD    +  ++        E++DGV ++  N+E +            N   +G  G  ++  NLKSNLKK   ++     +E RKV+WPDAH
Subjt:  KWTTNCNDDDKTPTTPKLL-------FEQRDGVNQKWSNHELQHA----------NGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAH

Query:  GKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ
        GK+IAH+QEFEPS S DGELEGVRNSCVC IQ
Subjt:  GKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ

A0A7N2LXE2 Uncharacterized protein3.1e-1860.23Show/hide
Query:  NHELQHANG----NGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ
        NHELQ  NG      +G  G  ++ P LKSNLKK T  D      E RKV+WPDAHGK+IAH+ EFEPS S DGEL GVRNSCVC IQ
Subjt:  NHELQHANG----NGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22790.1 unknown protein7.2e-0448.84Show/hide
Query:  RKVNWPDAHGKNIAHIQEFEPSASG--DGELE-GVRNSCVCTI
        RKV WPDA G  +  ++EFEPS  G  D E E G + +C C I
Subjt:  RKVNWPDAHGKNIAHIQEFEPSASG--DGELE-GVRNSCVCTI

AT1G22790.2 unknown protein7.2e-0448.84Show/hide
Query:  RKVNWPDAHGKNIAHIQEFEPSASG--DGELE-GVRNSCVCTI
        RKV WPDA G  +  ++EFEPS  G  D E E G + +C C I
Subjt:  RKVNWPDAHGKNIAHIQEFEPSASG--DGELE-GVRNSCVCTI

AT1G34010.1 unknown protein8.5e-0539.19Show/hide
Query:  LKSNLKKKT-----------NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELE---GVRNSCVCTI
        LKS+LKK++           ++D      + RKV WPD  G  IA ++EFEPS   + E E   G   SC+CTI
Subjt:  LKSNLKKKT-----------NKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELE---GVRNSCVCTI

AT1G55475.1 unknown protein2.9e-0532.14Show/hide
Query:  TTNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQHANGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGE
        +T+ +DDD      + + E  DG+       E+      G   G    D   LKS+L+K  +   E    E +KV W D  GK +A I+EFEPS   D +
Subjt:  TTNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQHANGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGE

Query:  LEGVRNSCVCTI
         +  + +CVC I
Subjt:  LEGVRNSCVCTI

AT3G13480.1 unknown protein1.7e-0543.33Show/hide
Query:  LKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTI
        LKS+LKK+     +    E +KV W D  GK +A I+EFE S   D   +G   SCVC I
Subjt:  LKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASGDGELEGVRNSCVCTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATGACTCTGCTTTTTCCCAATCTGTTTAAGTGGACAACAAACTGTAATGATGATGACAAAACACCCACCACTCCCAAATTACTTTTTGAACAGAGAGATGGGGT
CAACCAAAAATGGAGTAATCATGAACTTCAACATGCTAATGGAAATGGAAATGGGCCTGGTGGGATTCCCTTGGATTTCCCAAATCTCAAGAGCAATTTGAAGAAAAAGA
CTAATAAGGACAAGGAGAATTGTCCTTCAGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGAAAAAATATTGCTCATATCCAAGAGTTTGAACCAAGTGCATCAGGA
GATGGGGAGCTTGAGGGAGTAAGGAACTCTTGTGTCTGCACAATTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCATGACTCTGCTTTTTCCCAATCTGTTTAAGTGGACAACAAACTGTAATGATGATGACAAAACACCCACCACTCCCAAATTACTTTTTGAACAGAGAGATGGGGT
CAACCAAAAATGGAGTAATCATGAACTTCAACATGCTAATGGAAATGGAAATGGGCCTGGTGGGATTCCCTTGGATTTCCCAAATCTCAAGAGCAATTTGAAGAAAAAGA
CTAATAAGGACAAGGAGAATTGTCCTTCAGAAACAAGGAAAGTGAACTGGCCTGATGCCCATGGAAAAAATATTGCTCATATCCAAGAGTTTGAACCAAGTGCATCAGGA
GATGGGGAGCTTGAGGGAGTAAGGAACTCTTGTGTCTGCACAATTCAATAA
Protein sequenceShow/hide protein sequence
MIMTLLFPNLFKWTTNCNDDDKTPTTPKLLFEQRDGVNQKWSNHELQHANGNGNGPGGIPLDFPNLKSNLKKKTNKDKENCPSETRKVNWPDAHGKNIAHIQEFEPSASG
DGELEGVRNSCVCTIQ