; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020607 (gene) of Chayote v1 genome

Gene IDSed0020607
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG09:32027016..32027429
RNA-Seq ExpressionSed0020607
SyntenySed0020607
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143645.1 S-protein homolog 1-like [Momordica charantia]2.6e-4166.36Show/hide
Query:  WHVHVVNGLSNANLLVHCKSKDDNLAMK------QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNP
        WH+HVVNGLS   L VHCKSKDD+L +        EF+WTF+ N W TTLYWC L+KPNADVSFE+FW+E+ H+WL+  C  K C+WTAKDDGIYLRNNP
Subjt:  WHVHVVNGLSNANLLVHCKSKDDNLAMK------QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNP

Query:  DGVDELIHKW
        DGVDE IH+W
Subjt:  DGVDELIHKW

XP_022959899.1 S-protein homolog 1-like [Cucurbita moschata]2.8e-4362.5Show/hide
Query:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV
        AFLL      LTQP AMA+ I P Q W VHVVN L+NA L VHCKSKDD+L       +  EF+W+FK N+W TTL+WC L+KPNA VSFEAFWIEK H+
Subjt:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV

Query:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW
        WL   C G  C+WTA+DDG+YLRNNPD VDE +HKW
Subjt:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW

XP_023004728.1 S-protein homolog 1-like [Cucurbita maxima]1.5e-4463.97Show/hide
Query:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV
        AFLL      LTQP AMA+ I P Q W VHVVN L+NA L VHCKSKDD+L       +  EF+W+FK N+W TTL+WC L+KPNA VSFEAFWIEK H+
Subjt:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV

Query:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW
        WL   C G+ C+WTAKDDG+YLRNNPDGVDE +HKW
Subjt:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW

XP_023514588.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.1e-4261.76Show/hide
Query:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV
        AFLL      LTQP AMA+ I P Q W VHVVN L+NA L VHCKSKDD+L       +  EF+W+FK N+W TTL+WC L+KPNA VSFEAFWIEK H+
Subjt:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV

Query:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW
        WL   C G  C+WTA++DG+YLRNNPD VDE +HKW
Subjt:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]2.8e-4361.36Show/hide
Query:  LLILTQPFAMA----VIPPYQTWHVHVVNGLSNANLLVHCKSKDDNLAMKQ------EFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLEC
        L+++ QP   A    V  P Q WHVHVVNGL NA L VHCKSKDD+L  +       EF+W+FK NIW+TTLYWC+L KPNADVSF+AFW+E+ H+WL  
Subjt:  LLILTQPFAMA----VIPPYQTWHVHVVNGLSNANLLVHCKSKDDNLAMKQ------EFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLEC

Query:  GCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW
         CM + C W AKDDGIYLRNNPD VDE +HKW
Subjt:  GCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog4.6e-3656.69Show/hide
Query:  LILTQPFAMAVIPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGK
        ++L QP + AV  P   WH+HVVNGL N  L VHCKSKDD+L         QE +WTFK N + TTL+WC L+KPN  V+FE+FW+EK H WL   C  K
Subjt:  LILTQPFAMAVIPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGK

Query:  RCVWTAKDDGIYLRNNPDGVDELIHKW
         C+W AKDDGIYLRNN   VDEL+H W
Subjt:  RCVWTAKDDGIYLRNNPDGVDELIHKW

A0A6J1CPC6 S-protein homolog1.3e-4166.36Show/hide
Query:  WHVHVVNGLSNANLLVHCKSKDDNLAMK------QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNP
        WH+HVVNGLS   L VHCKSKDD+L +        EF+WTF+ N W TTLYWC L+KPNADVSFE+FW+E+ H+WL+  C  K C+WTAKDDGIYLRNNP
Subjt:  WHVHVVNGLSNANLLVHCKSKDDNLAMK------QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNP

Query:  DGVDELIHKW
        DGVDE IH+W
Subjt:  DGVDELIHKW

A0A6J1DPJ1 S-protein homolog4.9e-3855.56Show/hide
Query:  LLILTQPFAMAV-IP-PYQTWHVHVVNGLS-NANLLVHCKSKDDNLAMK------QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECG
        +L++ +P  +A+ +P P   W++HVVNGLS NA L VHCKSKDD+L          E +WTF+ N W+TTLYWC + KPNADVSF++FW+EK H+WL   
Subjt:  LLILTQPFAMAV-IP-PYQTWHVHVVNGLS-NANLLVHCKSKDDNLAMK------QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECG

Query:  CMGKRCVWTAKDDGIYLRNNPDGVDELIHKWGHKL
        C    C+WTAKDDGIYLRN P+  DEL+HKW  KL
Subjt:  CMGKRCVWTAKDDGIYLRNNPDGVDELIHKWGHKL

A0A6J1H9E9 S-protein homolog1.3e-4362.5Show/hide
Query:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV
        AFLL      LTQP AMA+ I P Q W VHVVN L+NA L VHCKSKDD+L       +  EF+W+FK N+W TTL+WC L+KPNA VSFEAFWIEK H+
Subjt:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV

Query:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW
        WL   C G  C+WTA+DDG+YLRNNPD VDE +HKW
Subjt:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW

A0A6J1L0E8 S-protein homolog7.1e-4563.97Show/hide
Query:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV
        AFLL      LTQP AMA+ I P Q W VHVVN L+NA L VHCKSKDD+L       +  EF+W+FK N+W TTL+WC L+KPNA VSFEAFWIEK H+
Subjt:  AFLL-----ILTQPFAMAV-IPPYQTWHVHVVNGLSNANLLVHCKSKDDNL------AMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHV

Query:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW
        WL   C G+ C+WTAKDDG+YLRNNPDGVDE +HKW
Subjt:  WLECGCMGKRCVWTAKDDGIYLRNNPDGVDELIHKW

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 16.9e-2139.32Show/hide
Query:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSKDD-----NLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG
        ++P    W V VVNGL+    L +HCKSK+D     NL  +  F W F  N+  +T +WC + K N  ++   FW + + ++  CG   K C+WTAK DG
Subjt:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSKDD-----NLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG

Query:  IYLRNNPDGVDELIHKW
        +YL N+  G D L  KW
Subjt:  IYLRNNPDGVDELIHKW

O23020 S-protein homolog 59.6e-0730.69Show/hide
Query:  IPPYQTWHVHVV---NGLSNANLLVHCKSKDDNLAM-----KQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDD
        +PP+  W   VV   N +    L +HCKSK D+L +     KQE+ + F+ N+W++TL++C+ Q  +   SF+ +  ++     +       C W  K D
Subjt:  IPPYQTWHVHVV---NGLSNANLLVHCKSKDDNLAM-----KQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDD

Query:  G
        G
Subjt:  G

Q2HQ46 S-protein homolog 742.2e-1941.03Show/hide
Query:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSK-----DDNLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG
        V+P    W V V NGL+    L +HCKSK     D NL     F W F  N+  +TL+WC + K +  ++ + FW + I   L   C  K CVWTAK+DG
Subjt:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSK-----DDNLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG

Query:  IYLRNNPDGVDELIHKW
        +YL N+  G D L  KW
Subjt:  IYLRNNPDGVDELIHKW

Q9LVX2 S-protein homolog 311.2e-0430.25Show/hide
Query:  MAFLLILTQPFAMAVIPPYQTWHVHVVNGL-SNANLLVHCKSKDDNLAMK-----QEFKWTFKTNIWQTTLYWCTL-QKPNADVSFEAFWIEKIHVWLEC
        M  L +    F++ +        + +VN L S+ NL + C SK+D +  K      ++  +F+ NIW TT + CTL Q+PN    ++ F   K +   + 
Subjt:  MAFLLILTQPFAMAVIPPYQTWHVHVVNGL-SNANLLVHCKSKDDNLAMK-----QEFKWTFKTNIWQTTLYWCTL-QKPNADVSFEAFWIEKIHVWLEC

Query:  GCMGKRCVWTAKDDGIYLR
        G       W A++DGIYL+
Subjt:  GCMGKRCVWTAKDDGIYLR

Q9LW22 S-protein homolog 212.1e-0633.7Show/hide
Query:  NANLL-VHCKSKDDNLAMK-----QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCM---GKRCVWTAKDDGIYLRNN
        N N+L VHCKSK++++ +K     +   ++FKTN W TT +WC L K      +       I  +   G     G    W A+DDGIY   +
Subjt:  NANLL-VHCKSKDDNLAMK-----QEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCM---GKRCVWTAKDDGIYLRNN

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 14.9e-2239.32Show/hide
Query:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSKDD-----NLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG
        ++P    W V VVNGL+    L +HCKSK+D     NL  +  F W F  N+  +T +WC + K N  ++   FW + + ++  CG   K C+WTAK DG
Subjt:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSKDD-----NLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG

Query:  IYLRNNPDGVDELIHKW
        +YL N+  G D L  KW
Subjt:  IYLRNNPDGVDELIHKW

AT4G29035.1 Plant self-incompatibility protein S1 family1.6e-2041.03Show/hide
Query:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSK-----DDNLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG
        V+P    W V V NGL+    L +HCKSK     D NL     F W F  N+  +TL+WC + K +  ++ + FW + I   L   C  K CVWTAK+DG
Subjt:  VIPPYQTWHVHVVNGLSNA-NLLVHCKSK-----DDNLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDG

Query:  IYLRNNPDGVDELIHKW
        +YL N+  G D L  KW
Subjt:  IYLRNNPDGVDELIHKW

AT5G04047.1 Plant self-incompatibility protein S1 family7.3e-1029.08Show/hide
Query:  MCVKMAFLLILTQPFAMAVIPPYQTWHVHVVNGL-SNANLLVHCKSKDDNLAMKQEF-----KWTFKTNIWQTTLYWCTL-QKPN--ADVSFEAFWIEKI
        +C    F + + Q  ++ +   ++ +++ + N L  N  L+++C+S     A K +F      WT K  ++  TL WC +   PN      F AF  ++ 
Subjt:  MCVKMAFLLILTQPFAMAVIPPYQTWHVHVVNGL-SNANLLVHCKSKDDNLAMKQEF-----KWTFKTNIWQTTLYWCTL-QKPN--ADVSFEAFWIEKI

Query:  HVWLECGCMGKR---CVWTAKDDGIYLRNNPDGVDELIHKW
         +   CG  G++   C W A++DGIY+RNN  G  +L++KW
Subjt:  HVWLECGCMGKR---CVWTAKDDGIYLRNNPDGVDELIHKW

AT5G04347.1 Plant self-incompatibility protein S1 family6.6e-1135.19Show/hide
Query:  VVNGLSNANLLVHCKSKDDNLA-----MKQEFKWTFKTNIWQTTLYWCTLQKP---NADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNPDG
        V N L+N  L V C+SKDDNL      + Q  K  F  N+W+ TL+WC L K       V+F+A+  +    W     +G R +W A++DGIY   +P+ 
Subjt:  VVNGLSNANLLVHCKSKDDNLA-----MKQEFKWTFKTNIWQTTLYWCTLQKP---NADVSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNPDG

Query:  VDELIHKW
          +  + W
Subjt:  VDELIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family1.6e-0935.92Show/hide
Query:  NGLSNANLL-VHCKSKDDNLA-----MKQEFKWTFKTNIWQTTLYWCTL-QKPNAD-----VSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNP
        N L ++ LL VHC+SKDD+L      + Q++++TF  NIWQTT + C + Q PN       V++E  W + +            C W  ++DGIY   + 
Subjt:  NGLSNANLL-VHCKSKDDNLA-----MKQEFKWTFKTNIWQTTLYWCTL-QKPNAD-----VSFEAFWIEKIHVWLECGCMGKRCVWTAKDDGIYLRNNP

Query:  DGV
        DGV
Subjt:  DGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGTGAAAATGGCTTTTTTGTTGATATTGACTCAACCATTTGCAATGGCAGTGATTCCACCTTACCAAACTTGGCATGTTCATGTGGTTAATGGGCTAAGCAATGC
CAATTTGTTGGTGCATTGCAAGTCCAAAGATGATAACCTTGCCATGAAACAAGAATTTAAATGGACTTTTAAGACCAACATTTGGCAAACTACTTTGTATTGGTGCACCC
TACAAAAGCCAAATGCTGACGTGTCGTTTGAAGCATTTTGGATTGAAAAGATACATGTTTGGCTTGAGTGTGGGTGTATGGGAAAAAGGTGTGTTTGGACGGCTAAAGAT
GATGGAATTTACCTACGAAATAATCCTGACGGTGTCGATGAGCTTATCCATAAGTGGGGCCACAAACTTTTTTTATTAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGTGAAAATGGCTTTTTTGTTGATATTGACTCAACCATTTGCAATGGCAGTGATTCCACCTTACCAAACTTGGCATGTTCATGTGGTTAATGGGCTAAGCAATGC
CAATTTGTTGGTGCATTGCAAGTCCAAAGATGATAACCTTGCCATGAAACAAGAATTTAAATGGACTTTTAAGACCAACATTTGGCAAACTACTTTGTATTGGTGCACCC
TACAAAAGCCAAATGCTGACGTGTCGTTTGAAGCATTTTGGATTGAAAAGATACATGTTTGGCTTGAGTGTGGGTGTATGGGAAAAAGGTGTGTTTGGACGGCTAAAGAT
GATGGAATTTACCTACGAAATAATCCTGACGGTGTCGATGAGCTTATCCATAAGTGGGGCCACAAACTTTTTTTATTAAGTTAA
Protein sequenceShow/hide protein sequence
MCVKMAFLLILTQPFAMAVIPPYQTWHVHVVNGLSNANLLVHCKSKDDNLAMKQEFKWTFKTNIWQTTLYWCTLQKPNADVSFEAFWIEKIHVWLECGCMGKRCVWTAKD
DGIYLRNNPDGVDELIHKWGHKLFLLS