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Sed0020609 (gene) of Chayote v1 genome

Gene IDSed0020609
OrganismSechium edule (Chayote v1)
DescriptionL10-interacting MYB domain-containing protein isoform X2
Genome locationLG07:43182686..43183105
RNA-Seq ExpressionSed0020609
SyntenySed0020609
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5937310.1 hypothetical protein HYC85_024816 [Camellia sinensis]2.9e-1052.56Show/hide
Query:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL
        MA  VS L     ++  SNSIS+   I A+Q LPD+DEEL+LDA DFL++   A  F+A+   LR+KWL+RKL PQPL
Subjt:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL

KAF8401399.1 hypothetical protein HHK36_012337 [Tetracentron sinense]4.9e-1060.32Show/hide
Query:  NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQ
        N+NTS  IS+   I AVQ +PD+DE+LLLDAFDFL++   A IF+A+   LR+KWLMRKL PQ
Subjt:  NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQ

THG04986.1 hypothetical protein TEA_018987 [Camellia sinensis var. sinensis]2.9e-1052.56Show/hide
Query:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL
        MA  VS L     ++  SNSIS+   I A+Q LPD+DEEL+LDA DFL++   A  F+A+   LR+KWL+RKL PQPL
Subjt:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL

XP_028089448.1 uncharacterized protein LOC114289833 isoform X1 [Camellia sinensis]2.9e-1052.56Show/hide
Query:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL
        MA  VS L     ++  SNSIS+   I A+Q LPD+DEEL+LDA DFL++   A  F+A+   LR+KWL+RKL PQPL
Subjt:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL

XP_028089450.1 uncharacterized protein LOC114289833 isoform X2 [Camellia sinensis]2.9e-1052.56Show/hide
Query:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL
        MA  VS L     ++  SNSIS+   I A+Q LPD+DEEL+LDA DFL++   A  F+A+   LR+KWL+RKL PQPL
Subjt:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL

TrEMBL top hitse value%identityAlignment
A0A4S4DRP1 Uncharacterized protein1.4e-1052.56Show/hide
Query:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL
        MA  VS L     ++  SNSIS+   I A+Q LPD+DEEL+LDA DFL++   A  F+A+   LR+KWL+RKL PQPL
Subjt:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL

A0A5D3BMH5 Polyubiquitin-like9.0e-1057.81Show/hide
Query:  NNTSNSISLGAAIGAVQELPDLDEELLLDAFDFL-DEGNNAVIFVAMQANLRRKWLMRKLCPQP
        +N+ NSI     I AV+ LPD+DE+L+LDAFDFL D  N A +F++M A LRRKWL++KL PQP
Subjt:  NNTSNSISLGAAIGAVQELPDLDEELLLDAFDFL-DEGNNAVIFVAMQANLRRKWLMRKLCPQP

A0A6J1DL46 ubiquitin-like isoform X19.0e-1036Show/hide
Query:  NNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRK------------------LC----------------------
        + +S SIS+GA I AVQ LPD+DE+L+LDA DF     N  IF+A+   LR++WL+R                   LC                      
Subjt:  NNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRK------------------LC----------------------

Query:  --PQPLTIFDGKQLEDGNTLGEYGI
           Q   I+ G+QLEDG TL EY I
Subjt:  --PQPLTIFDGKQLEDGNTLGEYGI

A0A6J1DN50 ubiquitin-like isoform X25.2e-1036.59Show/hide
Query:  NNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRK----------------LC------------------------
        + +S SIS+GA I AVQ LPD+DE+L+LDA DF     N  IF+A+   LR++WL+R                 LC                        
Subjt:  NNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRK----------------LC------------------------

Query:  PQPLTIFDGKQLEDGNTLGEYGI
         Q   I+ G+QLEDG TL EY I
Subjt:  PQPLTIFDGKQLEDGNTLGEYGI

A0A7J7G971 Uncharacterized protein1.4e-1052.56Show/hide
Query:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL
        MA  VS L     ++  SNSIS+   I A+Q LPD+DEEL+LDA DFL++   A  F+A+   LR+KWL+RKL PQPL
Subjt:  MANEVSFL-----NNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein1.0e-1054.72Show/hide
Query:  LGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCP
        +G A+ A+Q LPD+D+ELLLDA D L++   A  F+A+  +LRRKWL+RKL P
Subjt:  LGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCP

AT2G24960.2 unknown protein1.0e-1054.72Show/hide
Query:  LGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCP
        +G A+ A+Q LPD+D+ELLLDA D L++   A  F+A+  +LRRKWL+RKL P
Subjt:  LGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCP

AT4G02210.1 unknown protein6.8e-1045.76Show/hide
Query:  SNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQ
        + ++S+   + A+Q LPD+D+EL+LDA D L++   A  F+A+   LR+KWL+RKL PQ
Subjt:  SNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQ

AT4G02210.2 unknown protein6.8e-1045.76Show/hide
Query:  SNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQ
        + ++S+   + A+Q LPD+D+EL+LDA D L++   A  F+A+   LR+KWL+RKL PQ
Subjt:  SNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATGAGGTTTCTTTTTTGAACAATAATACCTCAAACTCCATCTCTCTCGGGGCTGCAATTGGGGCCGTGCAGGAATTACCCGACCTCGACGAAGAACTTCTTCT
CGACGCCTTTGATTTTCTCGACGAGGGAAACAATGCCGTAATCTTTGTTGCAATGCAAGCCAATTTACGAAGAAAGTGGCTGATGAGAAAACTTTGTCCACAACCGTTGA
CGATTTTCGATGGAAAGCAGCTTGAAGATGGCAACACTTTAGGAGAGTATGGCATCTTGGTTGACTATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATGAGGTTTCTTTTTTGAACAATAATACCTCAAACTCCATCTCTCTCGGGGCTGCAATTGGGGCCGTGCAGGAATTACCCGACCTCGACGAAGAACTTCTTCT
CGACGCCTTTGATTTTCTCGACGAGGGAAACAATGCCGTAATCTTTGTTGCAATGCAAGCCAATTTACGAAGAAAGTGGCTGATGAGAAAACTTTGTCCACAACCGTTGA
CGATTTTCGATGGAAAGCAGCTTGAAGATGGCAACACTTTAGGAGAGTATGGCATCTTGGTTGACTATTATTGA
Protein sequenceShow/hide protein sequence
MANEVSFLNNNTSNSISLGAAIGAVQELPDLDEELLLDAFDFLDEGNNAVIFVAMQANLRRKWLMRKLCPQPLTIFDGKQLEDGNTLGEYGILVDYY