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Sed0020621 (gene) of Chayote v1 genome

Gene IDSed0020621
OrganismSechium edule (Chayote v1)
DescriptionProtein TIC 214
Genome locationLG13:18571725..18572424
RNA-Seq ExpressionSed0020621
SyntenySed0020621
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7012819.1 unnamed protein product [Microthlaspi erraticum]5.8e-3564.29Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+R LVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

CAA7014164.1 unnamed protein product [Microthlaspi erraticum]5.3e-3665Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

KAG1362574.1 hypothetical protein COCNU_10G007930 [Cocos nucifera]1.2e-2796.92Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
        MEGQRPLVS PVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSI NLVVKLYCGDDTVGE
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE

PQP98134.1 hypothetical protein Pyn_20557 [Prunus yedoensis var. nudiflora]4.0e-2896.92Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
        MEG+RPLVSPPVKN+GLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE

TYK00176.1 hypothetical protein E5676_scaffold1452G00010 [Cucumis melo var. makuwa]1.4e-2886.67Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG
        MEGQR LVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC DDTVGE     ++ SG
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG

TrEMBL top hitse value%identityAlignment
A0A314XT24 Uncharacterized protein2.0e-2896.92Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
        MEG+RPLVSPPVKN+GLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE

A0A5D3BPI7 Uncharacterized protein6.7e-2986.67Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG
        MEGQR LVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYC DDTVGE     ++ SG
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSG

A0A6D2HAQ3 Uncharacterized protein2.8e-3564.29Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+R LVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

A0A6D2K9K4 Uncharacterized protein2.5e-3665Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------
        MEG+RPLVS PVKNW LTITSQYAFL+CLSSFMVRYSGVLGVEE HQSIPNLVVKLYCGDDTVGE T   T+   GV +           PR        
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTV-SGVRI----------PPR--------

Query:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK
           +P ++G  FP GGRKIM+G  IAD KLWNLG+GLLSK
Subjt:  --PQPAKKGRTFPSGGRKIMIG--IADPKLWNLGVGLLSK

A0A6N2NAY5 Uncharacterized protein1.1e-2896.92Show/hide
Query:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE
        MEGQRPLVSP VKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCG+DTVGE
Subjt:  MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGAGCACGTGGCTACGAACCACGGTGT
CGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTG
GGTGTGGGTCTTTTGTCGAAATGGAATGGCCTTATCTTTTTATTTTTTCTTTTTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAGTCAAGAATTGGGGCCTCACAATCACTAGCCAATATGCTTTTCTCTCATGCCTTTCTTCGTTCATGGTTCGATATTC
TGGTGTCCTAGGCGTAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTGCGGTGACGATACTGTAGGGGAGAGCACGTGGCTACGAACCACGGTGT
CGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCAAAAAGGGAAGGACTTTTCCCTCTGGGGGTAGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTG
GGTGTGGGTCTTTTGTCGAAATGGAATGGCCTTATCTTTTTATTTTTTCTTTTTCGTTAA
Protein sequenceShow/hide protein sequence
MEGQRPLVSPPVKNWGLTITSQYAFLSCLSSFMVRYSGVLGVEEPHQSIPNLVVKLYCGDDTVGESTWLRTTVSGVRIPPRPQPAKKGRTFPSGGRKIMIGIADPKLWNL
GVGLLSKWNGLIFLFFLFR