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Sed0020623 (gene) of Chayote v1 genome

Gene IDSed0020623
OrganismSechium edule (Chayote v1)
DescriptionPLATZ transcription factor family protein
Genome locationLG04:28785549..28792684
RNA-Seq ExpressionSed0020623
SyntenySed0020623
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006734 - PLATZ transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951161.1 uncharacterized protein LOC111454064 isoform X1 [Cucurbita moschata]1.5e-6789.05Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK

XP_022951281.1 uncharacterized protein LOC111454064 isoform X2 [Cucurbita moschata]1.3e-6883.78Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK        +ED
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED

XP_023005195.1 uncharacterized protein LOC111498296 isoform X2 [Cucurbita maxima]1.0e-6883.78Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK        +ED
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED

XP_038903534.1 uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida]3.0e-6891.24Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  VMS APPWLEPLL TPFF+ICHTHGDAARSERNMYCLDCH DAFCFYCR S H DHQVIQIRRSSYHDVVRVAEIE+ALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK

XP_038903535.1 uncharacterized protein LOC120090101 isoform X2 [Benincasa hispida]3.0e-6891.24Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  VMS APPWLEPLL TPFF+ICHTHGDAARSERNMYCLDCH DAFCFYCR S H DHQVIQIRRSSYHDVVRVAEIE+ALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK

TrEMBL top hitse value%identityAlignment
A0A6J1F9G7 uncharacterized protein At3g50808-like1.2e-6790.51Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  VMS APPWLEPLL TPFF+ICHTH  AARSERNMYCLDCH DAFCFYCR S HKDHQVIQIRRSSYHDVVRVAEIE+ALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK

A0A6J1GGT0 uncharacterized protein LOC111454064 isoform X17.1e-6889.05Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK

A0A6J1GH51 uncharacterized protein LOC111454064 isoform X26.4e-6983.78Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK        +ED
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED

A0A6J1KWS6 uncharacterized protein LOC111498296 isoform X24.9e-6983.78Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK        +ED
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMED

A0A6J1KYH1 uncharacterized protein LOC111498296 isoform X17.1e-6889.05Show/hide
Query:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM
        MKQ  +  +APPWLEPLLNT FF+ICHTHG++ARSERNMYCLDCHCDAFCFYCR S HKDHQVIQIRRSSYHDVVRVA+IEEALDISGVQTYVINSARVM
Subjt:  MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK
        FLNERPQPKAGKGGA++CEICGRSLLDPFRFCSLGCK
Subjt:  FLNERPQPKAGKGGAYVCEICGRSLLDPFRFCSLGCK

SwissProt top hitse value%identityAlignment
Q1G3Q4 Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 11.4e-2845.38Show/hide
Query:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA
        P WL+ L    FF  C  H  A ++ERN+ CLDC C + C +C  S H+ H+++Q+RR  YHDVVR+ ++++ +D S VQ Y INSA+V+F+ +RPQ + 
Subjt:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGAYVCEICGRSLLDPFRFCSLGCKAHY
         KG    C  C RSL +P+  CSLGCK  +
Subjt:  GKGGAYVCEICGRSLLDPFRFCSLGCKAHY

Arabidopsis top hitse value%identityAlignment
AT1G21000.1 PLATZ transcription factor family protein9.2e-4461.72Show/hide
Query:  APPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPK
        +PPWL P+L   +F  C  H D+ ++E N++CLDC  +AFC YC   +HKDH+V+QIRRSSYH+VVRV EI++ +DI+ VQTY+INSA+++FLNERPQP+
Subjt:  APPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPK

Query:  AGKGGAYVCEICGRSLLDPFRFCSLGCK
         GKG    CEIC RSLLD FRFCSLGCK
Subjt:  AGKGGAYVCEICGRSLLDPFRFCSLGCK

AT1G21000.2 PLATZ transcription factor family protein9.2e-4461.72Show/hide
Query:  APPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPK
        +PPWL P+L   +F  C  H D+ ++E N++CLDC  +AFC YC   +HKDH+V+QIRRSSYH+VVRV EI++ +DI+ VQTY+INSA+++FLNERPQP+
Subjt:  APPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPK

Query:  AGKGGAYVCEICGRSLLDPFRFCSLGCK
         GKG    CEIC RSLLD FRFCSLGCK
Subjt:  AGKGGAYVCEICGRSLLDPFRFCSLGCK

AT1G32700.1 PLATZ transcription factor family protein3.2e-4465.35Show/hide
Query:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA
        P WL+PLL   FF  C  H D+ +SE NMYCLDC     C  C  S HKDH  IQIRRSSYHDV+RV+EI++ LDI+GVQTYVINSA+V+FLNERPQP+ 
Subjt:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGAYVCEICGRSLLDPFRFCSLGCK
        GKG    CE+C RSL+D FRFCSLGCK
Subjt:  GKGGAYVCEICGRSLLDPFRFCSLGCK

AT1G76590.1 PLATZ transcription factor family protein1.2e-4362.99Show/hide
Query:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA
        PPWL P+L   +F  C  H  + +SE NM+CLDC  +AFC YC    H++H+V+QIRRSSYH+VVRV EI++ +DIS VQTY+INSAR++FLNERPQP+ 
Subjt:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGAYVCEICGRSLLDPFRFCSLGCK
        GKG    CEIC RSLLD FRFCSLGCK
Subjt:  GKGGAYVCEICGRSLLDPFRFCSLGCK

AT2G27930.1 PLATZ transcription factor family protein6.2e-4867.65Show/hide
Query:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA
        P WLE LL T FF+IC  H +  R+E NM+CL C   AFCFYCR S H DH V+QIRRSSYHDVVRV+EIE ALDI GVQTYVINSARV+FLNERPQPK 
Subjt:  PPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGA---------YVCEICGRSLLDPFRFCSLGCK
           GA         Y CE C R+LLDPFRFCSLGCK
Subjt:  GKGGA---------YVCEICGRSLLDPFRFCSLGCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAAATCCAGTAATGTCGGCGGCGCCGCCGTGGCTGGAGCCGTTACTGAACACGCCGTTCTTCACAATCTGCCACACGCACGGCGACGCCGCCAGGAGTGAACG
GAATATGTACTGTCTCGATTGCCATTGCGACGCATTTTGCTTCTACTGCCGCGAATCTCAGCACAAGGATCATCAAGTAATTCAGATAAGGAGATCTTCGTATCATGATG
TGGTGAGAGTTGCAGAAATTGAAGAGGCTTTGGATATAAGTGGAGTACAAACTTATGTGATTAATAGTGCAAGAGTTATGTTTTTGAATGAGAGGCCTCAGCCAAAAGCT
GGAAAAGGAGGAGCTTATGTTTGTGAAATTTGTGGAAGAAGCTTATTGGATCCTTTTCGTTTCTGTTCACTTGGTTGTAAGGCTCATTATCCACGAAGCATTATTATGGA
GGATTGTCATCCTCGTTTTGACTTTTATCACTTGGGATTTGCACAGTACCACTATTGGAACTTTCTCTCTTTTCTCCCACAACTTCTTCTCATTTATCAGCTTCTGGAAT
TGCTGGATTGGCAAACCTCTCCCATGCATCTTCCTGTTGCTGATATTGCATCCTCTGCTCTATGTCTTCTACTATGTGCCTTAAAACAATGA
mRNA sequenceShow/hide mRNA sequence
GCTGGAATCATTCCTCAGCCACCAAATCCATCTCCACCGTCCATATTCTCCTCATTAACCTTCTCCTTTCAGTTTCGTTTCAATTCTCACGATTTCGCATCTCTCACTTC
TCTCGTGAAAGAAAAAAAAACAAACAAATTATGGCAATAAGGAAAAAGCTCACATTTTTTCCAATACCCAATTCCATTTTCCCACATTGAGAGAATAAATATTTTGATGA
AGCAAAATCCAGTAATGTCGGCGGCGCCGCCGTGGCTGGAGCCGTTACTGAACACGCCGTTCTTCACAATCTGCCACACGCACGGCGACGCCGCCAGGAGTGAACGGAAT
ATGTACTGTCTCGATTGCCATTGCGACGCATTTTGCTTCTACTGCCGCGAATCTCAGCACAAGGATCATCAAGTAATTCAGATAAGGAGATCTTCGTATCATGATGTGGT
GAGAGTTGCAGAAATTGAAGAGGCTTTGGATATAAGTGGAGTACAAACTTATGTGATTAATAGTGCAAGAGTTATGTTTTTGAATGAGAGGCCTCAGCCAAAAGCTGGAA
AAGGAGGAGCTTATGTTTGTGAAATTTGTGGAAGAAGCTTATTGGATCCTTTTCGTTTCTGTTCACTTGGTTGTAAGGCTCATTATCCACGAAGCATTATTATGGAGGAT
TGTCATCCTCGTTTTGACTTTTATCACTTGGGATTTGCACAGTACCACTATTGGAACTTTCTCTCTTTTCTCCCACAACTTCTTCTCATTTATCAGCTTCTGGAATTGCT
GGATTGGCAAACCTCTCCCATGCATCTTCCTGTTGCTGATATTGCATCCTCTGCTCTATGTCTTCTACTATGTGCCTTAAAACAATGACCTATTCATCTCTCTTTATGAT
GGCTAGCATGAGATCTTGCCATGGGGGTTATAGCTCATAGTTGATTTCATCTGCTATTGTCCCTTTAAGTACTTTGACCCTTAAAAATGTAATGTCTTGTTCTGTAACTT
CTTTTTTGTCTACGCTTTCTCTGAGTGTTTCTTCCAGAGAGGGTTCTAACTCTCATTATGGTTATTGAGTGAGGTGCTAGAATGATATCATTTTCTATTATCCAAGCTTG
GC
Protein sequenceShow/hide protein sequence
MKQNPVMSAAPPWLEPLLNTPFFTICHTHGDAARSERNMYCLDCHCDAFCFYCRESQHKDHQVIQIRRSSYHDVVRVAEIEEALDISGVQTYVINSARVMFLNERPQPKA
GKGGAYVCEICGRSLLDPFRFCSLGCKAHYPRSIIMEDCHPRFDFYHLGFAQYHYWNFLSFLPQLLLIYQLLELLDWQTSPMHLPVADIASSALCLLLCALKQ