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Sed0020625 (gene) of Chayote v1 genome

Gene IDSed0020625
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:29756445..29760512
RNA-Seq ExpressionSed0020625
SyntenySed0020625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A2N9IJT2 Uncharacterized protein3.3e-0428.96Show/hide
Query:  FSITVNYGGKFAKGRDIYVGGLKSSFEKIDPNLWYLFELFDFVKSLGFSEWENLLY-----ESEDGCFKEIDSDNDAMNLACLAIQNENASINVYVEHVE
        FS+ V +GG F      Y GG+K+ F+K DP  W   E+   V+ LG++    L +       EDG  ++I+SD   M      +      I V+VEH+ 
Subjt:  FSITVNYGGKFAKGRDIYVGGLKSSFEKIDPNLWYLFELFDFVKSLGFSEWENLLY-----ESEDGCFKEIDSDNDAMNLACLAIQNENASINVYVEHVE

Query:  NENSLHEDDEIELDQTSDEENNVKDIHFFYSEDDLLDELEYMNDKSKHNELRCQNKDGELDVEEDDACNFDLDKFSNPNSQDD
         E  ++ D E   D   D   NV D H  + E+D + +++  +D          ++  + +    DA N D D     NS DD
Subjt:  NENSLHEDDEIELDQTSDEENNVKDIHFFYSEDDLLDELEYMNDKSKHNELRCQNKDGELDVEEDDACNFDLDKFSNPNSQDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAATTTAGTATAACTGTTAACTATGGTGGTAAGTTTGCAAAAGGTCGAGACATATATGTAGGGGGCCTGAAATCGTCGTTTGAGAAAATTGATCCTAACTTATG
GTATTTGTTTGAATTGTTTGATTTTGTTAAGTCTTTAGGCTTTAGCGAATGGGAAAATTTGTTGTATGAAAGTGAGGATGGTTGCTTTAAGGAAATAGATTCAGACAATG
ATGCGATGAATTTAGCTTGTTTAGCTATACAAAATGAAAATGCGTCTATAAATGTATACGTAGAACACGTAGAAAATGAGAATAGTTTACATGAGGATGATGAAATTGAA
CTTGATCAAACTTCTGATGAAGAAAATAATGTGAAGGATATTCATTTTTTTTATAGTGAGGATGACTTACTTGATGAGTTAGAATATATGAATGATAAAAGTAAACATAA
CGAACTTCGTTGTCAAAACAAAGATGGTGAACTTGATGTCGAAGAAGATGACGCATGCAATTTTGATTTAGATAAATTTTCTAACCCGAATTCACAGGATGACTGTAAGG
AGGAGCTGTCCACAACGAAAGATGAGGCTTTTCGAATTTTGTTTAGGCTTAAGCGAATGTTGGATTCTCTTAAAGTAGAGGTGATCTTTAGTGTTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAATTTAGTATAACTGTTAACTATGGTGGTAAGTTTGCAAAAGGTCGAGACATATATGTAGGGGGCCTGAAATCGTCGTTTGAGAAAATTGATCCTAACTTATG
GTATTTGTTTGAATTGTTTGATTTTGTTAAGTCTTTAGGCTTTAGCGAATGGGAAAATTTGTTGTATGAAAGTGAGGATGGTTGCTTTAAGGAAATAGATTCAGACAATG
ATGCGATGAATTTAGCTTGTTTAGCTATACAAAATGAAAATGCGTCTATAAATGTATACGTAGAACACGTAGAAAATGAGAATAGTTTACATGAGGATGATGAAATTGAA
CTTGATCAAACTTCTGATGAAGAAAATAATGTGAAGGATATTCATTTTTTTTATAGTGAGGATGACTTACTTGATGAGTTAGAATATATGAATGATAAAAGTAAACATAA
CGAACTTCGTTGTCAAAACAAAGATGGTGAACTTGATGTCGAAGAAGATGACGCATGCAATTTTGATTTAGATAAATTTTCTAACCCGAATTCACAGGATGACTGTAAGG
AGGAGCTGTCCACAACGAAAGATGAGGCTTTTCGAATTTTGTTTAGGCTTAAGCGAATGTTGGATTCTCTTAAAGTAGAGGTGATCTTTAGTGTTGCATGA
Protein sequenceShow/hide protein sequence
MTEFSITVNYGGKFAKGRDIYVGGLKSSFEKIDPNLWYLFELFDFVKSLGFSEWENLLYESEDGCFKEIDSDNDAMNLACLAIQNENASINVYVEHVENENSLHEDDEIE
LDQTSDEENNVKDIHFFYSEDDLLDELEYMNDKSKHNELRCQNKDGELDVEEDDACNFDLDKFSNPNSQDDCKEELSTTKDEAFRILFRLKRMLDSLKVEVIFSVA