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Sed0020633 (gene) of Chayote v1 genome

Gene IDSed0020633
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein-like
Genome locationLG05:35564272..35565431
RNA-Seq ExpressionSed0020633
SyntenySed0020633
Gene Ontology termsGO:0009415 - response to water (biological process)
InterPro domainsIPR000167 - Dehydrin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572053.1 Embryogenic cell protein 40, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2551.9Show/hide
Query:  MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA--------------------------EDGGHG------
        M KMADIQDEYGNPI+LTDEHGNPVVLTDE+GNP+RL+G+AT+VGTTLGSLI G    DGG                           EDGG G      
Subjt:  MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA--------------------------EDGGHG------

Query:  -CVSDPKVDSENE-----EKGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT
           S P  + ++E     +KGLT+KI EKLTGGK +EEQ   SS   T AT TA+P T
Subjt:  -CVSDPKVDSENE-----EKGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT

KAG7011719.1 Embryogenic cell protein 40 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2551.23Show/hide
Query:  MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA----------------------------EDGGHG----
        M KMADIQDEYGNPI+LTDEHGNPVVLTDE+GNP+RL+G+AT+VGTTLGSLI G    DGG                             EDGG G    
Subjt:  MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA----------------------------EDGGHG----

Query:  ---CVSDPKVDSENEE-------KGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT
             S P  + E  E       KGLT+KI EKLTGGK +EEQ   SS   T AT TA+P T
Subjt:  ---CVSDPKVDSENEE-------KGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT

XP_022953104.1 late embryogenesis abundant protein-like [Cucurbita moschata]3.6e-2149.04Show/hide
Query:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA----------------------------EDGGHG-------CVSD
        QDEYGNPI+L DEHGNPVVLTDE+GNP+RL+GIAT+VGTTLGSLI G    DGG                             EDGG G         S 
Subjt:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA----------------------------EDGGHG-------CVSD

Query:  PKVDSENEE---------KGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT
        P  + E  E         KGL +KI EKLTGGK +EEQ   SS   T AT TASP T
Subjt:  PKVDSENEE---------KGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT

XP_023511710.1 late embryogenesis abundant protein-like isoform X1 [Cucurbita pepo subsp. pepo]5.5e-2248.08Show/hide
Query:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDS------------------------------
        QDEYGNPI+LTDEHGNPVVLTDE+GNP+RL+G+AT+VGTTLGSLI G     GG + G HG  SD K  S                              
Subjt:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDS------------------------------

Query:  -------------ENEEKGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT
                     + ++KGLT+KI EKLTGGK KEEQ+  SS   T AT T SP T
Subjt:  -------------ENEEKGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT

XP_038887694.1 late embryogenesis abundant protein-like isoform X1 [Benincasa hispida]1.0e-2347.1Show/hide
Query:  MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDS-----------------------
        M KMADI+DE+GNPI LTDE GNPV+LTDE+GNPM LTG+AT+VGTTLGSL+ GG    GG+ DGGHGC SD +  S                       
Subjt:  MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDS-----------------------

Query:  -----------------------ENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMT
                               + ++KGLT+KI EKL GGK KEEQ + S L T
Subjt:  -----------------------ENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMT

TrEMBL top hitse value%identityAlignment
A0A5N6QN38 Uncharacterized protein1.2e-1743.54Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGI-------------------ATRVGTTLGSLIH------------GGELSDGGAEDGGHGCVSD
        MA+I+DEYGNPI+LTDEHGNPV LTDEYGNPM LTG+                   AT+     G+  H                S G +ED G G   +
Subjt:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGI-------------------ATRVGTTLGSLIH------------GGELSDGGAEDGGHGCVSD

Query:  PKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASPTT
         +  +  ++KGL +KI EKLTGGK KEE AH +++ T  T TAS T+
Subjt:  PKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASPTT

A0A6A6NDG2 Uncharacterized protein3.4e-1750.91Show/hide
Query:  KMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQA
        KMAD++DE+GNPI+LTDEHGNPV LTDE+GNP+ +TG+AT    TLG+ +         +ED G G           ++KGL +KI EKLTGGK KEE  
Subjt:  KMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQA

Query:  HGSSLMTMAT
        H  S  T  T
Subjt:  HGSSLMTMAT

A0A6J1C1Y9 late embryogenesis abundant protein-like7.3e-2045.35Show/hide
Query:  EKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLI-----------HG-GE---LSDGGAEDGGH---GCVSDPKVDSENEE--
        EKMADI+DE+GNPIELTDE GNPVVLTDE+GNPMRLTG+AT++G TLGSL+           HG GE   L   G +DGG            D E E+  
Subjt:  EKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLI-----------HG-GE---LSDGGAEDGGH---GCVSDPKVDSENEE--

Query:  -------------------------------KGLTKKIIEKLTGGKAKEEQAH-GSSLMTMATKTASPTTMD
                                       KG T+KI EKLTG + KEEQ H      T AT+TA+PT+MD
Subjt:  -------------------------------KGLTKKIIEKLTGGKAKEEQAH-GSSLMTMATKTASPTTMD

A0A6J1GNP3 late embryogenesis abundant protein-like1.7e-2149.04Show/hide
Query:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA----------------------------EDGGHG-------CVSD
        QDEYGNPI+L DEHGNPVVLTDE+GNP+RL+GIAT+VGTTLGSLI G    DGG                             EDGG G         S 
Subjt:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGA----------------------------EDGGHG-------CVSD

Query:  PKVDSENEE---------KGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT
        P  + E  E         KGL +KI EKLTGGK +EEQ   SS   T AT TASP T
Subjt:  PKVDSENEE---------KGLTKKIIEKLTGGKAKEEQAHGSS-LMTMATKTASPTT

A0A6J1IJR5 late embryogenesis abundant protein-like2.1e-1948.94Show/hide
Query:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDS---------------ENEE-----------
        QDEYGNPI+ TDEHGNPVVLTDE+GNP+R  G+AT+VGTTLGSLI G     GG + GGHG  SD K  S               ENE+           
Subjt:  QDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDS---------------ENEE-----------

Query:  -----------------KGLTKKIIEKLTGGKAKEEQAHGS
                         KGLT+KI EKLTGGK KEEQ   S
Subjt:  -----------------KGLTKKIIEKLTGGKAKEEQAHGS

SwissProt top hitse value%identityAlignment
P09442 Late embryogenesis abundant protein D-115.4e-0435.4Show/hide
Query:  MADIQDEYGNP-IELTDEHGNPVVLTDEYGNPM--RLTGIATRVGTTLGSLIHGGELSDGGAEDGGH------GCVSDPKVDSENE-----EKGLTKKII
        MA  Q++Y  P +  TD +GNP   TDEYGNP+  + TG               G L  GG   GGH      G  S     SE+E     +KGL +++ 
Subjt:  MADIQDEYGNP-IELTDEHGNPVVLTDEYGNPM--RLTGIATRVGTTLGSLIHGGELSDGGAEDGGH------GCVSDPKVDSENE-----EKGLTKKII

Query:  EKLTGGKAKEEQA
        EK+ G K  + QA
Subjt:  EKLTGGKAKEEQA

P21298 Late embryogenesis abundant protein6.6e-1031.76Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIA----------------------------------------TRVGTTLGSLIHG---------
        MAD++DE GNPI LTD +GNPV L+DE+GNPM +TG+A                                        T   TT G   HG         
Subjt:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIA----------------------------------------TRVGTTLGSLIHG---------

Query:  GELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASPTTMDMDR
        G  S   +ED G G            +K +  KI +KL GGK K+EQ   ++  T  T T + T    D+
Subjt:  GELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASPTTMDMDR

P28639 Dehydrin DHN15.4e-0441.54Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHG
        M+  Q++YG    +TDE+GNPV   D+YGNP+   G     G       H G  + GGA D GHG
Subjt:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHG

Q07322 Embryogenic cell protein 402.2e-1359.42Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHG-GELSDGGAEDGGHGCVS
        MAD++DE GNPI+LTD+HGNPV LTDEYGNP+ +TG+AT  G T G   HG G  S GG    G G V+
Subjt:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHG-GELSDGGAEDGGHGCVS

Q96261 Probable dehydrin LEA1.4e-0731.58Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVV-LTDEYGNPMRLTGI----------------------------------------ATRVG-------TTLGSLIHG-
        MAD++DE GNPI LTD  GNP+V LTDE+GNPM LTG+                                        AT  G       TT G   HG 
Subjt:  MADIQDEYGNPIELTDEHGNPVV-LTDEYGNPMRLTGI----------------------------------------ATRVG-------TTLGSLIHG-

Query:  --------GELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASP
                G  S   +ED G G            +K + +KI EK   GK K+EQ   ++  T    T  P
Subjt:  --------GELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASP

Arabidopsis top hitse value%identityAlignment
AT2G21490.1 dehydrin LEA9.7e-0931.58Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVV-LTDEYGNPMRLTGI----------------------------------------ATRVG-------TTLGSLIHG-
        MAD++DE GNPI LTD  GNP+V LTDE+GNPM LTG+                                        AT  G       TT G   HG 
Subjt:  MADIQDEYGNPIELTDEHGNPVV-LTDEYGNPMRLTGI----------------------------------------ATRVG-------TTLGSLIHG-

Query:  --------GELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASP
                G  S   +ED G G            +K + +KI EK   GK K+EQ   ++  T    T  P
Subjt:  --------GELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTMATKTASP

AT4G39130.1 Dehydrin family protein1.5e-0965.85Show/hide
Query:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRV
        MAD++DE GNPI LTD HG P  L DE+GN M LTG+AT V
Subjt:  MADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAATGGCTGATATTCAGGATGAGTATGGCAACCCCATCGAGCTGACCGACGAGCATGGCAACCCCGTTGTGTTGACTGATGAATATGGCAACCCCATGCGGCT
CACCGGCATTGCAACGAGGGTCGGGACAACACTCGGGTCACTGATACACGGCGGCGAACTGAGTGATGGTGGTGCTGAAGATGGTGGCCACGGCTGTGTTTCTGATCCTA
AAGTTGATTCCGAGAATGAAGAAAAAGGACTCACTAAAAAAATAATAGAGAAATTAACCGGAGGAAAGGCTAAAGAAGAACAAGCTCATGGTTCTTCCCTAATGACTATG
GCTACCAAAACTGCATCCCCAACTACCATGGACATGGACCGAGCTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAATGGCTGATATTCAGGATGAGTATGGCAACCCCATCGAGCTGACCGACGAGCATGGCAACCCCGTTGTGTTGACTGATGAATATGGCAACCCCATGCGGCT
CACCGGCATTGCAACGAGGGTCGGGACAACACTCGGGTCACTGATACACGGCGGCGAACTGAGTGATGGTGGTGCTGAAGATGGTGGCCACGGCTGTGTTTCTGATCCTA
AAGTTGATTCCGAGAATGAAGAAAAAGGACTCACTAAAAAAATAATAGAGAAATTAACCGGAGGAAAGGCTAAAGAAGAACAAGCTCATGGTTCTTCCCTAATGACTATG
GCTACCAAAACTGCATCCCCAACTACCATGGACATGGACCGAGCTCGTTAA
Protein sequenceShow/hide protein sequence
MEKMADIQDEYGNPIELTDEHGNPVVLTDEYGNPMRLTGIATRVGTTLGSLIHGGELSDGGAEDGGHGCVSDPKVDSENEEKGLTKKIIEKLTGGKAKEEQAHGSSLMTM
ATKTASPTTMDMDRAR