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Sed0020654 (gene) of Chayote v1 genome

Gene IDSed0020654
OrganismSechium edule (Chayote v1)
DescriptionGlycine-rich protein family
Genome locationLG04:47790779..47792889
RNA-Seq ExpressionSed0020654
SyntenySed0020654
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653344.1 hypothetical protein Csa_007318 [Cucumis sativus]8.3e-4481.31Show/hide
Query:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQG
        VVE FKCFDNKFIYNGCE AYRLNPSGSFNVP EATN+FCNGPCLIETQL+LNCL+  F+NFLFYNKAT Q+ +NALRVGCSYSSQRG  NFN+GLFMQG
Subjt:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQG

Query:  EFSRSQS
        EFS + +
Subjt:  EFSRSQS

XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]2.3e-4973.94Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVA-EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFY
        MASP SFL  +  LALV SL  PSV   +EI GQ VVE+FKCFDNKFIYNGCESAYRLNPSGSFNVP EATN+FCNGPCLIETQL+LNCL+ +F NFLFY
Subjt:  MASPFSFLLAILALALVPSLYYPSVVA-EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFY

Query:  NKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        NKAT Q+ +NALR+GCS+SSQRG  NFN+GLFMQGE S++ +
Subjt:  NKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]6.8e-4671.63Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN
        MA P +FL  +LALA+  SL  PSV AEEI GQ V EA +CFDNKFIYNGC+S YRLNPSGSFNVP EATN+FC+GPCL+ET+LVL+CL+ AF NFLFYN
Subjt:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN

Query:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        KA  QN +NALR GCSYSSQRG  NFN GLFMQGE S++ S
Subjt:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

XP_023529219.1 uncharacterized protein LOC111792117 [Cucurbita pepo subsp. pepo]8.3e-4465.96Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN
        MASP   LL +       +LY  SV  EE++GQ V +AF+CFDN  IYNGCESAYRLNP+G+ NVP EATN+FCNGPCLIETQL+LNCL+ AF NFLFYN
Subjt:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN

Query:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        KATV   QNALR GCSYS+QRG  NFN G FMQGE S+  +
Subjt:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]3.0e-4974.13Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVA--EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLF
        MASP SFL   LALA++  L  PSV +  +EI GQ VVE FKCFDNKFIYNGCE AYRLNPSGSFNVP EATN+FCNGPCLIETQL+LNCL+  F+NFLF
Subjt:  MASPFSFLLAILALALVPSLYYPSVVA--EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLF

Query:  YNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        YNKAT Q+ +NALRVGCSYSSQRG  NFN+GLFMQGEFS + +
Subjt:  YNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein4.6e-4871.33Show/hide
Query:  MASPFSFLLAILALALVPSLYYPS----VVAE-----EIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNG
        MASP SFL   LALA++  L  PS    V+ E     EI GQ VVE FKCFDNKFIYNGCE AYRLNPSGSFNVP EATN+FCNGPCLIETQL+LNCL+ 
Subjt:  MASPFSFLLAILALALVPSLYYPS----VVAE-----EIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNG

Query:  AFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
         F+NFLFYNKAT Q+ +NALRVGCSYSSQRG  NFN+GLFMQGEFS + +
Subjt:  AFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

A0A1S3BPH6 uncharacterized protein LOC1034921171.1e-4973.94Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVA-EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFY
        MASP SFL  +  LALV SL  PSV   +EI GQ VVE+FKCFDNKFIYNGCESAYRLNPSGSFNVP EATN+FCNGPCLIETQL+LNCL+ +F NFLFY
Subjt:  MASPFSFLLAILALALVPSLYYPSVVA-EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFY

Query:  NKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        NKAT Q+ +NALR+GCS+SSQRG  NFN+GLFMQGE S++ +
Subjt:  NKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

A0A5A7U972 Uncharacterized protein5.3e-4476.42Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVA-EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFY
        MASP SFL  +  LALV SL  PSV   +EI GQ VVE+FKCFDNKFIYNGCESAYRLNPSGSFNVP EATN+FCNGPCLIETQL+LNCL+ +F NFLFY
Subjt:  MASPFSFLLAILALALVPSLYYPSVVA-EEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFY

Query:  NKATVQNFQNALRVGCSYSSQRG
        NKAT Q+ +NALR+GCS+SSQRG
Subjt:  NKATVQNFQNALRVGCSYSSQRG

A0A6J1E0J9 uncharacterized protein LOC1110252893.3e-4671.63Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN
        MA P +FL  +LALA+  SL  PSV AEEI GQ V EA +CFDNKFIYNGC+S YRLNPSGSFNVP EATN+FC+GPCL+ET+LVL+CL+ AF NFLFYN
Subjt:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN

Query:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        KA  QN +NALR GCSYSSQRG  NFN GLFMQGE S++ S
Subjt:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

A0A6J1JMH7 uncharacterized protein LOC1114865296.9e-4466.67Show/hide
Query:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN
        MASP   LL +   AL  +LY  SV  EE +GQ V + F+CFDN  IYNGCESAYRLNPSG+ NVP +ATN+FCNGPCLIETQL+LNCL+ AF+NFLFYN
Subjt:  MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYN

Query:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS
        KATV   QNALR GCSYS+QRG  NFN G FMQGE S+  +
Subjt:  KATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQGEFSRSQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)2.4e-2553Show/hide
Query:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQG
        V  A  CF+N  +Y GC  A+RLN  G F VP E T+ FCNGPC  ET+LVL C+N    +F+FYN+AT ++ +NALR GCS S  RG  NFN G + QG
Subjt:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNEGLFMQG

AT5G49350.1 Glycine-rich protein family2.6e-1939.36Show/hide
Query:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNE
        V +A +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC+     ++ F+N+AT+ + +  L+ GCSY  +RG++N  E
Subjt:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNE

AT5G49350.2 Glycine-rich protein family2.6e-1939.36Show/hide
Query:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNE
        V +A +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC+     ++ F+N+AT+ + +  L+ GCSY  +RG++N  E
Subjt:  VVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNALRVGCSYSSQRGIWNFNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCATTTAGCTTCCTCCTCGCCATTCTCGCTCTCGCTCTCGTCCCCTCGCTCTACTATCCCTCAGTTGTTGCTGAGGAGATTCAAGGACAAGAGGTGGTTGA
AGCCTTCAAATGTTTTGACAATAAGTTTATATACAATGGGTGTGAAAGTGCTTACAGGCTAAACCCAAGTGGGAGTTTCAATGTCCCTCGTGAGGCTACTAATATGTTTT
GCAATGGACCGTGCTTGATTGAAACACAACTTGTGCTCAATTGCCTTAACGGTGCATTCGAAAACTTCTTGTTTTACAACAAAGCCACAGTGCAAAACTTCCAAAATGCC
CTTCGTGTTGGCTGCAGTTACTCAAGCCAAAGAGGTATATGGAACTTCAATGAAGGATTGTTTATGCAAGGAGAATTCAGCAGAAGCCAAAGCTGCAACATCCAATCAAA
ACAACACACACATGGTTCAGACGATAATTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCCATTTAGCTTCCTCCTCGCCATTCTCGCTCTCGCTCTCGTCCCCTCGCTCTACTATCCCTCAGTTGTTGCTGAGGAGATTCAAGGACAAGAGGTGGTTGA
AGCCTTCAAATGTTTTGACAATAAGTTTATATACAATGGGTGTGAAAGTGCTTACAGGCTAAACCCAAGTGGGAGTTTCAATGTCCCTCGTGAGGCTACTAATATGTTTT
GCAATGGACCGTGCTTGATTGAAACACAACTTGTGCTCAATTGCCTTAACGGTGCATTCGAAAACTTCTTGTTTTACAACAAAGCCACAGTGCAAAACTTCCAAAATGCC
CTTCGTGTTGGCTGCAGTTACTCAAGCCAAAGAGGTATATGGAACTTCAATGAAGGATTGTTTATGCAAGGAGAATTCAGCAGAAGCCAAAGCTGCAACATCCAATCAAA
ACAACACACACATGGTTCAGACGATAATTTATAG
Protein sequenceShow/hide protein sequence
MASPFSFLLAILALALVPSLYYPSVVAEEIQGQEVVEAFKCFDNKFIYNGCESAYRLNPSGSFNVPREATNMFCNGPCLIETQLVLNCLNGAFENFLFYNKATVQNFQNA
LRVGCSYSSQRGIWNFNEGLFMQGEFSRSQSCNIQSKQHTHGSDDNL