; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020690 (gene) of Chayote v1 genome

Gene IDSed0020690
OrganismSechium edule (Chayote v1)
DescriptionMSC domain-containing protein
Genome locationLG05:1981528..1989961
RNA-Seq ExpressionSed0020690
SyntenySed0020690
Gene Ontology termsGO:0005637 - nuclear inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606225.1 hypothetical protein SDJN03_03542, partial [Cucurbita argyrosperma subsp. sororia]7.0e-18582.49Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RLITV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKLSEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET+G
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG

Query:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI
        GLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+WV+
Subjt:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLASKSSSRMAMGVNSD  Y K++N LKAV+S
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

KAG7036172.1 hypothetical protein SDJN02_02973 [Cucurbita argyrosperma subsp. argyrosperma]8.5e-18381.68Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RL+TV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKLSEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET+G
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG

Query:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI
        GLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+WV+
Subjt:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVI
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLASKSSSRMAMGVNSD  Y K++N  +A I
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVI

XP_022958028.1 uncharacterized protein LOC111459381 isoform X1 [Cucurbita moschata]6.5e-18381.82Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RLITV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKL--SEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLET
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKL  SEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKL--SEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLET

Query:  VGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAW
        +GGLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+W
Subjt:  VGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAW

Query:  VIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        V+ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLASKSSSRM MGVNSD  Y K++N LKAV+S
Subjt:  VIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

XP_022958030.1 uncharacterized protein LOC111459381 isoform X3 [Cucurbita moschata]2.0e-18482.23Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RLITV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKLSEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET+G
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG

Query:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI
        GLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+WV+
Subjt:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLASKSSSRM MGVNSD  Y K++N LKAV+S
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

XP_038888162.1 uncharacterized protein LOC120078048 [Benincasa hispida]3.8e-18379.9Show/hide
Query:  MSSTPKRRSKSKRNPN--------SSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPK+R+K KRN N        SS  SSTMLLKSIKEPPRDFFPSKDDLA LITV+ +ACL+F SC+FF SRL +R+  PFCD+D DS DLLSD CEP
Subjt:  MSSTPKRRSKSKRNPN--------SSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG
        CP HGECR+GK++CLHGYRKHGRLC+EDGVIN+AV KLSEWLESHLCEANAKFLCDGIG VWVKEDDI DDLD + LVE+IG DNTT  YAKSK LET+G
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG

Query:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI
        GLFQT+QNSLG+KE KCPDLLAESYKPF+CRIRHWVLQHAF V+PV LLLVGC WLLWKLYRR+Y+TNRAEDLYNQVCEILEENALMSTRNSGQCE+WV+
Subjt:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVI
        ASRLRDHLLLPRERK+PLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLA+KS+S  AMGV++DQ + K++N  K ++
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVI

TrEMBL top hitse value%identityAlignment
A0A0A0LI89 MSC domain-containing protein2.1e-17977.17Show/hide
Query:  MSSTPKRRSKSKRNPN------------SSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSD
        MSSTPK+R+K KRNPN            SS  SS++LLKSIKEPPRDFFPSKDDLA LITV+++AC VF SCNFF SRL +R  +PFCD+D DS D +SD
Subjt:  MSSTPKRRSKSKRNPN------------SSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSD

Query:  ACEPCPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTL
         CEPCP HGECR+GK+ECLHGYRKHGRLC+EDGVIN+AV KLSEWLESHLCEANAKFLCDGIG VWVKE+DI DDLD + LVE+IG DNTT  YAKSK L
Subjt:  ACEPCPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTL

Query:  ETVGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCE
        ET+GGL QT+QNSLG+KE KCPDLLAESYKPF+CRIRHWVLQHAFVV+PV LLLVGC WLLWKLYRR+YLTNRAEDLYNQVCEILEENAL STRNSGQCE
Subjt:  ETVGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCE

Query:  AWVIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSR------MAMGVNSDQTYRKIDNALK
        +WV+ASRLRDHLLLPRER++PLLW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS +++LASKS+S        A+GVN D  Y KI+N  K
Subjt:  AWVIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSR------MAMGVNSDQTYRKIDNALK

Query:  AVI
        AV+
Subjt:  AVI

A0A6J1E026 uncharacterized protein LOC111026156 isoform X11.5e-18079.7Show/hide
Query:  MSSTPKRRSKSKRNP--------NSSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR K K NP        +SSA SST+LLKS+K+PPRDFFPS++DL RLITV+ +ACLVF SCNFF SRL +RR  PFCD+D DS DLLSDAC+P
Subjt:  MSSTPKRRSKSKRNP--------NSSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG
        CPSHGECR G++EC+ GYRKHGRLC+EDGVIN+AVKKLSEWLESHLCEANAKF+CDG+G VWVKEDDI DDLD Q LVENIG DNTTF YAK K LET+ 
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG

Query:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI
        GLFQTQQNSLG++E KCPDLLAESYKPF+CRI HWVL+HAFVV+PV LLLVGC WLLWKLYRR++LTNRAE+LYNQVCEILEENALMS R SGQCE+WV+
Subjt:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKG+GKEVWEWQVEGSLSSSKE+RLASK SSR+AM VNSD+ YRK+D   K V+S
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

A0A6J1H1Y9 uncharacterized protein LOC111459381 isoform X13.2e-18381.82Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RLITV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKL--SEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLET
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKL  SEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKL--SEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLET

Query:  VGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAW
        +GGLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+W
Subjt:  VGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAW

Query:  VIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        V+ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLASKSSSRM MGVNSD  Y K++N LKAV+S
Subjt:  VIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

A0A6J1H2A7 uncharacterized protein LOC111459381 isoform X39.8e-18582.23Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RLITV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKLSEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET+G
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVG

Query:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI
        GLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+WV+
Subjt:  GLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVI

Query:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKE+RLASKSSSRM MGVNSD  Y K++N LKAV+S
Subjt:  ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

A0A6J1H3U4 uncharacterized protein LOC111459381 isoform X23.0e-18181.57Show/hide
Query:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP
        MSSTPKRR+K K N NS           SS +LL SIK PPRDFFPSKDDL RLITV+ +A LVF SCNFF SRLETRR  PFCDSD DSFDLLSDACEP
Subjt:  MSSTPKRRSKSKRNPNSS--------AKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEP

Query:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKL--SEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLET
        CPSHGEC EGK+EC HGYR+HGRLC+EDGVIN AVKKL  SEWLESHLCEANAKFLCDGIG VWV+ED I DDLD + LVENI  DNTT  YAKSK LET
Subjt:  CPSHGECREGKMECLHGYRKHGRLCMEDGVINDAVKKL--SEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLET

Query:  VGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAW
        +GGLFQ +QN+LG+KE KCPD LAESYKPF+CRIRHWVLQHAFVV+PVSLLLVGC WLLWKL RR+YLTNRAEDLYNQVCEILEENALMSTRNSGQCE+W
Subjt:  VGGLFQTQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAW

Query:  VIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS
        V+ASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ EGSLSSSKE+RLASKSSSRM MGVNSD  Y K++N LKAV+S
Subjt:  VIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G46560.1 CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).2.2e-9146.39Show/hide
Query:  MSSTPKRRSKSK----RNPNSSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEPCPSH
        M S P++R KS+    R P SS+ SS   ++S+ EPP+  FPSK +   L+ V+LVAC V  +CNF +  L +  +  FCDS+ +  D   D CEPCP +
Subjt:  MSSTPKRRSKSK----RNPNSSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEPCPSH

Query:  GECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVGGLFQ
        GEC +GK++C  GY+    LC+EDG IN++ KKL  + E  +CE+ A   C G G +WV E+D+  +L     + N+  D + + + K K +E V  L +
Subjt:  GECREGKMECLHGYRKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVGGLFQ

Query:  TQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMS-TRNSGQCEAWVIASR
         + NS G+ E KCP+ +A+SYKP +CR+  W+L+H  ++     +LVG A L  ++ R++  + R E+LY+QVC+ LEENA+ S +  +  CE WVIAS 
Subjt:  TQQNSLGMKEWKCPDLLAESYKPFSCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMS-TRNSGQCEAWVIASR

Query:  LRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERR
        LRD+LLLPRER+DPLLW KVEEL++EDSRIDRY +L+KG+ K VWEWQVEGSLS SK ++
Subjt:  LRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKERR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCAACTCCGAAGAGGCGATCGAAATCGAAGCGAAATCCAAATTCCTCTGCTAAATCTTCTACAATGTTGCTGAAATCCATCAAGGAACCGCCTCGCGATTTCTT
CCCTTCGAAGGATGATCTTGCTAGGTTAATCACTGTGATTCTCGTCGCCTGCTTGGTGTTTGCGAGCTGTAACTTCTTTGCATCTAGGCTTGAAACTCGCCGCGCGATGC
CTTTCTGCGATTCCGACGTTGATTCTTTCGATTTGCTTTCCGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCGTGAAGGTAAGATGGAATGCCTTCATGGTTAT
AGAAAGCATGGAAGGTTATGTATGGAAGATGGAGTAATCAACGACGCAGTTAAGAAACTTTCGGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTCTTATG
CGATGGAATTGGGAAAGTCTGGGTTAAAGAGGATGATATTTGTGATGATCTCGATTGTCAAATGCTGGTAGAAAATATTGGCTTTGACAACACCACTTTTAAGTATGCAA
AAAGCAAGACACTAGAAACTGTTGGTGGGTTATTTCAGACGCAGCAAAATTCTCTTGGGATGAAAGAATGGAAATGCCCAGATCTCCTAGCGGAAAGTTACAAGCCTTTT
AGTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTATGCCAGTTTCTCTACTGCTTGTGGGATGCGCATGGTTACTATGGAAACTTTATCGGAGACGATA
TCTAACAAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTCGAGGAAAATGCTTTGATGTCAACGAGGAACAGTGGCCAATGTGAAGCATGGGTCATTGCTT
CTAGGTTACGCGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTGTTATGGAGGAAGGTAGAAGAGTTGGTTCAAGAAGACTCACGAATAGATCGTTACCCAAGA
TTGGTCAAGGGTGATGGAAAAGAAGTATGGGAATGGCAAGTTGAAGGCTCTTTGAGCTCATCAAAGGAAAGGAGACTGGCCAGCAAATCCAGTTCCAGGATGGCAATGGG
AGTAAATTCTGATCAAACATACCGCAAAATTGATAACGCGCTGAAGGCAGTCATTTCGTGA
mRNA sequenceShow/hide mRNA sequence
GCGCCACCAACGAAGCCTAACCCCAATTATCCAAAGCTAAAAAAAAAGGGCCAAAAGAACGAAGCTGGAGACTGAGAAGAGCGCGGCCGCGAAGAACGACGAAATCGATG
TCTTCAACTCCGAAGAGGCGATCGAAATCGAAGCGAAATCCAAATTCCTCTGCTAAATCTTCTACAATGTTGCTGAAATCCATCAAGGAACCGCCTCGCGATTTCTTCCC
TTCGAAGGATGATCTTGCTAGGTTAATCACTGTGATTCTCGTCGCCTGCTTGGTGTTTGCGAGCTGTAACTTCTTTGCATCTAGGCTTGAAACTCGCCGCGCGATGCCTT
TCTGCGATTCCGACGTTGATTCTTTCGATTTGCTTTCCGATGCTTGTGAGCCTTGTCCAAGTCATGGAGAATGCCGTGAAGGTAAGATGGAATGCCTTCATGGTTATAGA
AAGCATGGAAGGTTATGTATGGAAGATGGAGTAATCAACGACGCAGTTAAGAAACTTTCGGAATGGCTAGAATCTCACCTCTGTGAAGCAAATGCCAAGTTCTTATGCGA
TGGAATTGGGAAAGTCTGGGTTAAAGAGGATGATATTTGTGATGATCTCGATTGTCAAATGCTGGTAGAAAATATTGGCTTTGACAACACCACTTTTAAGTATGCAAAAA
GCAAGACACTAGAAACTGTTGGTGGGTTATTTCAGACGCAGCAAAATTCTCTTGGGATGAAAGAATGGAAATGCCCAGATCTCCTAGCGGAAAGTTACAAGCCTTTTAGT
TGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTATGCCAGTTTCTCTACTGCTTGTGGGATGCGCATGGTTACTATGGAAACTTTATCGGAGACGATATCT
AACAAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTCGAGGAAAATGCTTTGATGTCAACGAGGAACAGTGGCCAATGTGAAGCATGGGTCATTGCTTCTA
GGTTACGCGACCATCTTCTTTTGCCACGAGAGAGGAAGGATCCTTTGTTATGGAGGAAGGTAGAAGAGTTGGTTCAAGAAGACTCACGAATAGATCGTTACCCAAGATTG
GTCAAGGGTGATGGAAAAGAAGTATGGGAATGGCAAGTTGAAGGCTCTTTGAGCTCATCAAAGGAAAGGAGACTGGCCAGCAAATCCAGTTCCAGGATGGCAATGGGAGT
AAATTCTGATCAAACATACCGCAAAATTGATAACGCGCTGAAGGCAGTCATTTCGTGACACCACGCTCGACTGAGAGGATACTGAGCTTAGCTGGTTAGTAGGAAAGAAT
CAGAAAAGGTCGAATATTCCGAGCATTTTGCAACGTGCAGAAGAATTTGAGAAGAAAGGTCCAAGGTGATTTGTCACTGAAAGGCAAAGATAAGATTACCTGCCTGTGAT
CTTTTCCGGACCCCCCTTCTGCCTCCCCGTGGCAGGCGGCTTTACAAAAGCTGCTTTGCTGGACCAATCAAAACATGCCCACTATTGTTGGTCGCTTTGCTTAATTTTGT
GCATTATTTAGGGGTATCTAGG
Protein sequenceShow/hide protein sequence
MSSTPKRRSKSKRNPNSSAKSSTMLLKSIKEPPRDFFPSKDDLARLITVILVACLVFASCNFFASRLETRRAMPFCDSDVDSFDLLSDACEPCPSHGECREGKMECLHGY
RKHGRLCMEDGVINDAVKKLSEWLESHLCEANAKFLCDGIGKVWVKEDDICDDLDCQMLVENIGFDNTTFKYAKSKTLETVGGLFQTQQNSLGMKEWKCPDLLAESYKPF
SCRIRHWVLQHAFVVMPVSLLLVGCAWLLWKLYRRRYLTNRAEDLYNQVCEILEENALMSTRNSGQCEAWVIASRLRDHLLLPRERKDPLLWRKVEELVQEDSRIDRYPR
LVKGDGKEVWEWQVEGSLSSSKERRLASKSSSRMAMGVNSDQTYRKIDNALKAVIS