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Sed0020698 (gene) of Chayote v1 genome

Gene IDSed0020698
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG01:1842015..1842308
RNA-Seq ExpressionSed0020698
SyntenySed0020698
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146170.1 auxin-responsive protein SAUR21-like [Momordica charantia]3.2e-4695.88Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]9.4e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022944366.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.1e-4593.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRF+VPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]3.2e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022947577.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]9.4e-4693.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like1.6e-4695.88Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like4.5e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G6U7 auxin-responsive protein SAUR21-like4.5e-4693.81Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G772 auxin-responsive protein SAUR21-like1.6e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLS VPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like4.5e-4694.85Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIR LS VPHAKQILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR226.8e-2363.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR211.2e-2260.71Show/hide
Query:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   ++        PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR202.3e-2358.89Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR198.9e-2357.78Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2358.89Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.2e-2860.2Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        M IR+   +  +KQ+LK   S + N + +PKGH+AVYVGE +Q++RFVVP+TYL+HP FQ+LL  AEEEFGF HP GGLTIPC E  FIDL SRL  S
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family7.5e-2553.7Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI
        MG+ + S +P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPI+YLNHP F++ L+ AEEE GFHH  GGLTIPC+E++F+
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFI

Query:  DLTSRLQV
         L +  Q+
Subjt:  DLTSRLQV

AT4G34810.1 SAUR-like auxin-responsive protein family4.7e-2757.14Show/hide
Query:  MGIRLLSFVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-
        MG+   +     KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPI++LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSFVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family4.7e-2759.79Show/hide
Query:  MGIRLLSFVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR
        M IR+   +  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP++YL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLLSFVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2458.89Show/hide
Query:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        ++FV       K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACC
CACAAGGGGGCCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTGCTATCGTTTGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCATGTAGCCGTTTA
TGTGGGAGAGATCCAAAGGAAGCGGTTTGTGGTTCCGATAACTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACC
CACAAGGGGGCCTAACAATTCCTTGCAAAGAGGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSFVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS