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Sed0020714 (gene) of Chayote v1 genome

Gene IDSed0020714
OrganismSechium edule (Chayote v1)
DescriptionCASP-like protein
Genome locationLG03:500773..501866
RNA-Seq ExpressionSed0020714
SyntenySed0020714
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458887.1 PREDICTED: CASP-like protein 4D1 [Cucumis melo]9.6e-4874.17Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKM TKIASFVLRV+TF+FL +S+IVL T S     ++  FHNV+SYRYAMATIIIGGAFNLLQIALALYRLVTKTD +ILF+FYGDKVLSY LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        AA LG  +DLK N+ D   S FDQGNAAAALLLL+F CSA++SVLSSLALS
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS

XP_022939465.1 CASP-like protein 4D1 [Cucurbita moschata]3.1e-4671.61Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKMGTKIASFVLRV+TF+FL IS+IVL T S     E  +FHNV+SYR+AMATIIIGGAFNLLQIALALYRL+TK+D  +LF+F+GDKVLSY LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST
        AA LG  IDLK N+ D   S FDQGNAAAALLLL+F CSA++SVLSS ALS   T
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST

XP_022992769.1 CASP-like protein 4D1 [Cucurbita maxima]8.1e-4772.9Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKMGTKIASFVLRV+TF+FL IS+IVL T S     E  +FHNV+SYR+AMATIIIGGAFNLLQIALALYRL+TKTD  +LF+F+GDKVLSY LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST
        AA LG  IDLK N+ D   S FDQGNAAAALLLL+F CSAV+SVLSS ALS   T
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST

XP_031741109.1 CASP-like protein 4D1 isoform X1 [Cucumis sativus]9.6e-4872.85Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKMGTKIASFVLRV+ F FL IS+IVL T S      ++ FHNV+SYR+AMATII+GGAFNLLQIAL+LYRL+TKTD +ILF+FYGDK+LSY+LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        AA LG  IDLK N+S E +S FDQGNAAAALLLL+F CSA++SVLSSLALS
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS

XP_038877615.1 CASP-like protein 4D1 [Benincasa hispida]4.3e-4875.32Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKMG+KIAS VLRVVTF+FL IS+IVLAT S         FHNV+SYRYA+ TIIIGGAFNLLQIALALYRLVTKTD N+LF+FYGDKVLSY+LLSGA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNS
        AA LG GIDLK NL +  AS FD GNA AALLLL+FFCSAV+SVLSSLALS  +
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNS

TrEMBL top hitse value%identityAlignment
A0A1S3C911 CASP-like protein4.6e-4874.17Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKM TKIASFVLRV+TF+FL +S+IVL T S     ++  FHNV+SYRYAMATIIIGGAFNLLQIALALYRLVTKTD +ILF+FYGDKVLSY LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        AA LG  +DLK N+ D   S FDQGNAAAALLLL+F CSA++SVLSSLALS
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS

A0A6J1BZ60 CASP-like protein1.0e-4270.75Show/hide
Query:  MGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGAAAGL
        MG+KIAS VLRVVTF+FLFIS+IVLAT +S+G   +  FHNV+SYR+AMATIIIGGAFNLLQIAL+LY +++K+  N+LF FYGDKVLSY+LLSGAAAGL
Subjt:  MGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGAAAGL

Query:  GGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        GGGIDL  N+ +   S F +GNAAAALLL++F CSA +S+LSSLALS
Subjt:  GGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS

A0A6J1C1A4 CASP-like protein3.0e-3152.83Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSS---KGYREDNR--FHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYL
        M A  G++IAS +LR++TF+ +FISL+++AT S    KG   + +  F +V SYRY  A  +IG A +LLQIAL LY +VTK+D    F+ + DK+L+YL
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSS---KGYREDNR--FHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYL

Query:  LLSGAAAGLGGGIDLKLNLSD----EHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL
        LLSGA+AGLG GIDL+ N  D       S FD+G+A+AA+LLL+F CSAV+S+LSSLAL
Subjt:  LLSGAAAGLGGGIDLKLNLSD----EHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL

A0A6J1FMS6 CASP-like protein1.5e-4671.61Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKMGTKIASFVLRV+TF+FL IS+IVL T S     E  +FHNV+SYR+AMATIIIGGAFNLLQIALALYRL+TK+D  +LF+F+GDKVLSY LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST
        AA LG  IDLK N+ D   S FDQGNAAAALLLL+F CSA++SVLSS ALS   T
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST

A0A6J1JYE7 CASP-like protein3.9e-4772.9Show/hide
Query:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA
        M AKMGTKIASFVLRV+TF+FL IS+IVL T S     E  +FHNV+SYR+AMATIIIGGAFNLLQIALALYRL+TKTD  +LF+F+GDKVLSY LL+GA
Subjt:  MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGA

Query:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST
        AA LG  IDLK N+ D   S FDQGNAAAALLLL+F CSAV+SVLSS ALS   T
Subjt:  AAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNST

SwissProt top hitse value%identityAlignment
A1XGB4 CASP-like protein PIMP14.1e-1741.61Show/hide
Query:  SFVLRVVTFIFLFISLIVLA----TCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKT----DDNILFNFYGDKVLSYLLLSGAAA
        S ++R++T I L IS IV+A    T S+       +F +  +YRY +AT+IIG A+ LLQIA ++  L T      +  +LF+FYGDK +SY L++GAAA
Subjt:  SFVLRVVTFIFLFISLIVLA----TCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKT----DDNILFNFYGDKVLSYLLLSGAAA

Query:  GLGGGIDLK-LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL
          G   DLK L  SD ++   +  NAAA+L L+ FF +   S+ SS  L
Subjt:  GLGGGIDLK-LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL

B9NBE5 CASP-like protein 4D11.5e-1942.04Show/hide
Query:  MGTKIASFVLRVVTFIFLFISLIVLATCSSK---GYREDN-RFHNVSSYRYAMATIIIGGAFNLLQIALALYRL------VTKTDDNILFNFYGDKVLSY
        M +++ +  LRV+TF FL +SL+++ T +     G  E   R  +  SYRY +A I  G  + +LQIAL L  +       T  D N++F+FYGDKV+SY
Subjt:  MGTKIASFVLRVVTFIFLFISLIVLATCSSK---GYREDN-RFHNVSSYRYAMATIIIGGAFNLLQIALALYRL------VTKTDDNILFNFYGDKVLSY

Query:  LLLSGAAAGLGGGIDLKLNLSDEHA-SLFDQGNAAAALLLLSFFCSAVLSVLSSLAL
        +L +GAAA  G   +LK  L+       F++G A+A+LLLL F C+A+LSV SS AL
Subjt:  LLLSGAAAGLGGGIDLKLNLSDEHA-SLFDQGNAAAALLLLSFFCSAVLSVLSSLAL

B9SXY8 CASP-like protein 4D11.1e-2242.68Show/hide
Query:  MGTKIASFVLRVVTFIFLFISLIVL----ATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDDNILFNFYGDKVLSYL
        + +++A+ +LR++TFIFL  SL++L    AT           F +V +YRY +ATI+IG A+ +LQIA  LY + T       D N+ F+F+GDKV+SY+
Subjt:  MGTKIASFVLRVVTFIFLFISLIVL----ATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDDNILFNFYGDKVLSYL

Query:  LLSGAAAGLGGGIDLK--LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL
        L++GAAAG     D+K   + S +  +  ++G A+A+LLL+ F C+AVLSV SS AL
Subjt:  LLSGAAAGLGGGIDLK--LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL

C6T1Z6 CASP-like protein 4D12.1e-2140.79Show/hide
Query:  GTKIASFVLRVVTFIFLFISLIVLATCSSKGYRE--DNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDDNILFNFYGDKVLSYLLLS
        G++    +LRV+TF+FL I+LI++A           + +F+++ +YRY ++TIIIG A+NLLQ+AL+++ +V+       D   LF+F+GDK++SYLL+S
Subjt:  GTKIASFVLRVVTFIFLFISLIVLATCSSKGYRE--DNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT-----KTDDNILFNFYGDKVLSYLLLS

Query:  GAAAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL
        G+AAG G  ++L   +     S  D+ NA+A+LLL++F  +AV S  +S AL
Subjt:  GAAAGLGGGIDLKLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLAL

D7LD59 CASP-like protein 4D24.8e-1839.87Show/hide
Query:  KIASFVLRVVTFIFLFISLIVLATCS----SKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDDNILFNFYGDKVLSYLLLSGAA
        K++  +LRV+T +FL I+LI+L+T S    S+G      F +V +YRY ++  +IG  + ++Q+   +    T  K   N   +FYGDK++SYL+ +G+A
Subjt:  KIASFVLRVVTFIFLFISLIVLATCS----SKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDDNILFNFYGDKVLSYLLLSGAA

Query:  AGLGGGIDLK--------LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        AG G   DLK        L+ +D     F +G A+A+LLL SF C AVLSV SSLA++
Subjt:  AGLGGGIDLK--------LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)4.9e-1838.61Show/hide
Query:  KIASFVLRVVTFIFLFISLIVLATCS----SKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDDNILFNFYGDKVLSYLLLSGAA
        K+   +LRV+T +FL I+LI+L+T S    S+G      F +V +YRY ++  +IG  + ++Q+   +    T  K   N   +FYGDK++SYL+ +G+A
Subjt:  KIASFVLRVVTFIFLFISLIVLATCS----SKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT--KTDDNILFNFYGDKVLSYLLLSGAA

Query:  AGLGGGIDLK--------LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        AG G   DLK        L+ +D     F +G A+A+LLL +F C AVLSV SS A++
Subjt:  AGLGGGIDLK--------LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS

AT2G39530.1 Uncharacterised protein family (UPF0497)3.0e-1539.35Show/hide
Query:  VLRVVTFIFLFISLIVLAT------CSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT-KTDD-NILFNFYGDKVLSYLLLSGAAAGL
        +LRV+T  FL I++++++T       SS   +    F++V +YRY ++  +IG  + ++Q+ L + +  T KT      F+FYGDKV+SYLL +G+AAG 
Subjt:  VLRVVTFIFLFISLIVLAT------CSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVT-KTDD-NILFNFYGDKVLSYLLLSGAAAGL

Query:  GGGIDLK--------LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS
        G   DLK         + +D     F +G A+A+LLL +F   AVLSV SSLALS
Subjt:  GGGIDLK--------LNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCAAAAATGGGTACAAAAATTGCTTCTTTTGTGCTCAGAGTTGTCACTTTTATTTTCCTTTTCATTTCACTTATAGTTTTAGCAACTTGTTCTTCCAAAGGCTA
CCGAGAGGATAATCGTTTCCATAATGTCAGTTCCTATAGGTATGCCATGGCAACCATCATCATTGGAGGTGCATTCAACCTCTTGCAAATTGCCTTAGCTCTTTACCGTC
TCGTGACCAAAACCGACGACAATATTTTATTCAACTTTTACGGTGACAAGGTATTGTCGTACCTGCTGCTGTCGGGAGCTGCGGCGGGGCTCGGTGGTGGAATAGACTTG
AAGTTGAATTTGTCGGACGAACACGCATCATTGTTCGACCAGGGCAATGCAGCTGCGGCTCTTCTTCTTCTCTCCTTTTTCTGCTCTGCTGTTCTTTCTGTTCTTTCTTC
TTTGGCCCTTTCTACTAATTCTACCATACCTAATTAA
mRNA sequenceShow/hide mRNA sequence
CAAATTTCATTAGCATTAAGATAAGCACAAAAATGGGAGCAAAAATGGGTACAAAAATTGCTTCTTTTGTGCTCAGAGTTGTCACTTTTATTTTCCTTTTCATTTCACTT
ATAGTTTTAGCAACTTGTTCTTCCAAAGGCTACCGAGAGGATAATCGTTTCCATAATGTCAGTTCCTATAGGTATGCCATGGCAACCATCATCATTGGAGGTGCATTCAA
CCTCTTGCAAATTGCCTTAGCTCTTTACCGTCTCGTGACCAAAACCGACGACAATATTTTATTCAACTTTTACGGTGACAAGGTATTGTCGTACCTGCTGCTGTCGGGAG
CTGCGGCGGGGCTCGGTGGTGGAATAGACTTGAAGTTGAATTTGTCGGACGAACACGCATCATTGTTCGACCAGGGCAATGCAGCTGCGGCTCTTCTTCTTCTCTCCTTT
TTCTGCTCTGCTGTTCTTTCTGTTCTTTCTTCTTTGGCCCTTTCTACTAATTCTACCATACCTAATTAAGTAGTTTCCTTTTTCTATTAAATTATTTGAATGTGTGGTCT
GATATCACCATATCAATTGTTACCTACAATTTAAGAGCCTGAGGATCTTGGAATTCTTTTTTAGTAAAATAATAAAAGTAACGAATTTCATTGTAAATTCTTTTATAATA
ATGTTTGTCAAAAGATTCAAACTTATTTCGTATGAGAATTCAATTGGCTTTTACGGGGC
Protein sequenceShow/hide protein sequence
MGAKMGTKIASFVLRVVTFIFLFISLIVLATCSSKGYREDNRFHNVSSYRYAMATIIIGGAFNLLQIALALYRLVTKTDDNILFNFYGDKVLSYLLLSGAAAGLGGGIDL
KLNLSDEHASLFDQGNAAAALLLLSFFCSAVLSVLSSLALSTNSTIPN