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Sed0020765 (gene) of Chayote v1 genome

Gene IDSed0020765
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive family protein
Genome locationLG09:5530647..5531122
RNA-Seq ExpressionSed0020765
SyntenySed0020765
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592925.1 CDPK-related kinase 3, partial [Cucurbita argyrosperma subsp. sororia]6.8e-3679.38Show/hide
Query:  GERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV
        GERS QG+ K G+PKG LAI+VGH+SEEKQRFVVPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVDQFR VQA+ID+EIS   P   VPCFRV
Subjt:  GERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV

XP_022959927.1 auxin-responsive protein SAUR32-like [Cucurbita moschata]1.4e-3679Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV
        M + ERSSQG+ K G+PKG LAI+VGH+SEEKQRFVVPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVDQFR VQA+ID+EIS   P  LVPCFRV
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV

XP_023005102.1 auxin-responsive protein SAUR32-like [Cucurbita maxima]3.1e-3679Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV
        M + ERSSQG+ K G+PKG LAI+VGHESEEKQRFVVPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVDQFR VQA+ID+EIS   P   VPCFRV
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV

XP_023515188.1 auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]1.5e-3577Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV
        M + ERSSQG+ K G+PKG LAI+VGH+SEEKQRFVVPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVDQF+ VQA+ID+EIS   P   VPCFRV
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV

XP_038876020.1 auxin-responsive protein SAUR32 [Benincasa hispida]3.2e-3373.79Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP-----LVPC
        MG+GER SQGN K  +PKGCLAI+VGHESEEKQRF+VPVMY NHPLF++LLKEAE+EYGFDQKGTITIPCHV+QFR VQA+ID+E S          VPC
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP-----LVPC

Query:  FRV
        FRV
Subjt:  FRV

TrEMBL top hitse value%identityAlignment
A0A0A0KFM7 Uncharacterized protein3.4e-3373.27Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP----LVPCF
        MG+GERS +  S   +PKGCLAI+VGHESEEKQRFVVPV+YFNHPLF++LLKEAE EYGFDQKGTITIPCHV+QFR VQA+IDRE S         VPCF
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP----LVPCF

Query:  R
        R
Subjt:  R

A0A5A7TA19 Auxin-responsive family protein2.0e-3372.82Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP-----LVPC
        MG+GERS +  S   +PKGCLAI+VGHESEEKQRFVVPV+YFNHPLF++LLKEAE EYGFDQKGTITIPCHV+QFR VQA+IDRE S          VPC
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP-----LVPC

Query:  FRV
        FRV
Subjt:  FRV

A0A6J1H5X7 auxin-responsive protein SAUR32-like6.6e-3779Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV
        M + ERSSQG+ K G+PKG LAI+VGH+SEEKQRFVVPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVDQFR VQA+ID+EIS   P  LVPCFRV
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV

A0A6J1KS93 auxin-responsive protein SAUR32-like1.5e-3679Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV
        M + ERSSQG+ K G+PKG LAI+VGHESEEKQRFVVPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVDQFR VQA+ID+EIS   P   VPCFRV
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP--LVPCFRV

E5GCM6 Auxin-responsive family protein2.0e-3372.82Show/hide
Query:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP-----LVPC
        MG+GERS +  S   +PKGCLAI+VGHESEEKQRFVVPV+YFNHPLF++LLKEAE EYGFDQKGTITIPCHV+QFR VQA+IDRE S          VPC
Subjt:  MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQP-----LVPC

Query:  FRV
        FRV
Subjt:  FRV

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR369.0e-1555.22Show/hide
Query:  IPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVI
        +P+G LAI VG +  +  R +VP++YFNHPLF ELL+EAEKEYGF  +G ITIPC    F  V+  I
Subjt:  IPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVI

P32295 Indole-3-acetic acid-induced protein ARG71.0e-1044.29Show/hide
Query:  PKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQ-KGTITIPCHVDQFRNVQAVIDRE
        PKG LA+ VG   E  +RFV+PV + N PLF +LL +AE+E+G+D   G +TIPC  D F+++ + +  +
Subjt:  PKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQ-KGTITIPCHVDQFRNVQAVIDRE

Q41220 Auxin-responsive protein SAUR153.2e-1245.71Show/hide
Query:  SGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQ-KGTITIPCHVDQFRNVQAVI
        S  P+G +A+ VG   ++K+R+VVPV Y N PLF +LL ++E+E+G+D   G +TIPCH   F  V + I
Subjt:  SGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQ-KGTITIPCHVDQFRNVQAVI

Q9SGU2 Auxin-responsive protein SAUR711.6e-1143.84Show/hide
Query:  RSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNV
        R+ +   KS +P+G + + VGHE E   RFVV     NHP+F+ LLK++ +EYG++Q+G + IPCHV  F  +
Subjt:  RSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNV

Q9ZUZ3 Auxin-responsive protein SAUR324.9e-2963.54Show/hide
Query:  MGNGERS--------SQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISI
        MG GE++         Q      +PKGCLAI+VG + EE+QRF+VPV+YFNHPLFM+LLKEAE EYGFDQKGTITIPCHV++FR VQA+ID E S+
Subjt:  MGNGERS--------SQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISI

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family3.5e-3063.54Show/hide
Query:  MGNGERS--------SQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISI
        MG GE++         Q      +PKGCLAI+VG + EE+QRF+VPV+YFNHPLFM+LLKEAE EYGFDQKGTITIPCHV++FR VQA+ID E S+
Subjt:  MGNGERS--------SQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISI

AT3G61900.1 SAUR-like auxin-responsive protein family3.5e-3068.89Show/hide
Query:  NGERSSQGNSKSGI---PKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISID
        N   + + NSK GI   PKGCLAI+VG + EEKQRFVVPV YFNHPLFM+LL+EAE+EYGF+QKGTITIPCHV+ FR VQ +I+RE S+D
Subjt:  NGERSSQGNSKSGI---PKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISID

AT4G00880.1 SAUR-like auxin-responsive protein family8.0e-2772.86Show/hide
Query:  IPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDRE
        +PKGCLA++VG + EE++RFV+PVMYFNHPLF +LLKEAE+E+GF QKGTITIPCHV++FR VQ +IDRE
Subjt:  IPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDRE

AT4G12410.1 SAUR-like auxin-responsive protein family2.6e-1756.25Show/hide
Query:  IPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQ
        +P+G L + VG   ++ +R VVPV+YFNHPLF ELL++AE+ +GFDQ G ITIPC V  F  VQ
Subjt:  IPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQ

AT5G53590.1 SAUR-like auxin-responsive protein family5.4e-2363.89Show/hide
Query:  IPKGCLAIRVGHESEEK--QRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDRE
        +PKGC+AI VGHE +E+   RFVVP+++ +HPLF++LLKEAEKEYGF   G ITIPC VD+F++VQ VID E
Subjt:  IPKGCLAIRVGHESEEK--QRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGGAGAAAGATCAAGCCAAGGGAATTCAAAATCAGGGATTCCAAAGGGGTGTTTGGCAATAAGAGTTGGGCATGAAAGTGAAGAGAAACAAAGATTTGTTGT
TCCTGTCATGTATTTCAATCACCCCTTGTTCATGGAGCTCCTCAAAGAAGCTGAAAAGGAATATGGATTTGATCAAAAGGGAACCATCACTATTCCGTGTCACGTCGACC
AGTTTCGCAACGTTCAAGCCGTGATCGATCGAGAAATCTCGATCGATCAACCCCTTGTTCCTTGCTTTCGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAACTCCCAAACAACCATCTCTCTCCACAAAAACTCCAAAATTCTTTCAATTTCTTCACCCATTCCTCCATTTTTCAGTTCAATTTCATCCCAAAAAAAAAAAATC
ATAACTTTTAAAAAATGGGAAATGGAGAAAGATCAAGCCAAGGGAATTCAAAATCAGGGATTCCAAAGGGGTGTTTGGCAATAAGAGTTGGGCATGAAAGTGAAGAGAAA
CAAAGATTTGTTGTTCCTGTCATGTATTTCAATCACCCCTTGTTCATGGAGCTCCTCAAAGAAGCTGAAAAGGAATATGGATTTGATCAAAAGGGAACCATCACTATTCC
GTGTCACGTCGACCAGTTTCGCAACGTTCAAGCCGTGATCGATCGAGAAATCTCGATCGATCAACCCCTTGTTCCTTGCTTTCGGGTTTGATCGAGAAATTTATTCAACG
TGGCTGCCACAATGTGACGACTGCATCTTTAGGGAG
Protein sequenceShow/hide protein sequence
MGNGERSSQGNSKSGIPKGCLAIRVGHESEEKQRFVVPVMYFNHPLFMELLKEAEKEYGFDQKGTITIPCHVDQFRNVQAVIDREISIDQPLVPCFRV