; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020782 (gene) of Chayote v1 genome

Gene IDSed0020782
OrganismSechium edule (Chayote v1)
DescriptionProtein TIC 214
Genome locationLG09:32025207..32026157
RNA-Seq ExpressionSed0020782
SyntenySed0020782
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJA16202.1 Ycf1 80 [Siraitia grosvenorii]2.1e-1470.83Show/hide
Query:  QTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQN
        +T++      +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K+++
Subjt:  QTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQN
QKX48533.1 hypothetical chloroplast RF19 [Luffa acutangula]1.4e-1570.51Show/hide
Query:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        T K  +T      G +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
QSQ72357.1 Ycf1 protein [Benincasa hispida]1.2e-1469.23Show/hide
Query:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        T K  +T        +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
QWQ50148.1 hypothetical protein RF1 [Cyclanthera pedata]2.7e-1472.37Show/hide
Query:  KKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        KKL  K       +G S+KE DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  KKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
YP_010131140.1 hypothetical protein RF1 [Benincasa hispida]1.2e-1469.23Show/hide
Query:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        T K  +T        +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
TrEMBL top hitse value%identityAlignment
A0A6H0ER70 Protein TIC 2141.3e-1472.37Show/hide
Query:  KKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        KKL  K       +G S+KE DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  KKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
A0A6H0EU45 Protein TIC 2141.3e-1480.95Show/hide
Query:  KGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  KGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
A0A6H1XL12 Protein TIC 2141.0e-1470.83Show/hide
Query:  QTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQN
        +T++      +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K+++
Subjt:  QTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQN
A0A7D5C1X1 Protein TIC 2146.9e-1670.51Show/hide
Query:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        T K  +T      G +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
A0A7T3QP51 Uncharacterized protein5.9e-1569.23Show/hide
Query:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        T K  +T        +G SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  TVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
SwissProt top hitse value%identityAlignment
Q09FY8 Protein TIC 2143.3e-1562.03Show/hide
Query:  NTVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        +T+   + K   +    G SE+E DV IETTSETK TK+EQEGSTEED SPS++S+EKEDPDKIDETEEIRVN  +++K
Subjt:  NTVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
Q0G9Q4 Protein TIC 2142.5e-1580Show/hide
Query:  SEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        SE+E DV IET SETK TKQEQEGSTEED SPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  SEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
Q0ZIW0 Protein TIC 2147.4e-1576.19Show/hide
Query:  KGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        +G SE+E DV IE TSETK TKQEQE STEED SPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  KGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
Q4VZL0 Protein TIC 2141.1e-1553.54Show/hide
Query:  SMFLGIIWKLHLSVDSYNLKFLNTVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQ
        S+ L I W  +L       +  + +   +T +         SE+E DV IETTSETK TKQEQEGSTEEDTSPS+FS+EKEDPDKIDETEEIR+++K++
Subjt:  SMFLGIIWKLHLSVDSYNLKFLNTVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQ
Q68RU8 Protein TIC 2142.5e-1576.19Show/hide
Query:  KGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
        +G SE+E DV IET SETK  KQEQEGSTEED SPS+FS+EKEDPDKIDETEEIRVN K++ K
Subjt:  KGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNK
Arabidopsis top hitse value%identityAlignment
ATCG01000.1 Ycf1 protein6.4e-0666.04Show/hide
Query:  IETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEK-KQNK
        ++ TSET  TKQ+QE STEE   PS+FS+E ED DKIDE EEIRVN K K NK
Subjt:  IETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEK-KQNK
ATCG01130.1 Ycf1 protein6.4e-0666.04Show/hide
Query:  IETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEK-KQNK
        ++ TSET  TKQ+QE STEE   PS+FS+E ED DKIDE EEIRVN K K NK
Subjt:  IETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEK-KQNK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACATTCAATGTTTTTGGGCATTATTTGGAAATTGCATTTATCCGTAGATTCATATAATTTAAAGTTTTTAAATACGGTTAAGAAACTCCAAACTAAAAGAAACCT
TAGAAACGGAGCAAAGGGGGGAAGCGAGAAAGAAATAGATGTAGCAATAGAAACCACTTCCGAAACGAAGAGGACTAAACAGGAACAGGAGGGATCCACCGAAGAAGATA
CTTCTCCTTCCATTTTTTCAAAAGAAAAGGAGGATCCGGACAAAATTGATGAAACGGAAGAGATTCGAGTGAATGAAAAGAAACAAAACAAAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACATTCAATGTTTTTGGGCATTATTTGGAAATTGCATTTATCCGTAGATTCATATAATTTAAAGTTTTTAAATACGGTTAAGAAACTCCAAACTAAAAGAAACCT
TAGAAACGGAGCAAAGGGGGGAAGCGAGAAAGAAATAGATGTAGCAATAGAAACCACTTCCGAAACGAAGAGGACTAAACAGGAACAGGAGGGATCCACCGAAGAAGATA
CTTCTCCTTCCATTTTTTCAAAAGAAAAGGAGGATCCGGACAAAATTGATGAAACGGAAGAGATTCGAGTGAATGAAAAGAAACAAAACAAAGTATGA
Protein sequenceShow/hide protein sequence
MKHSMFLGIIWKLHLSVDSYNLKFLNTVKKLQTKRNLRNGAKGGSEKEIDVAIETTSETKRTKQEQEGSTEEDTSPSIFSKEKEDPDKIDETEEIRVNEKKQNKV