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Sed0020809 (gene) of Chayote v1 genome

Gene IDSed0020809
OrganismSechium edule (Chayote v1)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationLG12:27076345..27076785
RNA-Seq ExpressionSed0020809
SyntenySed0020809
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]7.7e-2680.95Show/hide
Query:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVG
        +SSSLSFS+QWLLATIALIIFGFLA+++YDAAVASASEVFQRLVVVSPLLLVVAVHWLSLG  GG    YN++ +A GFPWGVG
Subjt:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVG

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]8.2e-3674.38Show/hide
Query:  MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGS---YNHSQAAAGFPWGVGFLLLL
        MA Y+R     S +FS+QWLLATIALII GFLA++IYDAA+ASASEV QRLV+VSPLLLVV VHWLSLGGGGG  G    Y+H+Q A GFPWGVGFLLLL
Subjt:  MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGS---YNHSQAAAGFPWGVGFLLLL

Query:  VLFPWSVAILLLLLYLFFLTN
        +LFPWS AILLL+LY FFLTN
Subjt:  VLFPWSVAILLLLLYLFFLTN

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]4.3e-3783.64Show/hide
Query:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILL
        +SSSLSFS+QWLLATIALIIFGFLA+++YDAAVASASEVFQRLVVVSPLLLVVAVHWLSLG  GG    YN++ +A GFPWGVGFLLLL+LFPWSVAILL
Subjt:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILL

Query:  LLLYLFFLTN
        LLLY FFLTN
Subjt:  LLLYLFFLTN

XP_015957774.2 uncharacterized protein LOC107481931 [Arachis duranensis]2.6e-1348.54Show/hide
Query:  YSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGG------GGGCNGSYNHSQAAAGFPWGVGFLLLL
        YS   SSS  SFSE WL+   + +I GFL + +YDA +A+ASE+ QRL+V+SPLLL++ VHWLS G        G   G+ +    A G PWGV F+LLL
Subjt:  YSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGG------GGGCNGSYNHSQAAAGFPWGVGFLLLL

Query:  VLF
        + F
Subjt:  VLF

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]4.7e-3170.59Show/hide
Query:  MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGG-GGCNGSYNHSQAAAGFPWGVGFLLLLVL
        MA  +R G       SEQWLLAT+ALI FGFLA++IYDAAVAS +E+FQR+VVVSPLLLVVAVHWLS+GGG  GC      +QAA GFPWGVG LLLL+L
Subjt:  MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGG-GGCNGSYNHSQAAAGFPWGVGFLLLLVL

Query:  FPWSVAILLLLLYLFFLTN
        FPWS A+LLLLLY FFLTN
Subjt:  FPWSVAILLLLLYLFFLTN

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein2.1e-3783.64Show/hide
Query:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILL
        +SSSLSFS+QWLLATIALIIFGFLA+++YDAAVASASEVFQRLVVVSPLLLVVAVHWLSLG  GG    YN++ +A GFPWGVGFLLLL+LFPWSVAILL
Subjt:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILL

Query:  LLLYLFFLTN
        LLLY FFLTN
Subjt:  LLLYLFFLTN

A0A444ZSA4 Uncharacterized protein1.2e-1348.54Show/hide
Query:  YSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGG------GGGCNGSYNHSQAAAGFPWGVGFLLLL
        YS   SSS  SFSE WL+   + +I GFL + +YDA +A+ASE+ QRL+V+SPLLL++ VHWLS G        G   G+ +    A G PWGV F+LLL
Subjt:  YSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGG------GGGCNGSYNHSQAAAGFPWGVGFLLLL

Query:  VLF
        + F
Subjt:  VLF

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like2.1e-3783.64Show/hide
Query:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILL
        +SSSLSFS+QWLLATIALIIFGFLA+++YDAAVASASEVFQRLVVVSPLLLVVAVHWLSLG  GG    YN++ +A GFPWGVGFLLLL+LFPWSVAILL
Subjt:  SSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILL

Query:  LLLYLFFLTN
        LLLY FFLTN
Subjt:  LLLYLFFLTN

A0A6J1DUA1 uncharacterized protein LOC1110240802.3e-3170.59Show/hide
Query:  MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGG-GGCNGSYNHSQAAAGFPWGVGFLLLLVL
        MA  +R G       SEQWLLAT+ALI FGFLA++IYDAAVAS +E+FQR+VVVSPLLLVVAVHWLS+GGG  GC      +QAA GFPWGVG LLLL+L
Subjt:  MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGG-GGCNGSYNHSQAAAGFPWGVGFLLLLVL

Query:  FPWSVAILLLLLYLFFLTN
        FPWS A+LLLLLY FFLTN
Subjt:  FPWSVAILLLLLYLFFLTN

A0A6P4D1L0 uncharacterized protein LOC1074819311.2e-1348.54Show/hide
Query:  YSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGG------GGGCNGSYNHSQAAAGFPWGVGFLLLL
        YS   SSS  SFSE WL+   + +I GFL + +YDA +A+ASE+ QRL+V+SPLLL++ VHWLS G        G   G+ +    A G PWGV F+LLL
Subjt:  YSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGG------GGGCNGSYNHSQAAAGFPWGVGFLLLL

Query:  VLF
        + F
Subjt:  VLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACATATAGCAGACAAGGCAGTTCTTCAAGCTTGAGCTTCTCAGAGCAATGGCTTCTTGCAACCATTGCTCTTATAATCTTTGGTTTCTTGGCTTTTTCCATTTA
CGACGCCGCCGTCGCCTCGGCCTCCGAGGTGTTCCAGAGGCTTGTCGTCGTCTCGCCGCTGCTTTTGGTCGTTGCTGTCCACTGGCTGTCGCTCGGAGGCGGCGGAGGAT
GCAACGGTAGCTACAACCATAGCCAGGCAGCTGCGGGATTCCCATGGGGTGTTGGATTTCTTTTGCTTTTGGTTCTGTTTCCTTGGAGTGTTGCTATTCTTTTACTTTTG
CTTTATTTATTTTTTCTCACTAACTGA
mRNA sequenceShow/hide mRNA sequence
CACACTTGTTTTTAAGTACACACAAATTTTTTCCCACTCCTAAAGAAACATCAAAACAAGACCCTTTTCTTCTCTTCTCTTGTTATGGCCACATATAGCAGACAAGGCAG
TTCTTCAAGCTTGAGCTTCTCAGAGCAATGGCTTCTTGCAACCATTGCTCTTATAATCTTTGGTTTCTTGGCTTTTTCCATTTACGACGCCGCCGTCGCCTCGGCCTCCG
AGGTGTTCCAGAGGCTTGTCGTCGTCTCGCCGCTGCTTTTGGTCGTTGCTGTCCACTGGCTGTCGCTCGGAGGCGGCGGAGGATGCAACGGTAGCTACAACCATAGCCAG
GCAGCTGCGGGATTCCCATGGGGTGTTGGATTTCTTTTGCTTTTGGTTCTGTTTCCTTGGAGTGTTGCTATTCTTTTACTTTTGCTTTATTTATTTTTTCTCACTAACTG
A
Protein sequenceShow/hide protein sequence
MATYSRQGSSSSLSFSEQWLLATIALIIFGFLAFSIYDAAVASASEVFQRLVVVSPLLLVVAVHWLSLGGGGGCNGSYNHSQAAAGFPWGVGFLLLLVLFPWSVAILLLL
LYLFFLTN