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Sed0020835 (gene) of Chayote v1 genome

Gene IDSed0020835
OrganismSechium edule (Chayote v1)
Descriptionlow-molecular-weight cysteine-rich 26
Genome locationLG11:34024350..34025332
RNA-Seq ExpressionSed0020835
SyntenySed0020835
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52438.1 hypothetical protein Csa_008032 [Cucumis sativus]1.3e-0947.5Show/hide
Query:  MAKFSCSLFFIVFLIFS--------GVNATQCEEKLYE-GCLPKDCKERCLQKYP-ISSSECVAIPPIPFSYFCYCFHDC
        M++ S S FFIVFL+ S          NA  C +KLY+ GC+  +CK+RC  KYP  SSS+C+++PPIPF   C CF++C
Subjt:  MAKFSCSLFFIVFLIFS--------GVNATQCEEKLYE-GCLPKDCKERCLQKYP-ISSSECVAIPPIPFSYFCYCFHDC
KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]5.2e-2267.53Show/hide
Query:  MAKFSCSLFFIVFLIFS-------GVNATQCEEKLYEGCLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC
        MAKFSCSLFFI F + S       GV+AT+CE KLY+GCLPKDC ++C  KYP SSSECVA+PPIPF Y CYCF+DC
Subjt:  MAKFSCSLFFIVFLIFS-------GVNATQCEEKLYEGCLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC
TrEMBL top hitse value%identityAlignment
A0A0A0KS76 Uncharacterized protein6.5e-1047.5Show/hide
Query:  MAKFSCSLFFIVFLIFS--------GVNATQCEEKLYE-GCLPKDCKERCLQKYP-ISSSECVAIPPIPFSYFCYCFHDC
        M++ S S FFIVFL+ S          NA  C +KLY+ GC+  +CK+RC  KYP  SSS+C+++PPIPF   C CF++C
Subjt:  MAKFSCSLFFIVFLIFS--------GVNATQCEEKLYE-GCLPKDCKERCLQKYP-ISSSECVAIPPIPFSYFCYCFHDC
A0A0A0KU45 Uncharacterized protein2.5e-2267.53Show/hide
Query:  MAKFSCSLFFIVFLIFS-------GVNATQCEEKLYEGCLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC
        MAKFSCSLFFI F + S       GV+AT+CE KLY+GCLPKDC ++C  KYP SSSECVA+PPIPF Y CYCF+DC
Subjt:  MAKFSCSLFFIVFLIFS-------GVNATQCEEKLYEGCLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29290.1 low-molecular-weight cysteine-rich 264.0e-0433.33Show/hide
Query:  MAKFSCSLFFIVFLIFSGVNATQCEE------KLYEG--CLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC
        MAK SCS FFI+ L+FS +   +C+E       + +G  C   DC+  C   Y     +C   P +P    C C ++C
Subjt:  MAKFSCSLFFIVFLIFSGVNATQCEE------KLYEG--CLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGTTTTCTTGCTCCCTATTTTTCATTGTTTTCCTCATTTTCTCAGGAGTGAATGCAACTCAATGTGAGGAAAAGTTGTATGAAGGATGCTTACCTAAGGATTG
TAAGGAAAGATGCCTACAAAAGTATCCAATTTCATCATCTGAATGTGTTGCAATTCCTCCTATTCCCTTCAGCTATTTCTGCTATTGCTTCCATGATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGTTTTCTTGCTCCCTATTTTTCATTGTTTTCCTCATTTTCTCAGGAGTGAATGCAACTCAATGTGAGGAAAAGTTGTATGAAGGATGCTTACCTAAGGATTG
TAAGGAAAGATGCCTACAAAAGTATCCAATTTCATCATCTGAATGTGTTGCAATTCCTCCTATTCCCTTCAGCTATTTCTGCTATTGCTTCCATGATTGCTAA
Protein sequenceShow/hide protein sequence
MAKFSCSLFFIVFLIFSGVNATQCEEKLYEGCLPKDCKERCLQKYPISSSECVAIPPIPFSYFCYCFHDC