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Sed0020838 (gene) of Chayote v1 genome

Gene IDSed0020838
OrganismSechium edule (Chayote v1)
Descriptionsperm mitochondrial-associated cysteine-rich protein-like
Genome locationLG07:42578683..42579096
RNA-Seq ExpressionSed0020838
SyntenySed0020838
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607747.1 hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia]6.2e-3568.7Show/hide
Query:  PAKFLALISIFHLNSTI-YADDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPRNGY
        PAKFLAL+ +FHL S I  ADDA++ TP  C NC +CQSACRPPP   P LPP PPP IAEPEPLPVP  P NCPP  VQCC FMP P PPPPP   N  
Subjt:  PAKFLALISIFHLNSTI-YADDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPRNGY

Query:  IYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
        IYTP YNES SSFLK GLVSVL PVFG+  I
Subjt:  IYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

KAG7037325.1 hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3569.47Show/hide
Query:  PAKFLALISIFHLNSTI-YADDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPRNGY
        PAKFLAL+ +FHL S I  ADDA++ TP  C NC +CQSACRPPP   P LPP PPP IAEPEPLPVP  PANCPP  VQCC FMP P PPPPP   N  
Subjt:  PAKFLALISIFHLNSTI-YADDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPRNGY

Query:  IYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
        IYTP YNES SSFLK GLVSVL PVFG+  I
Subjt:  IYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

KGN44024.1 hypothetical protein Csa_011878 [Cucumis sativus]1.4e-3164.18Show/hide
Query:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPP--SIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPR
        FPAK LAL+ +F+LN+ + A DDAA+ TP  C NC ICQS C PPP EP PLP SPPP    AEPEPLP P APANCPP  VQCC F+P PPPPP     
Subjt:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPP--SIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPR

Query:  NGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
        NG +YTP+YN SSSSFL+ GL S L PVFGL+ I
Subjt:  NGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

XP_008463043.1 PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo]2.3e-3465.19Show/hide
Query:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPL---PPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGP
        FPAK LAL+ +F+LNS + A DDAA+ TP  C NC ICQS CRPP  EP PL   PP PP   AEPEPLP+P APANCPP  VQCC F+P PPPPP    
Subjt:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPL---PPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGP

Query:  RNGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
         NG IYTP+YNESSSSFL+ GL S L PVFGL+ I
Subjt:  RNGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

XP_011659730.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]1.4e-3164.18Show/hide
Query:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPP--SIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPR
        FPAK LAL+ +F+LN+ + A DDAA+ TP  C NC ICQS C PPP EP PLP SPPP    AEPEPLP P APANCPP  VQCC F+P PPPPP     
Subjt:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPP--SIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPR

Query:  NGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
        NG +YTP+YN SSSSFL+ GL S L PVFGL+ I
Subjt:  NGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

TrEMBL top hitse value%identityAlignment
A0A0A0K536 Uncharacterized protein6.9e-3264.18Show/hide
Query:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPP--SIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPR
        FPAK LAL+ +F+LN+ + A DDAA+ TP  C NC ICQS C PPP EP PLP SPPP    AEPEPLP P APANCPP  VQCC F+P PPPPP     
Subjt:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPP--SIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPR

Query:  NGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
        NG +YTP+YN SSSSFL+ GL S L PVFGL+ I
Subjt:  NGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

A0A1S3CI95 sperm mitochondrial-associated cysteine-rich protein-like1.1e-3465.19Show/hide
Query:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPL---PPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGP
        FPAK LAL+ +F+LNS + A DDAA+ TP  C NC ICQS CRPP  EP PL   PP PP   AEPEPLP+P APANCPP  VQCC F+P PPPPP    
Subjt:  FPAKFLALISIFHLNSTIYA-DDAAVVTPFPCSNCNICQSACRPPPYEPPPL---PPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGP

Query:  RNGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI
         NG IYTP+YNESSSSFL+ GL S L PVFGL+ I
Subjt:  RNGYIYTPLYNESSSSFLKGGLVSVLGPVFGLIFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCGGCGAGTTTCCCGGCCAAATTTCTGGCTCTCATTTCCATCTTCCACCTCAACTCCACCATCTATGCCGACGACGCTGCCGTGGTTACACCTTTCCCATGCTC
CAACTGCAACATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACCGCCACTGCCGCCATCGCCACCACCGTCGATTGCAGAGCCGGAGCCACTCCCGGTTCCGA
ACGCTCCCGCTAACTGCCCTCCCGCCGCTGTCCAGTGCTGCCCATTTATGCCTCTGCCGCCACCGCCACCGCCACCAGGGCCGCGGAATGGTTATATATACACGCCGCTT
TATAATGAGTCGTCTTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGGCCCTGTTTTTGGGTTGATCTTCATTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCGGCGAGTTTCCCGGCCAAATTTCTGGCTCTCATTTCCATCTTCCACCTCAACTCCACCATCTATGCCGACGACGCTGCCGTGGTTACACCTTTCCCATGCTC
CAACTGCAACATTTGTCAATCCGCCTGCCGCCCACCGCCGTACGAGCCACCGCCACTGCCGCCATCGCCACCACCGTCGATTGCAGAGCCGGAGCCACTCCCGGTTCCGA
ACGCTCCCGCTAACTGCCCTCCCGCCGCTGTCCAGTGCTGCCCATTTATGCCTCTGCCGCCACCGCCACCGCCACCAGGGCCGCGGAATGGTTATATATACACGCCGCTT
TATAATGAGTCGTCTTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGGCCCTGTTTTTGGGTTGATCTTCATTTCCTAA
Protein sequenceShow/hide protein sequence
MSPASFPAKFLALISIFHLNSTIYADDAAVVTPFPCSNCNICQSACRPPPYEPPPLPPSPPPSIAEPEPLPVPNAPANCPPAAVQCCPFMPLPPPPPPPGPRNGYIYTPL
YNESSSSFLKGGLVSVLGPVFGLIFIS