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Sed0020870 (gene) of Chayote v1 genome

Gene IDSed0020870
OrganismSechium edule (Chayote v1)
DescriptionCopper ion binding isoform 1
Genome locationLG11:27945892..27949310
RNA-Seq ExpressionSed0020870
SyntenySed0020870
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012707.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-4282.76Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA
        MAAARTAARI SRRFS SGKILSEEE+AAENIYIKKIEQEKLEKLARKGPKPEEK   SV +S+PSG+ +    ASTEK+S+DK+RNYAVVAGTVTI GA
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD
XP_004139491.1 uncharacterized protein At2g27730, mitochondrial [Cucumis sativus]4.0e-4387.18Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPA-GSGAASTEKVSTDKHRNYAVVAGTVTILG
        MAAARTAARI SRRFSS GKILSEEE+AAENIYIKK EQEKLEKLARKGPKPEEK G SV DSVPS + A  SGA+STEK+STDK RNYAVVAGTVTILG
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPA-GSGAASTEKVSTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVHD
        ALGWYLKSKKKPEEVHD
Subjt:  ALGWYLKSKKKPEEVHD
XP_022142661.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia]4.0e-4384.62Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA-ASTEKVSTDKHRNYAVVAGTVTILG
        MAAARTAARIVSRRFSSSGKILSEEE+AAEN+YIKK EQEKLEKLARKGPKPEEK GGS  DS+PSG+ + S + AS EK+STDKHRNYAVVAGTVTILG
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA-ASTEKVSTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVHD
        A+GWYLKSKKKPEEV D
Subjt:  ALGWYLKSKKKPEEVHD
XP_038893784.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]2.5e-4588.79Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA
        MAAARTAARI SRRFSSSGKILSEEE+AAEN+YIKK EQEKLEKLARKGPKPEEKAGGSVTDS+PSG+ + SG ASTEK+S+DKHRNYAVVAGTVTILGA
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEV D
Subjt:  LGWYLKSKKKPEEVHD
XP_038895664.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida]4.7e-4486.21Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA
        MAAARTAARI SRRFSSSGKILSEEE+AAEN+YIKKIEQEKLEKLARKGPKPEEK  GSV  SVPSG+ +    ASTEK+S+DKHRNYAVVAGTVTILGA
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD
TrEMBL top hitse value%identityAlignment
A0A0A0LT33 Uncharacterized protein1.9e-4387.18Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPA-GSGAASTEKVSTDKHRNYAVVAGTVTILG
        MAAARTAARI SRRFSS GKILSEEE+AAENIYIKK EQEKLEKLARKGPKPEEK G SV DSVPS + A  SGA+STEK+STDK RNYAVVAGTVTILG
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPA-GSGAASTEKVSTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVHD
        ALGWYLKSKKKPEEVHD
Subjt:  ALGWYLKSKKKPEEVHD
A0A1S3CEE3 uncharacterized protein At2g27730, mitochondrial4.8e-4280Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA---------ASTEKVSTDKHRNYAVV
        MAAARTAARI SRRFSSSGKILSEEE+AAEN+YIKK EQEKLEKLARKGPKPEEK G SV DSVPS + +GS +         AS+EK+STDK RNYAVV
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA---------ASTEKVSTDKHRNYAVV

Query:  AGTVTILGALGWYLKSKKKPEEVHD
        AGTVTILGALGWYLKSKKKPEEVHD
Subjt:  AGTVTILGALGWYLKSKKKPEEVHD
A0A5A7T219 Uncharacterized protein4.8e-4280Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA---------ASTEKVSTDKHRNYAVV
        MAAARTAARI SRRFSSSGKILSEEE+AAEN+YIKK EQEKLEKLARKGPKPEEK G SV DSVPS + +GS +         AS+EK+STDK RNYAVV
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA---------ASTEKVSTDKHRNYAVV

Query:  AGTVTILGALGWYLKSKKKPEEVHD
        AGTVTILGALGWYLKSKKKPEEVHD
Subjt:  AGTVTILGALGWYLKSKKKPEEVHD
A0A6J1CMV3 uncharacterized protein At2g27730, mitochondrial1.9e-4384.62Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA-ASTEKVSTDKHRNYAVVAGTVTILG
        MAAARTAARIVSRRFSSSGKILSEEE+AAEN+YIKK EQEKLEKLARKGPKPEEK GGS  DS+PSG+ + S + AS EK+STDKHRNYAVVAGTVTILG
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGA-ASTEKVSTDKHRNYAVVAGTVTILG

Query:  ALGWYLKSKKKPEEVHD
        A+GWYLKSKKKPEEV D
Subjt:  ALGWYLKSKKKPEEVHD
A0A6J1HVU8 uncharacterized protein At2g27730, mitochondrial1.1e-4181.9Show/hide
Query:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA
        MAAARTAARI SRRFS SGKILSEEE+AAENIYIKK EQEKLEKLARKGPKPEEK   SV +S+PSG+ + +  ASTEK+S+DK+RNYAVVAGTVTI GA
Subjt:  MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGA

Query:  LGWYLKSKKKPEEVHD
        LGWYLKSKKKPEEVHD
Subjt:  LGWYLKSKKKPEEVHD
SwissProt top hitse value%identityAlignment
Q9ZUX4 Uncharacterized protein At2g27730, mitochondrial9.3e-2763.39Show/hide
Query:  AARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGALG
        A R A RIVSRRF SSGK+LSEEERAAEN++IKK+EQEKL+KLAR+G  P E+A GS +++  +G  A + A S  KVS DK+RNYAVVAG V I+G++G
Subjt:  AARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGALG

Query:  WYLKS--KKKPE
        WYLK+  KK+PE
Subjt:  WYLKS--KKKPE
Arabidopsis top hitse value%identityAlignment
AT2G27730.1 copper ion binding6.6e-2863.39Show/hide
Query:  AARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGALG
        A R A RIVSRRF SSGK+LSEEERAAEN++IKK+EQEKL+KLAR+G  P E+A GS +++  +G  A + A S  KVS DK+RNYAVVAG V I+G++G
Subjt:  AARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGALG

Query:  WYLKS--KKKPE
        WYLK+  KK+PE
Subjt:  WYLKS--KKKPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCTAGAACGGCCGCGAGGATTGTTTCTCGGAGGTTCTCGAGCAGCGGCAAGATCCTCAGCGAGGAGGAACGGGCGGCTGAGAACATCTACATCAAGAAAAT
TGAACAAGAGAAACTTGAGAAGCTTGCTCGCAAGGGACCCAAACCAGAAGAAAAGGCAGGAGGGTCAGTAACCGATTCCGTTCCAAGCGGGACACCCGCCGGATCAGGAG
CAGCATCAACCGAGAAAGTATCTACCGACAAGCACCGCAACTATGCAGTTGTAGCCGGAACCGTGACTATTCTTGGCGCTCTTGGGTGGTACCTCAAATCTAAAAAGAAG
CCAGAAGAAGTCCATGACTGA
mRNA sequenceShow/hide mRNA sequence
CCCATCTTGAACCGATTCGTTTCTTAAGATCAAACGGCTCGGGTGGCTTGATCTCCACACATTTCGCCTCTGAATTTTTCTACATCTTCGACTACAAACCCCTATTCCAC
TTTCTCCACACCAATTTCCTCATTCCTCTCTCCGATTCTTCTCAATCTTCCGGAAAGCCGATCGATCGATCCCAATGGCAGCAGCTAGAACGGCCGCGAGGATTGTTTCT
CGGAGGTTCTCGAGCAGCGGCAAGATCCTCAGCGAGGAGGAACGGGCGGCTGAGAACATCTACATCAAGAAAATTGAACAAGAGAAACTTGAGAAGCTTGCTCGCAAGGG
ACCCAAACCAGAAGAAAAGGCAGGAGGGTCAGTAACCGATTCCGTTCCAAGCGGGACACCCGCCGGATCAGGAGCAGCATCAACCGAGAAAGTATCTACCGACAAGCACC
GCAACTATGCAGTTGTAGCCGGAACCGTGACTATTCTTGGCGCTCTTGGGTGGTACCTCAAATCTAAAAAGAAGCCAGAAGAAGTCCATGACTGAGCTAGCAAACAGCTT
GTTGTTTTTTTTTTTTTTCCATATCATCAGCATCTGGAGGAAGGATCAAATGTTCTTTATTGTTTCTACTGAATAAACCAGAGATCCAGATGTATAGGGCTCTTGGTTAA
TGAAAACACTATGTTCAGATTTTCTGCTTTGTTTTCTTTTCTGGAAAGTTAACAGTGAGAGACAGCATGTAAGCATGCTTTGTGACAAAGACTTTGTCTAATTGCGTTTC
ATTTTCACATTCA
Protein sequenceShow/hide protein sequence
MAAARTAARIVSRRFSSSGKILSEEERAAENIYIKKIEQEKLEKLARKGPKPEEKAGGSVTDSVPSGTPAGSGAASTEKVSTDKHRNYAVVAGTVTILGALGWYLKSKKK
PEEVHD