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Sed0020885 (gene) of Chayote v1 genome

Gene IDSed0020885
OrganismSechium edule (Chayote v1)
Descriptiontracheary element differentiation-related 6
Genome locationLG10:32405137..32405843
RNA-Seq ExpressionSed0020885
SyntenySed0020885
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR044950 - Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6/7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607661.1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 6, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4973.65Show/hide
Query:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV
        A N +NL R  PP PPSPSP+GHTAVIVI+FISLGSCL FF F+A A  CCFIKKR +K C   EVAEVI VDGHRKVHEDVAQ  HG +AV+VTIEDDV
Subjt:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV

Query:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS
        HIDEI KKKEH +HG GLHGKHEGSNSST+    SSSTLDSNV++H S
Subjt:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS

TYK04341.1 proline-rich receptor-like protein kinase PERK2 [Cucumis melo var. makuwa]2.1e-4470.75Show/hide
Query:  NGTNLARYPP-------PLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTI
        N +NL R PP       PLPP PSP GHTA+IVI+FISLGSCLFF AF+AT +CCFIKKRK+KSC PQEV E IR+DGHRKVHEDVA+  HG++A+VVTI
Subjt:  NGTNLARYPP-------PLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTI

Query:  EDDVHIDEIVKKKEHYKHGHGLHGK-HEG----SNSSTMDATASSST
        EDDVHIDEIVKKKEH  HGHGLHGK HEG    +NS+TM+  ASSS+
Subjt:  EDDVHIDEIVKKKEHYKHGHGLHGK-HEG----SNSSTMDATASSST

XP_022926281.1 uncharacterized protein LOC111433458 [Cucurbita moschata]1.9e-4570.95Show/hide
Query:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV
        A N +NL R  PP    PSP+GHTAVIVI+FISLGSCL FF F+A A  CCFIKKR +K C   EVAEVI VDGHRKVHEDVAQ  HG +AV+VTIEDDV
Subjt:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV

Query:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS
        H+DEI KKKEH +HG GLHGKHEGSNSST+    SSSTLDSNV++H S
Subjt:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS

XP_022981645.1 uncharacterized protein LOC111480702 [Cucurbita maxima]3.3e-5075Show/hide
Query:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV
        A N +NL R PPP PPSPSP+GHTAVIVI+FISLGSCL FF F+A A  CCFIKKR +K C   EVAEVIRVDGHRKVHEDVAQ  HG +AV VTIEDDV
Subjt:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV

Query:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS
        HIDEI KKKEH +HG GLHGKHEGSNSST+    SSSTLDSNV++H S
Subjt:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS

XP_023521688.1 uncharacterized protein LOC111785526 [Cucurbita pepo subsp. pepo]6.2e-4973.65Show/hide
Query:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV
        A N +NLAR  PP PPSPSP+GHTAVIVI+FISLGSCL FF F+A A  CCFIKKR +K C   +VAEVI VDGHRKVHEDVAQ  HG +AV+VTIEDDV
Subjt:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV

Query:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS
        HIDEI KKKEH +HG GLHGKHEGSNSST+    SSSTLDSNV++H S
Subjt:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS

TrEMBL top hitse value%identityAlignment
A0A0A0K4D1 Uncharacterized protein2.5e-4369.39Show/hide
Query:  NGTNLARYPPPLP-------PSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTI
        N +NL R PPP P       P PSP GHTA+IVI+FISLGSCLFF AF+A A+CCFIKKRK+KSC PQEV E I +DGHRKVHEDVA+  HG++AVVVTI
Subjt:  NGTNLARYPPPLP-------PSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTI

Query:  EDDVHIDEIVKKKEHYKHGHGLHGK-HEG----SNSSTMDATASSST
        EDD+HIDEIVKKKEH  HGHGLHGK HEG    +NS+TM+  ASSS+
Subjt:  EDDVHIDEIVKKKEHYKHGHGLHGK-HEG----SNSSTMDATASSST

A0A5D3BXC9 Proline-rich receptor-like protein kinase PERK21.0e-4470.75Show/hide
Query:  NGTNLARYPP-------PLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTI
        N +NL R PP       PLPP PSP GHTA+IVI+FISLGSCLFF AF+AT +CCFIKKRK+KSC PQEV E IR+DGHRKVHEDVA+  HG++A+VVTI
Subjt:  NGTNLARYPP-------PLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTI

Query:  EDDVHIDEIVKKKEHYKHGHGLHGK-HEG----SNSSTMDATASSST
        EDDVHIDEIVKKKEH  HGHGLHGK HEG    +NS+TM+  ASSS+
Subjt:  EDDVHIDEIVKKKEHYKHGHGLHGK-HEG----SNSSTMDATASSST

A0A6J1DM43 uncharacterized protein LOC1110217154.5e-2967.5Show/hide
Query:  HGHTAVIVIIFISLGSCLFFFAFIATAICCF-IKKRKEKSCRPQEVAEVIRVDGHRKVHEDVA--QGVHGEKAVVVTIEDDVHIDEIVKKKEHYKHGHG-
        +GH AVIVI+FISLG+C FFFA +  AICCF IKK+K+KSC  QEVAEVI VDGHRK+HE  A   G HG +AVVVTIED+V IDE++KKKEH   GHG 
Subjt:  HGHTAVIVIIFISLGSCLFFFAFIATAICCF-IKKRKEKSCRPQEVAEVIRVDGHRKVHEDVA--QGVHGEKAVVVTIEDDVHIDEIVKKKEHYKHGHG-

Query:  LHGKHE-GSNSSTMDATASS
        LHGKHE G NSS+M+   SS
Subjt:  LHGKHE-GSNSSTMDATASS

A0A6J1EEE4 uncharacterized protein LOC1114334589.1e-4670.95Show/hide
Query:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV
        A N +NL R  PP    PSP+GHTAVIVI+FISLGSCL FF F+A A  CCFIKKR +K C   EVAEVI VDGHRKVHEDVAQ  HG +AV+VTIEDDV
Subjt:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV

Query:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS
        H+DEI KKKEH +HG GLHGKHEGSNSST+    SSSTLDSNV++H S
Subjt:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS

A0A6J1J036 uncharacterized protein LOC1114807021.6e-5075Show/hide
Query:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV
        A N +NL R PPP PPSPSP+GHTAVIVI+FISLGSCL FF F+A A  CCFIKKR +K C   EVAEVIRVDGHRKVHEDVAQ  HG +AV VTIEDDV
Subjt:  ATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATA-ICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDV

Query:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS
        HIDEI KKKEH +HG GLHGKHEGSNSST+    SSSTLDSNV++H S
Subjt:  HIDEIVKKKEHYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS

SwissProt top hitse value%identityAlignment
C1PGW0 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 61.1e-0839.77Show/hide
Query:  AVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHI---DEIVKKKE
        A I I+F+S G C+F     A  +CC IK  K K  +  E  E++ VD H +VHE++ QG +G K V +T++DD+H+   +E VK ++
Subjt:  AVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHI---DEIVKKKE

C1PGW1 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A1.9e-1642.31Show/hide
Query:  PPP---LPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKK
        PPP    PP PSP  H+  IV+IF+S G  +FF AF   A+ CF+KK+K+K     + AE I  D HRKV E + QG HG +  ++++EDD+HI+E +KK
Subjt:  PPP---LPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKK

Query:  KEHYKHGHGLHGKHEGSNSSTMDATASSST
         E      GLH  +   N+  +D    SS+
Subjt:  KEHYKHGHGLHGKHEGSNSSTMDATASSST

Q8LBX7 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 66.7e-1443.62Show/hide
Query:  PSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE
        P+P+P   T V+V++F+SLG C+ F AF+A  I   IKKR  K    +E +E +RVD H K+ E + +G +G+K+VV+++EDDV I++ +K++E
Subjt:  PSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE

Q9FI79 Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 79.4e-1647.96Show/hide
Query:  PPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE
        PP PP+P+P  H  VI+++ ISLGS LFF AF+A A+ C++KKR++ S +    AE+I  D H KV E + QG HGE+  VV +E+D+H+ E + K E
Subjt:  PPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE

Arabidopsis top hitse value%identityAlignment
AT1G43790.1 tracheary element differentiation-related 64.8e-1543.62Show/hide
Query:  PSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE
        P+P+P   T V+V++F+SLG C+ F AF+A  I   IKKR  K    +E +E +RVD H K+ E + +G +G+K+VV+++EDDV I++ +K++E
Subjt:  PSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE

AT5G48920.1 tracheary element differentiation-related 76.7e-1747.96Show/hide
Query:  PPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE
        PP PP+P+P  H  VI+++ ISLGS LFF AF+A A+ C++KKR++ S +    AE+I  D H KV E + QG HGE+  VV +E+D+H+ E + K E
Subjt:  PPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAAATGGTACCAATCTCGCTCGCTACCCTCCGCCTCTGCCTCCGTCTCCATCACCACACGGTCACACCGCAGTTATCGTGATCATTTTCATTTCCTTAGGCTC
GTGTCTTTTCTTTTTCGCATTCATTGCAACTGCTATTTGTTGTTTCATCAAAAAGAGAAAAGAGAAATCATGTCGTCCACAAGAAGTCGCAGAAGTCATCCGTGTCGATG
GACACAGGAAGGTCCATGAAGACGTCGCACAAGGTGTGCATGGGGAGAAGGCTGTGGTGGTGACGATCGAGGACGATGTTCATATCGACGAGATAGTTAAGAAGAAAGAG
CATTATAAGCATGGTCATGGATTGCATGGTAAGCATGAAGGAAGCAATTCTAGCACAATGGACGCAACAGCTTCTTCTTCAACTTTGGATTCTAATGTTAGCAATCACCA
CTCTTGA
mRNA sequenceShow/hide mRNA sequence
CACTACTCTTTTCAACAACCAACATAGACATAAATCTTTCTTGACACCAAAAATGGCTACAAATGGTACCAATCTCGCTCGCTACCCTCCGCCTCTGCCTCCGTCTCCAT
CACCACACGGTCACACCGCAGTTATCGTGATCATTTTCATTTCCTTAGGCTCGTGTCTTTTCTTTTTCGCATTCATTGCAACTGCTATTTGTTGTTTCATCAAAAAGAGA
AAAGAGAAATCATGTCGTCCACAAGAAGTCGCAGAAGTCATCCGTGTCGATGGACACAGGAAGGTCCATGAAGACGTCGCACAAGGTGTGCATGGGGAGAAGGCTGTGGT
GGTGACGATCGAGGACGATGTTCATATCGACGAGATAGTTAAGAAGAAAGAGCATTATAAGCATGGTCATGGATTGCATGGTAAGCATGAAGGAAGCAATTCTAGCACAA
TGGACGCAACAGCTTCTTCTTCAACTTTGGATTCTAATGTTAGCAATCACCACTCTTGAAAAATATGTTGGTGGCAAAATGAATTTGTTCCTAAGAATAATAACGCCGTT
GTATTTACAATTACAACTTTAAATTGATACTTAATTCGATTGTTTCAATTTATTAATTAAATAAAATTATTGGCTCTCGAAATGTTATAAGAATTTATGATCAGCAGCAC
ATTCTACCTCTTGTATTATATTTGCAACAGAGTTTTTAAAATAATTT
Protein sequenceShow/hide protein sequence
MATNGTNLARYPPPLPPSPSPHGHTAVIVIIFISLGSCLFFFAFIATAICCFIKKRKEKSCRPQEVAEVIRVDGHRKVHEDVAQGVHGEKAVVVTIEDDVHIDEIVKKKE
HYKHGHGLHGKHEGSNSSTMDATASSSTLDSNVSNHHS