| GenBank top hits | e value | %identity | Alignment |
|---|
| BAA22288.1 polyprotein [Oryza australiensis] | 1.3e-35 | 71.43 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYM P+GF DP +PG++ +LQKSIYGLK+ SRSWN+RFDE K F F+KNEEE CVYKK+SG ++ FL+LYVDDILLIGND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
LESVK
Subjt: LESVK
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| KAF5757832.1 putative RNA-directed DNA polymerase [Helianthus annuus] | 3.1e-34 | 70.48 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYM PEGF DP NP +V +L KSIYGLK+ SR+WNLRFD+ KQF F+KNE+E CVYKK SG S+TFL+LYVDDILLIGN+ M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
L+ VK
Subjt: LESVK
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| KAF5783325.1 putative RNA-directed DNA polymerase [Helianthus annuus] | 6.2e-35 | 72.38 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYM PEGF DP NP +V +L KSIYGLK+ SRSWNLRFD+ KQF F+KNE+E CVYKK SG S+TFL+LYVDDILLIGND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
L VK
Subjt: LESVK
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| KAF5788164.1 putative RNA-directed DNA polymerase [Helianthus annuus] | 6.2e-35 | 72.38 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYM PEGF DP NP +V +L KSIYGLK+ SRSWNLRFD+ KQF F+KNE+E CVYKK SG S+TFL+LYVDDILLIGND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
L+ VK
Subjt: LESVK
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| KAG7543183.1 Reverse transcriptase RNA-dependent DNA polymerase [Arabidopsis thaliana x Arabidopsis arenosa] | 1.6e-35 | 73.33 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L+EDVYMT PEGF P N G+V +LQ+SIYGL+K SRSWNLRFDEA K+F F++NEEE CVYKK SG +V FLVLYVDDILLIGND +
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
L+SVK
Subjt: LESVK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6D2HJE2 CCHC-type domain-containing protein | 3.3e-34 | 70.48 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L+EDVYM PEGF P N G+V +LQ++IYGLK+ SRSWNLRFDEA K+F F++NEEE CVYKK SG +V FLVLYVDDI LIGND +
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
L+SVK
Subjt: LESVK
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| D3IVT9 Putative retrotransposon protein | 9.7e-34 | 70.48 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYMT PEGF DP N +V +LQKSIYGLK+ SRSWN+RFDE K+F F+KN+EE CVY K+SG ++ L+LYVDDILLIGND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
LESVK
Subjt: LESVK
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| D3IVU0 Putative retrotransposon protein | 1.3e-33 | 69.52 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYMT PEGF DP N +V +LQKSIYGLK+ SRSWN+RFDE K+F F+KN+EE CVY K+SG ++ L+LYVDDILL+GND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
LESVK
Subjt: LESVK
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| O23864 Polyprotein | 6.1e-36 | 71.43 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKTAFLN L EDVYM P+GF DP +PG++ +LQKSIYGLK+ SRSWN+RFDE K F F+KNEEE CVYKK+SG ++ FL+LYVDDILLIGND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
LESVK
Subjt: LESVK
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| Q2QQ28 Retrotransposon protein, putative, Ty1-copia subclass | 9.7e-34 | 69.52 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDVKT FLN L EDVYMT P+GF DP + ++ +LQKSIYGLK+ SRSWN+RFDE K RF+KNEEE CVYKK+SG ++ FL+LYVDDILLIGND M
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
LESVK
Subjt: LESVK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-14 | 39.25 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVY--KKLSGISVTFLVLYVDDILLIGNDR
MDVKTAFLN LKE++YM P+G N V +L K+IYGLK+ +R W F++A K+ F+ + + C+Y K + +++LYVDD+++ D
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVY--KKLSGISVTFLVLYVDDILLIGNDR
Query: TMLESVK
T + + K
Subjt: TMLESVK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.0e-19 | 42.45 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVY-KKLSGISVTFLVLYVDDILLIGNDRT
+DVKTAFL+ L+E++YM PEGF+ V +L KS+YGLK+ R W ++FD K +LK + CVY K+ S + L+LYVDD+L++G D+
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVY-KKLSGISVTFLVLYVDDILLIGNDRT
Query: MLESVK
++ +K
Subjt: MLESVK
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.0e-12 | 33.33 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
MDV TAFLN+ + E +Y+ P GF + NP V+ L +YGLK+ WN + K+ F ++E E +Y + + ++ +YVDD+L+ +
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVK
+ VK
Subjt: LESVK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.8e-16 | 36.79 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
+DV AFL L +DVYM+ P GF D P V +L+K++YGLK+ R+W + F+ + + ++ G S+ ++++YVDDIL+ GND T+
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVKD
L + D
Subjt: LESVKD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.4e-15 | 36.79 | Show/hide |
Query: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
+DV AFL L ++VYM+ P GF D P V RL+K+IYGLK+ R+W + F+ + + ++ G S+ ++++YVDDIL+ GND +
Subjt: MDVKTAFLNAFLKEDVYMTHPEGFQDPANPGRVYRLQKSIYGLKKVSRSWNLRFDEAFKQFRFLKNEEEFCVYKKLSGISVTFLVLYVDDILLIGNDRTM
Query: LESVKD
L+ D
Subjt: LESVKD
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