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Sed0020910 (gene) of Chayote v1 genome

Gene IDSed0020910
OrganismSechium edule (Chayote v1)
DescriptionBnaA05g09300D protein
Genome locationLG01:16740295..16743518
RNA-Seq ExpressionSed0020910
SyntenySed0020910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573362.1 hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia]9.9e-3243.78Show/hide
Query:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY
        MNS A L  GIAPTPPLP S  R   +  H+  N       ++RC  +G++I+ C  FN      S + G PL + K+A+QSL+C  L+ AAE ETK I 
Subjt:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY

Query:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK
          K+ AL+ LL  N + A  IM  +    +      +YDA LA+V ILIH G  ESL  AI  L  +E   A    PSD KR  +RAVIYTLLE   EAK
Subjt:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK

Query:  SNWNIYTKAIGSGPPRR
        +NW  ++  IG GP  R
Subjt:  SNWNIYTKAIGSGPPRR

XP_022955331.1 uncharacterized protein LOC111457324 [Cucurbita moschata]5.2e-3344.24Show/hide
Query:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNGGGGQ--SQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY
        MNS A L  GIAPTPPLP S  R   +  H+  N    +  ++RC  +G++I+ C  FN      S + G PL N K A+QSL+C  L+ AAE ETK I 
Subjt:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNGGGGQ--SQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY

Query:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK
          K++ALQ LL  N + A +IM ++    +K     +Y+A LA V ILIH G  ESL DAI  L ++E+       PSD KR  +RAVIYTLL+  +EAK
Subjt:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK

Query:  SNWNIYTKAIGSGPPRR
        +NW  ++  IG GP  R
Subjt:  SNWNIYTKAIGSGPPRR

XP_022994895.1 uncharacterized protein LOC111490483 [Cucurbita maxima]7.8e-3747.2Show/hide
Query:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY
        MNS A L  GIAPT PLP S  R   +  H+  N       ++RC  +G++I+ C R+N+  S  S + G P  N K+A+QSL+CFSL+ AAE ETK I 
Subjt:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY

Query:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK
         +K++ALQ LL  N  EA RIM  +    K     I+Y+A LA+V ILIH G  +SLSDA+  L ++E   A    PSD KR  +RAVIYTLLE   +AK
Subjt:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK

Query:  SNWNIYTKAIGSGP
         NW I++  IGSGP
Subjt:  SNWNIYTKAIGSGP

XP_023542455.1 uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo]3.6e-3446.26Show/hide
Query:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY
        MNS A L  GIAPTPPLP S  R   +  H+  N       ++RC  +G++I+ C  FN      S + G PL N K+A+QSL+C  L+ AAE ETK I 
Subjt:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY

Query:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK
          K++ALQ LL  N + A +IM  L    +      +Y+A LA+V ILIH G  ESL +AIR L ELE   A    PSDAKR  +RAVIYTLLE   +AK
Subjt:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK

Query:  SNWNIYTKAIGSGP
        +NW  ++  IG GP
Subjt:  SNWNIYTKAIGSGP

XP_038895250.1 uncharacterized protein LOC120083532 [Benincasa hispida]5.4e-3845.3Show/hide
Query:  MNSAAFLGHGIAPTPP-LPAS-----RLPLTLR------HV---SFNGGGGQSQRC---KSGLQI-IRCGRFNKTPSFKSASGGG--PLPNAKIALQSLV
        M+S  FL  G +P PP LP +     RLPL+ R      H+     N    + +RC    +G+ I I C  F   P   ++ GGG  P PNAK+ALQSL 
Subjt:  MNSAAFLGHGIAPTPP-LPAS-----RLPLTLR------HV---SFNGGGGQSQRC---KSGLQI-IRCGRFNKTPSFKSASGGG--PLPNAKIALQSLV

Query:  CFSLNTAAEPETKKIYDEKKRALQMLLVGNDNEAVRIMTDLFNHCKKS-PASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRP
        CFS + A EP TK I  EKKRALQ LL  N  +A +IM DL+   +K+    I+YDA LA +Q+LIH+GT ESL DAI++L E+E +      PSDA+  
Subjt:  CFSLNTAAEPETKKIYDEKKRALQMLLVGNDNEAVRIMTDLFNHCKKS-PASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRP

Query:  FFRAVIYTLLEDINEAKSNWNIYTKAIGSGPPRR
         +RA+IYTLL++I +AK+ W  YT  IG+GP  R
Subjt:  FFRAVIYTLLEDINEAKSNWNIYTKAIGSGPPRR

TrEMBL top hitse value%identityAlignment
A0A0A0LXK7 Uncharacterized protein5.7e-1730.08Show/hide
Query:  MNSAAFLGHGIA--PTPPLPASRLPLTLR------------------------HVSFNGGGGQSQRCKSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIA
        M+S A L  G +  P PPLP +     LR                        + ++N   G   +  + + I         PS  +     P+ NA++A
Subjt:  MNSAAFLGHGIA--PTPPLPASRLPLTLR------------------------HVSFNGGGGQSQRCKSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIA

Query:  LQSLVCFSLNTAAEPETKKIYDEKKRALQMLLVGNDNEAVRIMTDL-FNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPS
        L+SL+CFS ++     T  + ++K++AL  LL  N  EA +I+  +   +   S   IQY+A +A++QILIH+GT ESL  A+++  E+  M      PS
Subjt:  LQSLVCFSLNTAAEPETKKIYDEKKRALQMLLVGNDNEAVRIMTDL-FNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPS

Query:  DAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSGP
        DA    + AVI TL+ D      +W  Y   I S P
Subjt:  DAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSGP

A0A1S3BA19 uncharacterized protein LOC1034876769.1e-1537.21Show/hide
Query:  SGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIYDEKKRALQMLLVGNDNE----AVRIMTDLFNHCKKSPAS-IQYDAAL
        +G+  I+CGR ++ P         P PNA++ALQSL+CFS     + +T  I   K  ALQ LL    NE    A  IM  ++   +      IQY+A +
Subjt:  SGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIYDEKKRALQMLLVGNDNE----AVRIMTDLFNHCKKSPAS-IQYDAAL

Query:  ALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSGP
        A +QILIH+GT +S S A   L E+E+       PSDA    ++AVI TLL      K +W+ YT      P
Subjt:  ALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSGP

A0A6J1CHE7 uncharacterized protein LOC1110109065.3e-3143.46Show/hide
Query:  AAFLGHGIAPTPPLPASRLPLTLRHVS-FNGGGGQSQRCKSGLQIIRCGRFNK-TPSFKSASGGGPLPNAKIALQSLVCFSLNT----AAEPETKKIYDE
        A FL  GIAPTPPLP +      R+VS          R      IIRCGR  +   S    SGG PLPN   AL++L+CF++ T    A       I  +
Subjt:  AAFLGHGIAPTPPLPASRLPLTLRHVS-FNGGGGQSQRCKSGLQIIRCGRFNK-TPSFKSASGGGPLPNAKIALQSLVCFSLNT----AAEPETKKIYDE

Query:  KKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSN
        KK ALQ L+  N  EA  IM  ++   K      +YDAALALV+ LIH GT ES   A+  L +LE M     LPSDAK P + A++ TLL+D  EAK +
Subjt:  KKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSN

Query:  WNIYTKAIGSGPPR
        W+ YT  IG+GP R
Subjt:  WNIYTKAIGSGPPR

A0A6J1GTH1 uncharacterized protein LOC1114573242.5e-3344.24Show/hide
Query:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNGGGGQ--SQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY
        MNS A L  GIAPTPPLP S  R   +  H+  N    +  ++RC  +G++I+ C  FN      S + G PL N K A+QSL+C  L+ AAE ETK I 
Subjt:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNGGGGQ--SQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY

Query:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK
          K++ALQ LL  N + A +IM ++    +K     +Y+A LA V ILIH G  ESL DAI  L ++E+       PSD KR  +RAVIYTLL+  +EAK
Subjt:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK

Query:  SNWNIYTKAIGSGPPRR
        +NW  ++  IG GP  R
Subjt:  SNWNIYTKAIGSGPPRR

A0A6J1K2L3 uncharacterized protein LOC1114904833.8e-3747.2Show/hide
Query:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY
        MNS A L  GIAPT PLP S  R   +  H+  N       ++RC  +G++I+ C R+N+  S  S + G P  N K+A+QSL+CFSL+ AAE ETK I 
Subjt:  MNSAAFLGHGIAPTPPLPAS--RLPLTLRHVSFNG--GGGQSQRC-KSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIY

Query:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK
         +K++ALQ LL  N  EA RIM  +    K     I+Y+A LA+V ILIH G  +SLSDA+  L ++E   A    PSD KR  +RAVIYTLLE   +AK
Subjt:  DEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAK

Query:  SNWNIYTKAIGSGP
         NW I++  IGSGP
Subjt:  SNWNIYTKAIGSGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34540.2 unknown protein8.1e-0827.65Show/hide
Query:  TPSFKSASGGGPLPNAKIALQSLVCFSLNTAAE-----------------PETKKIYDEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALA
        T +  + SG  P P AK AL+SL   S   A+                  P    I   K  A++ +  G   EAV+++ D     +  P +  ++  +A
Subjt:  TPSFKSASGGGPLPNAKIALQSLVCFSLNTAAE-----------------PETKKIYDEKKRALQMLLVGNDNEAVRIMTDLFNHCKKSPASIQYDAALA

Query:  LVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSG
        LV+ILI       L +  +   E   +       SD + P ++A+IYT+L+   EAK  W  + K+IG G
Subjt:  LVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCGCCGCCTTCCTCGGCCATGGAATCGCCCCAACGCCGCCGCTCCCGGCGTCGAGACTGCCCTTGACATTGCGCCACGTGTCGTTCAACGGCGGCGGTGGTCA
GAGTCAGCGGTGTAAAAGTGGGTTACAAATAATACGGTGCGGCAGGTTTAACAAAACGCCGTCGTTCAAGTCCGCGAGCGGCGGCGGTCCTTTACCAAACGCCAAAATAG
CGCTGCAGTCCTTGGTCTGCTTCTCTTTAAATACGGCGGCGGAGCCGGAAACTAAAAAAATTTATGATGAGAAGAAAAGAGCGTTACAAATGTTGTTAGTTGGGAACGAT
AATGAGGCCGTGAGGATTATGACGGACCTCTTTAACCATTGCAAAAAATCTCCGGCCTCCATTCAATACGACGCTGCCTTGGCCCTCGTCCAAATTCTCATCCACATTGG
AACGACTGAAAGCTTGAGTGATGCTATTCGCCGTCTGTACGAACTAGAACAGATGGCTGCAGCTGGGATTCTTCCAAGTGATGCAAAGCGTCCCTTTTTCAGAGCTGTTA
TATATACGTTATTAGAAGACATTAATGAAGCAAAAAGTAATTGGAATATTTACACAAAAGCGATAGGCAGTGGTCCACCAAGGCGTTGA
mRNA sequenceShow/hide mRNA sequence
GTCCACTTTTCCCACCCTTTAAAAACCCCATTCTTAATTTTGTTACGCATACCCACCGCGATGAACTCCGCCGCCTTCCTCGGCCATGGAATCGCCCCAACGCCGCCGCT
CCCGGCGTCGAGACTGCCCTTGACATTGCGCCACGTGTCGTTCAACGGCGGCGGTGGTCAGAGTCAGCGGTGTAAAAGTGGGTTACAAATAATACGGTGCGGCAGGTTTA
ACAAAACGCCGTCGTTCAAGTCCGCGAGCGGCGGCGGTCCTTTACCAAACGCCAAAATAGCGCTGCAGTCCTTGGTCTGCTTCTCTTTAAATACGGCGGCGGAGCCGGAA
ACTAAAAAAATTTATGATGAGAAGAAAAGAGCGTTACAAATGTTGTTAGTTGGGAACGATAATGAGGCCGTGAGGATTATGACGGACCTCTTTAACCATTGCAAAAAATC
TCCGGCCTCCATTCAATACGACGCTGCCTTGGCCCTCGTCCAAATTCTCATCCACATTGGAACGACTGAAAGCTTGAGTGATGCTATTCGCCGTCTGTACGAACTAGAAC
AGATGGCTGCAGCTGGGATTCTTCCAAGTGATGCAAAGCGTCCCTTTTTCAGAGCTGTTATATATACGTTATTAGAAGACATTAATGAAGCAAAAAGTAATTGGAATATT
TACACAAAAGCGATAGGCAGTGGTCCACCAAGGCGTTGAAAAAAATTGTATTATCCTTTTCTATGGGGAA
Protein sequenceShow/hide protein sequence
MNSAAFLGHGIAPTPPLPASRLPLTLRHVSFNGGGGQSQRCKSGLQIIRCGRFNKTPSFKSASGGGPLPNAKIALQSLVCFSLNTAAEPETKKIYDEKKRALQMLLVGND
NEAVRIMTDLFNHCKKSPASIQYDAALALVQILIHIGTTESLSDAIRRLYELEQMAAAGILPSDAKRPFFRAVIYTLLEDINEAKSNWNIYTKAIGSGPPRR