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Sed0020928 (gene) of Chayote v1 genome

Gene IDSed0020928
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:25999234..25999986
RNA-Seq ExpressionSed0020928
SyntenySed0020928
Gene Ontology termsNA
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52438.1 hypothetical protein Csa_008032 [Cucumis sativus]2.5e-0440Show/hide
Query:  MAKFSSHLFFLL-LIFSVALMA-AEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYP-QSTSQCVIATPSIFTPVCYCYFDC
        M++ SS  FF++ L+ SVA M   +   A  C +KLY+ GC+ + C+ +C AKYP  S+SQC+   P  F   C C+++C
Subjt:  MAKFSSHLFFLL-LIFSVALMA-AEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYP-QSTSQCVIATPSIFTPVCYCYFDC

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]3.1e-1048.05Show/hide
Query:  MAKFSSHLFFL-LLIFSVALMAAEAGQAAKCVEKLYEGCLPNSCQMKCLAKYPQSTSQCVIATPSIFTPVCYCYFDC
        MAKFS  LFF+   + S A +      A KC  KLY+GCLP  C  KC  KYP S+S+CV   P  F   CYC++DC
Subjt:  MAKFSSHLFFL-LLIFSVALMAAEAGQAAKCVEKLYEGCLPNSCQMKCLAKYPQSTSQCVIATPSIFTPVCYCYFDC

XP_022923678.1 putative defensin-like protein 129 [Cucurbita moschata]2.4e-1051.81Show/hide
Query:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN
        MAKF   L FLLL+ SVALM  EA QA+ C E+LYE GC  ++C+ +C  KY  ST +CV   P+   P    C C+FDCPKN
Subjt:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN

XP_022990690.1 putative defensin-like protein 129 [Cucurbita maxima]6.8e-1050.6Show/hide
Query:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN
        MAKF   L FLLL+ S ALM  EA QA+ C E+LYE GC  ++C+ +C  KY  ST +CV   P+   P    C C+FDCPKN
Subjt:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN

TrEMBL top hitse value%identityAlignment
A0A0A0KS76 Uncharacterized protein1.2e-0440Show/hide
Query:  MAKFSSHLFFLL-LIFSVALMA-AEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYP-QSTSQCVIATPSIFTPVCYCYFDC
        M++ SS  FF++ L+ SVA M   +   A  C +KLY+ GC+ + C+ +C AKYP  S+SQC+   P  F   C C+++C
Subjt:  MAKFSSHLFFLL-LIFSVALMA-AEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYP-QSTSQCVIATPSIFTPVCYCYFDC

A0A0A0KU45 Uncharacterized protein1.5e-1048.05Show/hide
Query:  MAKFSSHLFFL-LLIFSVALMAAEAGQAAKCVEKLYEGCLPNSCQMKCLAKYPQSTSQCVIATPSIFTPVCYCYFDC
        MAKFS  LFF+   + S A +      A KC  KLY+GCLP  C  KC  KYP S+S+CV   P  F   CYC++DC
Subjt:  MAKFSSHLFFL-LLIFSVALMAAEAGQAAKCVEKLYEGCLPNSCQMKCLAKYPQSTSQCVIATPSIFTPVCYCYFDC

A0A6J1EAA9 putative defensin-like protein 1291.1e-1051.81Show/hide
Query:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN
        MAKF   L FLLL+ SVALM  EA QA+ C E+LYE GC  ++C+ +C  KY  ST +CV   P+   P    C C+FDCPKN
Subjt:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN

A0A6J1JQS7 putative defensin-like protein 1293.3e-1050.6Show/hide
Query:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN
        MAKF   L FLLL+ S ALM  EA QA+ C E+LYE GC  ++C+ +C  KY  ST +CV   P+   P    C C+FDCPKN
Subjt:  MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYE-GCLPNSCQMKCLAKYPQSTSQCVIATPSIFTP---VCYCYFDCPKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGTTTTCTTCCCACCTGTTTTTCCTTCTTCTCATTTTCTCAGTTGCATTGATGGCAGCTGAAGCAGGGCAAGCAGCAAAATGTGTGGAGAAGTTGTATGAAGG
ATGCCTACCTAATTCTTGCCAGATGAAGTGCCTAGCCAAGTATCCTCAATCTACATCTCAATGTGTAATTGCCACTCCTTCCATTTTTACCCCTGTTTGCTATTGCTACT
TTGATTGTCCCAAGAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGTTTTCTTCCCACCTGTTTTTCCTTCTTCTCATTTTCTCAGTTGCATTGATGGCAGCTGAAGCAGGGCAAGCAGCAAAATGTGTGGAGAAGTTGTATGAAGG
ATGCCTACCTAATTCTTGCCAGATGAAGTGCCTAGCCAAGTATCCTCAATCTACATCTCAATGTGTAATTGCCACTCCTTCCATTTTTACCCCTGTTTGCTATTGCTACT
TTGATTGTCCCAAGAACAACTAA
Protein sequenceShow/hide protein sequence
MAKFSSHLFFLLLIFSVALMAAEAGQAAKCVEKLYEGCLPNSCQMKCLAKYPQSTSQCVIATPSIFTPVCYCYFDCPKNN