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Sed0020934 (gene) of Chayote v1 genome

Gene IDSed0020934
OrganismSechium edule (Chayote v1)
DescriptionHeavy metal-associated domain containing protein
Genome locationLG04:29944753..29945297
RNA-Seq ExpressionSed0020934
SyntenySed0020934
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574268.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]7.3e-4267.76Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY EQKVTVWGICNK+QVLSTVR+KRKAARFWN++DDD+N+++     E
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
        EE   S+         RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

KAG7013336.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-4368.42Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY EQKVTVWGICNK+QVLSTVR+KRKAARFWN++DDDDN+++    EE
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
        E  +          S RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

XP_022945716.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucurbita moschata]5.6e-4268.42Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY EQKVTVWGICNK+QVLSTVR+KRKAARFWN+DDDD+N++      +
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
         EE+   SR       RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

XP_022968373.1 heavy metal-associated isoprenylated plant protein 28 [Cucurbita maxima]2.9e-4368.42Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY+EQKVTVWGICNK+QVLSTVR+KRKAARFWN DDDD+N+++  +  +
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
         EE+   SR       RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

XP_023542922.1 heavy metal-associated isoprenylated plant protein 36 [Cucurbita pepo subsp. pepo]7.3e-4268.42Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY+EQKVTVWGICNK+QVLSTVR+KRKAARFWN DDDD+N++      +
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
         EE+   SR       RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

TrEMBL top hitse value%identityAlignment
A0A2I4GFL1 uncharacterized protein LOC1090074702.2e-2855.41Show/hide
Query:  MENLQILPV-----AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEEEE
        M ++QI+P      AQ VEMMVPLYS+GC  KI K L SH KGIYSVNVDYN+QKVTVWGICNK+ VL+T+R+KRK ARFWN +D    ++  L  +EEE
Subjt:  MENLQILPV-----AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEEEE

Query:  EDQSQSRLPRNLSIRP------SFALNKFRSLSFKLACKKVFTTARSY
        ED S+  L  +   RP      S      RSLS+KLA KKVFT + S+
Subjt:  EDQSQSRLPRNLSIRP------SFALNKFRSLSFKLACKKVFTTARSY

A0A6J1CHX5 uncharacterized protein LOC1110116616.0e-3467.41Show/hide
Query:  QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEEEEEDQSQSRLP---RNL
        QLVEMMVPLYSHGCANK+HKAL SH KGIYSVNVD N+QKVTVWGICNK+QVLSTVR+KRKAARFWN            H  E+E D S   +P     L
Subjt:  QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEEEEEDQSQSRLP---RNL

Query:  SIRPSFALNKFRSLSFKLACKKV--FTTARSYSFR
        S RP FA+   RSLS KLACKKV   TT RSYSFR
Subjt:  SIRPSFALNKFRSLSFKLACKKV--FTTARSYSFR

A0A6J1G1N8 protein SODIUM POTASSIUM ROOT DEFECTIVE 22.7e-4268.42Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY EQKVTVWGICNK+QVLSTVR+KRKAARFWN+DDDD+N++      +
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
         EE+   SR       RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

A0A6J1HXU2 heavy metal-associated isoprenylated plant protein 281.4e-4368.42Show/hide
Query:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M NLQI+P         QLVEMMVPLYSHGCANKIHKAL SH KGIYSVNVDY+EQKVTVWGICNK+QVLSTVR+KRKAARFWN DDDD+N+++  +  +
Subjt:  MENLQILPV-------AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP
         EE+   SR       RPSF +NK RSLSFKLACKKVFTT RSYS R    P
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLP

M0ZIL1 HMA domain-containing protein1.7e-2856.16Show/hide
Query:  MENLQILPVA-------QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE
        M N+QI+P         Q VEMMVPLYS+GC  KI+ AL SH KGIYSVNVD+ +QKVTVWGICNK+ VL+TVR+KRKAARFWN +D+            
Subjt:  MENLQILPVA-------QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEE

Query:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSF
        EE  ++ S       IRP  AL + RSLS+KLA KK FT  RSYSF
Subjt:  EEEDQSQSRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSYSF

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 451.5e-0536.62Show/hide
Query:  LPVA-QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW
        LP+A  +VE++V +   GC  K+ +A IS   G+ +V +D + QKVTV G  ++ +VL  V+   + A +W
Subjt:  LPVA-QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW

Arabidopsis top hitse value%identityAlignment
AT1G06330.1 Heavy metal transport/detoxification superfamily protein9.9e-0534.85Show/hide
Query:  QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW
        Q +EM V +   GC +++  AL    +G+ +V +D  +QKVTV G  ++ +VL  VR   + A  W
Subjt:  QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW

AT3G56891.1 Heavy metal transport/detoxification superfamily protein1.1e-0636.62Show/hide
Query:  LPVA-QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW
        LP+A  +VE++V +   GC  K+ +A IS   G+ +V +D + QKVTV G  ++ +VL  V+   + A +W
Subjt:  LPVA-QLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW

AT4G08570.1 Heavy metal transport/detoxification superfamily protein2.2e-0440.74Show/hide
Query:  GCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW
        GC  KI K ++S  KG+ SV+VD   QKVTV G  +  +VL   ++ +K    W
Subjt:  GCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFW

AT4G27590.1 Heavy metal transport/detoxification superfamily protein7.8e-2648.73Show/hide
Query:  MENLQILPV-----AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDND----DSQLHV
        M +LQI+PV     AQ VEMMVPLYS+GC  K+ +AL SH KGIYSV VDY  QKVTVWGICNK  VL+ V+ KRK ARFWN +++++N+    D  + V
Subjt:  MENLQILPV-----AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDND----DSQLHV

Query:  EEE-------EEDQSQ-----SRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSY
        +E+       + D+S      S  P   SIRP  +L +  S ++K A KKVFT + S+
Subjt:  EEE-------EEDQSQ-----SRLPRNLSIRPSFALNKFRSLSFKLACKKVFTTARSY

AT4G27590.2 Heavy metal transport/detoxification superfamily protein1.2e-2347.65Show/hide
Query:  MENLQILPV-----AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDND----DSQLHV
        M +LQI+PV     AQ VEMMVPLYS+GC  K+ +AL SH KGIYSV VDY  QKVTVWGICNK  VL+ V+ KRK ARFWN +++++N+    D  + V
Subjt:  MENLQILPV-----AQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDND----DSQLHV

Query:  EEE-------EEDQSQ-----SRLPRNLSIRPSFALNKFRSLSFKLACK
        +E+       + D+S      S  P   SIRP  +L +  S ++K   K
Subjt:  EEE-------EEDQSQ-----SRLPRNLSIRPSFALNKFRSLSFKLACK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATTTGCAAATACTTCCGGTGGCGCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCATCTCCCATCACAA
AGGGATATACTCGGTTAATGTGGATTACAATGAGCAGAAAGTTACCGTGTGGGGAATATGCAACAAACACCAAGTGTTGAGCACTGTCCGAACCAAGAGAAAAGCGGCTC
GTTTTTGGAACGATGATGATGACGATGATAATGATGATTCACAGCTGCACGTCGAAGAAGAAGAAGAAGATCAAAGCCAAAGCCGCCTGCCTCGAAACTTGTCAATTAGG
CCTTCTTTTGCTCTTAACAAGTTCCGTTCTCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACCGCCAGATCCTATTCCTTTCGAAGCATTAAGCTACCCCTGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATTTGCAAATACTTCCGGTGGCGCAGCTGGTGGAGATGATGGTTCCCCTTTATTCTCATGGTTGCGCCAACAAAATCCACAAGGCTCTCATCTCCCATCACAA
AGGGATATACTCGGTTAATGTGGATTACAATGAGCAGAAAGTTACCGTGTGGGGAATATGCAACAAACACCAAGTGTTGAGCACTGTCCGAACCAAGAGAAAAGCGGCTC
GTTTTTGGAACGATGATGATGACGATGATAATGATGATTCACAGCTGCACGTCGAAGAAGAAGAAGAAGATCAAAGCCAAAGCCGCCTGCCTCGAAACTTGTCAATTAGG
CCTTCTTTTGCTCTTAACAAGTTCCGTTCTCTCAGTTTCAAATTAGCCTGCAAGAAGGTTTTCACCACCGCCAGATCCTATTCCTTTCGAAGCATTAAGCTACCCCTGTA
ATTTCCTTGTCGTTTTTGTG
Protein sequenceShow/hide protein sequence
MENLQILPVAQLVEMMVPLYSHGCANKIHKALISHHKGIYSVNVDYNEQKVTVWGICNKHQVLSTVRTKRKAARFWNDDDDDDNDDSQLHVEEEEEDQSQSRLPRNLSIR
PSFALNKFRSLSFKLACKKVFTTARSYSFRSIKLPL