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Sed0020981 (gene) of Chayote v1 genome

Gene IDSed0020981
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:4517926..4518276
RNA-Seq ExpressionSed0020981
SyntenySed0020981
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]5.4e-2160Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN
        MATQK  + SIV++++ AC +S+TKGD+         + +NCVRPCSDTYDD+SCYNDC+REN  AGFCYPKL   +T+KDCCCN
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]4.2e-1363.79Show/hide
Query:  IAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN
        IAKGD     + ++CV+PCSDTYDD+SCYNDC++EN  AGFCYPKL   +T+KDCCC+
Subjt:  IAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1853.49Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN
        MA++K F+   +++++F  F SS KG          DMF+ C+RPC D +DDDSCY+DC+R N  AGFCYPKL  VT EKDCCCNN
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]2.1e-0941.86Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN
        M TQK F  S+++ + F+CF SS +GD         D++ NCV PCS+   D  C   C+ ++  AGFC PKL  ++  K CCCNN
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]2.7e-2058.82Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN
        MATQK  + SIV++++FAC  S+TKGD+         + ++CVRPCSDTYDD+SCYNDC++EN  AGFCYPKL   +T+KDCCCN
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein1.0e-0941.86Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN
        M TQK F  S+++ + F+CF SS +GD         D++ NCV PCS+   D  C   C+ ++  AGFC PKL  ++  K CCCNN
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN

A0A0A0LHG9 Uncharacterized protein1.3e-2058.82Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN
        MATQK  + SIV++++FAC  S+TKGD+         + ++CVRPCSDTYDD+SCYNDC++EN  AGFCYPKL   +T+KDCCCN
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN

A0A0A0LJG5 Uncharacterized protein2.9e-2056.98Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN
        MATQK  + SIV++++F C +S+TKGD+         + ++CVRPC DTYDD+SCYNDC+REN  AGFCYPKL   +T+KDCCCN+
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN

A0A0A0LKF5 Uncharacterized protein4.1e-1468.42Show/hide
Query:  AKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN
        AKGD     + ++CVRPCSDTYDD+SCYNDC+REN  AGFCYPKL   +T+KDCCCN
Subjt:  AKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCN

A0A5A7TJH1 Uncharacterized protein4.5e-0536.9Show/hide
Query:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCC
        M T+K     + I ++ ACF++ ++G              NC+RPCS+TY   SCY DC   N   G C PK   V+ E  CCC
Subjt:  MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCCAGAAGTTTTTTAGTGCATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAACAAAAGGAGATATTGCAAAAGGAGATACATCAAAAACAGA
TATGTTCCTCAACTGTGTTCGACCATGTTCCGACACTTACGACGATGATTCATGCTATAACGATTGTCTTCGAGAGAACAACAATGCTGGATTTTGTTATCCCAAGCTAT
CTGATGTTACGACTGAAAAAGATTGTTGTTGCAATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCCAGAAGTTTTTTAGTGCATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAACAAAAGGAGATATTGCAAAAGGAGATACATCAAAAACAGA
TATGTTCCTCAACTGTGTTCGACCATGTTCCGACACTTACGACGATGATTCATGCTATAACGATTGTCTTCGAGAGAACAACAATGCTGGATTTTGTTATCCCAAGCTAT
CTGATGTTACGACTGAAAAAGATTGTTGTTGCAATAATTAA
Protein sequenceShow/hide protein sequence
MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN