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Sed0020995 (gene) of Chayote v1 genome

Gene IDSed0020995
OrganismSechium edule (Chayote v1)
Descriptiontwo-component response regulator ARR11-like
Genome locationLG09:36844887..36846353
RNA-Seq ExpressionSed0020995
SyntenySed0020995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023004880.1 two-component response regulator ARR11-like [Cucurbita maxima]1.7e-0432.49Show/hide
Query:  SVKKRVGKIDDHWTKE--RKECFLYCFYRLPISKPFISTNPNSQFPLQNHSISTNPNPQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVD
        S  K  GK+    TK   RK+          ++   IST PN+  P Q+HSIS NPN Q       +Q  P+ NQ  SQ   T+L + D V   S  + D
Subjt:  SVKKRVGKIDDHWTKE--RKECFLYCFYRLPISKPFISTNPNSQFPLQNHSISTNPNPQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVD

Query:  QNNVAIHGGGANNYSNMVNVFESQGSPCRVIEQSANNLPSDFSLSATHFADPIIPNNDHNQLVSNFD----GDD--MDLDPMILGKFFGDFSAEDYS
          N          YSN +NVF+  G         ++N  S F +   +FA P++ N  H  ++SN D    G+D      PM +G  FG  S  +YS
Subjt:  QNNVAIHGGGANNYSNMVNVFESQGSPCRVIEQSANNLPSDFSLSATHFADPIIPNNDHNQLVSNFD----GDD--MDLDPMILGKFFGDFSAEDYS
XP_038896348.1 two-component response regulator ORR25-like [Benincasa hispida]3.8e-0433.57Show/hide
Query:  STNPNSQFPLQNHSISTNPN--PQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVDQNNVAIHGGGANNYSNMVNVFESQGSP--CRVIEQ
        STNPNSQ  LQNH  STNPN  P L      I    L ++       TN +    +  +   + + NN+ ++ GG+N YSNM+NV E Q +P     I Q
Subjt:  STNPNSQFPLQNHSISTNPN--PQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVDQNNVAIHGGGANNYSNMVNVFESQGSP--CRVIEQ

Query:  SANNLPSDFSLSATHFADPIIPNNDHNQLVSNFDGDDMDL
        S+    +D + S   +  P   N      +SN DG+ + +
Subjt:  SANNLPSDFSLSATHFADPIIPNNDHNQLVSNFDGDDMDL
TrEMBL top hitse value%identityAlignment
A0A6J1KVU3 two-component response regulator ARR11-like8.2e-0532.49Show/hide
Query:  SVKKRVGKIDDHWTKE--RKECFLYCFYRLPISKPFISTNPNSQFPLQNHSISTNPNPQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVD
        S  K  GK+    TK   RK+          ++   IST PN+  P Q+HSIS NPN Q       +Q  P+ NQ  SQ   T+L + D V   S  + D
Subjt:  SVKKRVGKIDDHWTKE--RKECFLYCFYRLPISKPFISTNPNSQFPLQNHSISTNPNPQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVD

Query:  QNNVAIHGGGANNYSNMVNVFESQGSPCRVIEQSANNLPSDFSLSATHFADPIIPNNDHNQLVSNFD----GDD--MDLDPMILGKFFGDFSAEDYS
          N          YSN +NVF+  G         ++N  S F +   +FA P++ N  H  ++SN D    G+D      PM +G  FG  S  +YS
Subjt:  QNNVAIHGGGANNYSNMVNVFESQGSPCRVIEQSANNLPSDFSLSATHFADPIIPNNDHNQLVSNFD----GDD--MDLDPMILGKFFGDFSAEDYS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCTCCTAATTCTAACCATGAAGAAGTCCCATTGGATAATCAAGCTTCAAAATTTGATTCACCAAATAGTTGTTCCTCTAGCAATGTCAACTTCAACTCCACTGG
TGTTTCGGGGTCGACCTCGGGCTCCACCGAAGTCAATTCTGTCGACGTTTCTCACAAAATCGTCAAACGGGCCAGACGAACCAGTTATTCGAAGCCTAAATCTGTCAAGA
AGAGGGTAGGAAAGATAGATGATCATTGGACAAAAGAAAGAAAAGAATGTTTTCTTTATTGTTTCTACAGACTCCCTATTAGCAAGCCATTCATTTCCACTAACCCTAAT
TCCCAATTTCCCCTTCAAAACCATTCCATTTCAACTAACCCTAATCCTCAACTTGATACTCTTCAAAGAGCCATTCAACATTTACCACTGCTAAATCAAACGCTTTCCCA
ATGCCATCCTACAAATCTTTCAAAACACGACAAGGTGGAGTTTCGGAGTTTTACGAACGTCGATCAAAACAATGTTGCTATTCATGGAGGAGGAGCCAACAATTACTCAA
ATATGGTGAATGTTTTTGAAAGCCAAGGAAGCCCATGTAGAGTAATAGAGCAATCAGCAAATAATTTACCTTCAGATTTCTCTCTCAGTGCTACTCATTTTGCTGATCCT
ATAATTCCAAACAATGATCATAATCAATTGGTCTCTAACTTTGATGGTGATGACATGGACTTAGATCCTATGATATTGGGCAAATTTTTTGGAGATTTTAGTGCTGAAGA
TTACTCTCTTTTTGATGATCCGCCAAACTCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCTCCTAATTCTAACCATGAAGAAGTCCCATTGGATAATCAAGCTTCAAAATTTGATTCACCAAATAGTTGTTCCTCTAGCAATGTCAACTTCAACTCCACTGG
TGTTTCGGGGTCGACCTCGGGCTCCACCGAAGTCAATTCTGTCGACGTTTCTCACAAAATCGTCAAACGGGCCAGACGAACCAGTTATTCGAAGCCTAAATCTGTCAAGA
AGAGGGTAGGAAAGATAGATGATCATTGGACAAAAGAAAGAAAAGAATGTTTTCTTTATTGTTTCTACAGACTCCCTATTAGCAAGCCATTCATTTCCACTAACCCTAAT
TCCCAATTTCCCCTTCAAAACCATTCCATTTCAACTAACCCTAATCCTCAACTTGATACTCTTCAAAGAGCCATTCAACATTTACCACTGCTAAATCAAACGCTTTCCCA
ATGCCATCCTACAAATCTTTCAAAACACGACAAGGTGGAGTTTCGGAGTTTTACGAACGTCGATCAAAACAATGTTGCTATTCATGGAGGAGGAGCCAACAATTACTCAA
ATATGGTGAATGTTTTTGAAAGCCAAGGAAGCCCATGTAGAGTAATAGAGCAATCAGCAAATAATTTACCTTCAGATTTCTCTCTCAGTGCTACTCATTTTGCTGATCCT
ATAATTCCAAACAATGATCATAATCAATTGGTCTCTAACTTTGATGGTGATGACATGGACTTAGATCCTATGATATTGGGCAAATTTTTTGGAGATTTTAGTGCTGAAGA
TTACTCTCTTTTTGATGATCCGCCAAACTCATTGTAG
Protein sequenceShow/hide protein sequence
MSAPNSNHEEVPLDNQASKFDSPNSCSSSNVNFNSTGVSGSTSGSTEVNSVDVSHKIVKRARRTSYSKPKSVKKRVGKIDDHWTKERKECFLYCFYRLPISKPFISTNPN
SQFPLQNHSISTNPNPQLDTLQRAIQHLPLLNQTLSQCHPTNLSKHDKVEFRSFTNVDQNNVAIHGGGANNYSNMVNVFESQGSPCRVIEQSANNLPSDFSLSATHFADP
IIPNNDHNQLVSNFDGDDMDLDPMILGKFFGDFSAEDYSLFDDPPNSL