CuGenDBv2

Gene ID	Sed0021009
Organism	Sechium edule (Chayote v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome location	LG04:31673638..31676178
RNA-Seq Expression	Sed0021009
Synteny	Sed0021009
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]

4.9e-37

87.13

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASACQRIASRISQSSFRT +R N  AKS SSPF LPSKS++PSV RFSLAR P ELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSP 
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

XP_008448835.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis melo]

4.1e-36

86.14

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASACQRIASRISQSSFRT +R N  AKS SS F LPSKS++PSV RFSLAR P ELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSP 
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

XP_022154046.1 uncharacterized protein LOC111021400 isoform X1 [Momordica charantia]

2.7e-35

83.17

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASAC RIASRISQSSFR  +R   P KSPSSPF LPSKS++PSV RFSLAR P ELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSP 
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

XP_023551885.1 uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo]

2.7e-35

82.18

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASAC+RIASRISQSSFRT++R N P K+ SSPFTLP  S++PSV RFSLA+ P ELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPS
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

XP_038903086.1 protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]

2.7e-35

83.17

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASACQRIASRISQSSFRT +R N  AKS SSPF LP+KS++PSV RFSLAR P ELGC+QSLLPFH+AVAGARMISCLSTNSRSCRALSQGILCCT P 
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKM3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1

2.0e-36

86.14

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASACQRIASRISQSSFRT +R N  AKS SS F LPSKS++PSV RFSLAR P ELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSP 
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1DMJ3 uncharacterized protein LOC111021400 isoform X1

1.3e-35

83.17

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASAC RIASRISQSSFR  +R   P KSPSSPF LPSKS++PSV RFSLAR P ELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSP 
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1EAY8 uncharacterized protein LOC111430946 isoform X1

1.1e-34

81.19

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASAC+RIASRISQSS RT++R N P K+ SSPFTLP   ++PSV RFSLAR P ELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPS
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1HN90 uncharacterized protein LOC111465140 isoform X1

7.1e-34

80.2

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS
        MASAC+RIASRISQSS RT++R N P K+ SSPFTLP   ++PSV RFSLA  P ELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQG LCCTSPS
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1L2N2 uncharacterized protein LOC111498548 isoform X2

2.7e-33

87.91

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASR+SQSSFRT+LR N P KSPSS F+LPSKSS+PSVSRFSLAR P ELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

SwissProt top hits

e value

%identity

Alignment

Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial

1.4e-07

42.16

Show/hide

Query:  MASACQRIASRISQSSFRTIL-RPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSP
        MAS C R  S+ + S+FR+ + +P+   KS SS   +P    SP  S     RP  +LG +QSLLP + AVA AR+ SCL  +S++ R+L+QG+LC  +P
Subjt:  MASACQRIASRISQSSFRTIL-RPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSP

Query:  SL
         +
Subjt:  SL

Arabidopsis top hits

e value

%identity

Alignment

AT4G17310.1 unknown protein

9.8e-20

55.34

Show/hide

Query:  MASACQRIASRISQSSFRTILRPNFPAKSPSSP--FTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS
        MASAC+++ +R S SS ++ LR    + S +S   F LPS+ +      FS +R P ELGCVQSLLP H  VA AR+ SCLST SRS RALSQG LCCTS
Subjt:  MASACQRIASRISQSSFRTILRPNFPAKSPSSP--FTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTS

Query:  PSL
        P L
Subjt:  PSL

AT5G47455.1 unknown protein

1.7e-16

51.04

Show/hide

Query:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R +F          PA + S+ F +PSK ++  + RFS +R P ELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.5 unknown protein

8.6e-16

50.53

Show/hide

Query:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        R  SR S SSF++ +R +F          PA + S+ F +PSK ++  + RFS +R P ELGCVQSLLP H  VA AR+ SCLST SRS RAL+Q
Subjt:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

AT5G47455.6 unknown protein

1.7e-16

51.04

Show/hide

Query:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R +F          PA + S+ F +PSK ++  + RFS +R P ELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

AT5G47455.7 unknown protein

1.7e-16

51.04

Show/hide

Query:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG
        R  SR S SSF++ +R +F          PA + S+ F +PSK ++  + RFS +R P ELGCVQSLLP H  VA AR+ SCLST SRS RAL+QG
Subjt:  RIASRISQSSFRTILRPNF----------PAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCGCTTGTCAAAGAATTGCGAGCAGAATCTCCCAATCGTCCTTCAGAACAATTCTCCGGCCAAATTTTCCGGCCAAATCTCCATCTTCTCCGTTCACGTTACC
GTCCAAATCATCTTCACCGTCCGTTAGCCGATTCTCGCTCGCCAGGCCTCCGCCGGAGCTAGGATGCGTTCAGTCTCTTTTGCCTTTTCACGACGCGGTTGCTGGAGCAA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTATTCTCTGCTGCACCTCTCCCAGCCTCTAA

mRNA sequence

Show/hide mRNA sequence

CCCTCAACCCCTTCATCGTTTCCGGTAGAATTTCCAGATCTCCCTTTCTTCTTTTATGGCTTCCGCTTGTCAAAGAATTGCGAGCAGAATCTCCCAATCGTCCTTCAGAA
CAATTCTCCGGCCAAATTTTCCGGCCAAATCTCCATCTTCTCCGTTCACGTTACCGTCCAAATCATCTTCACCGTCCGTTAGCCGATTCTCGCTCGCCAGGCCTCCGCCG
GAGCTAGGATGCGTTCAGTCTCTTTTGCCTTTTCACGACGCGGTTGCTGGAGCAAGAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGG
TATTCTCTGCTGCACCTCTCCCAGCCTCTAACATGAAATATTGTACTTTTTTTCAAGTAGCTAGGTTTATCCGTTCCAAGGTGACTTCTCTGGGCAGTTCACTGCAGTGG
CAAAGGGATATCAACAATGGATTAGTGGATTTCTTTCAAGTACTGTGACCTGCTTAATTTGTTTAACTAGTTTTGATTATTCCATTTGACAGAATATATCGAATAATATT
ATAGTGCTAGTTTTCATGGCAACTCAGAAAATCATATTTTTCGCCATTGTTGTGCCATAATCCTTTTATCTGTGTCTTACGATGGATATGTACGTTTTTCTTATTTATTG
AGATACACATTCTATTTTGTTTTGCTTTTTTGTTATAATATAATACATCGTGTAGACAAATGAGGGCTGTTTTGGTTACCCCCAGGACAAGCAAGCAG

Protein sequence

Show/hide protein sequence

MASACQRIASRISQSSFRTILRPNFPAKSPSSPFTLPSKSSSPSVSRFSLARPPPELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQGILCCTSPSL

Sed0021009 (gene) of Chayote v1 genome