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Sed0021032 (gene) of Chayote v1 genome

Gene IDSed0021032
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:71349596..71350018
RNA-Seq ExpressionSed0021032
SyntenySed0021032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025373.1 hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa]4.8e-2363.74Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
        MKIQ  FF AIL+ LA+ H L+ CR MK D + W+ LI QQSLQRAPVPPS RDGD+NIPVPLGQ+AFAGK T PP++  P++L   S VA
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2056.04Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
        MKIQ  F LAIL+ LA+ H+L+ CR MK D Q W+ L+LQQSLQRAPVPPSA++G + IPVPLGQR+F GK T  P++++ + +     VA
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2054.95Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
        MKIQ  F LAIL+ LA+ H+L+ CR MK D Q W+ L+LQQSLQRAPVPP+A++G + IP PLGQRAF GK T  P++++ + +     VA
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]5.4e-1954.95Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
        MKIQ  F LAI++ LA+ H+L+ CR MK D Q W +++LQQSLQRAPVPPSA++G + IPVPLGQRAF GK T  P++++ + +     VA
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
KAG6571506.1 hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2362.64Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
        MKIQ  F LAI + LA+ H+L+ CR MK D Q W +++LQQSLQRAPVPPS +DG + IPVPLG+RAFAGKF APP+ A+P+HL   S VA
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
TrEMBL top hitse value%identityAlignment
A0A061DNY2 Uncharacterized protein2.8e-0541.57Show/hide
Query:  FLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLG-----QRAFAGKFTAPPSYAFPNHLSFSSAVA
        F+  + FL STH  E  R +  D      +++ QSLQ+ PVPPS R+G +NIP   G      RAFAG   APP    P+H+S   A A
Subjt:  FLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLG-----QRAFAGKFTAPPSYAFPNHLSFSSAVA
A0A0A0LCY5 Uncharacterized protein3.4e-1965.79Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWT--TLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTA
        MKIQ  F LAIL+ LA+TH L+ CR +K D QNW+    +LQQSLQR PVPPSA++GD+NIPVP+GQRAFAGK +A
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWT--TLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTA
A0A5D3B777 Uncharacterized protein2.3e-2363.74Show/hide
Query:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
        MKIQ  FF AIL+ LA+ H L+ CR MK D + W+ LI QQSLQRAPVPPS RDGD+NIPVPLGQ+AFAGK T PP++  P++L   S VA
Subjt:  MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAAGTTGGTTTCTTTTTAGCCATTCTTATTTTCCTTGCCAGCACTCATGAGCTTGAAGGTTGCAGAGCAATGAAGCATGATCTACAAAACTGGACTACGCT
GATTCTTCAGCAGTCGTTGCAAAGGGCTCCGGTTCCTCCCTCCGCCCGAGACGGCGACTCTAATATCCCGGTGCCGCTCGGCCAAAGGGCCTTTGCCGGAAAATTCACGG
CGCCGCCGTCATACGCCTTTCCAAATCATCTTTCATTTTCTTCTGCCGTCGCATTTTAA
mRNA sequenceShow/hide mRNA sequence
GCAACTTCTTAAAATATCACTTAACAATCAACAATCTCCATTTTTTTTATCCTTGCTAATTAAAAACCCTTGTTTTTTTTAATTTGCTCTAAAAATGAAGATCCAAGTTG
GTTTCTTTTTAGCCATTCTTATTTTCCTTGCCAGCACTCATGAGCTTGAAGGTTGCAGAGCAATGAAGCATGATCTACAAAACTGGACTACGCTGATTCTTCAGCAGTCG
TTGCAAAGGGCTCCGGTTCCTCCCTCCGCCCGAGACGGCGACTCTAATATCCCGGTGCCGCTCGGCCAAAGGGCCTTTGCCGGAAAATTCACGGCGCCGCCGTCATACGC
CTTTCCAAATCATCTTTCATTTTCTTCTGCCGTCGCATTTTAATTGTCTTTTATGGATGAATAATTGAGGTGAACTTTTGTCGATAACTACCC
Protein sequenceShow/hide protein sequence
MKIQVGFFLAILIFLASTHELEGCRAMKHDLQNWTTLILQQSLQRAPVPPSARDGDSNIPVPLGQRAFAGKFTAPPSYAFPNHLSFSSAVAF