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Sed0021033 (gene) of Chayote v1 genome

Gene IDSed0021033
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:15792241..15800093
RNA-Seq ExpressionSed0021033
SyntenySed0021033
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455709.1 PREDICTED: uncharacterized protein LOC103495817 [Cucumis melo]1.0e-2089.47Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
        MPHRTRPM ALLVFTGLNVVL+STITPVYDFVCFHPYWERRRERR+QQREAA+ K L
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
XP_022153946.1 uncharacterized protein LOC111021335 [Momordica charantia]4.7e-2192.86Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRERR+QQREAA+ KS
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
XP_022931821.1 uncharacterized protein LOC111438118 [Cucurbita moschata]6.1e-2192.86Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRE RR+QREAAI KS
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
XP_031740521.1 uncharacterized protein LOC101220293 [Cucumis sativus]9.5e-2292.98Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRERRRQQREAA+ K L
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
XP_038882345.1 uncharacterized protein LOC120073600 [Benincasa hispida]2.1e-2192.98Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRERRRQQREAA  K L
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
TrEMBL top hitse value%identityAlignment
A0A1S3C1N0 uncharacterized protein LOC1034958175.1e-2189.47Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
        MPHRTRPM ALLVFTGLNVVL+STITPVYDFVCFHPYWERRRERR+QQREAA+ K L
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL
A0A6J1DM83 uncharacterized protein LOC1110213352.3e-2192.86Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRERR+QQREAA+ KS
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
A0A6J1EUP9 uncharacterized protein LOC1114381183.0e-2192.86Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRE RR+QREAAI KS
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
A0A6J1HS71 uncharacterized protein LOC1114662687.3e-2090.91Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAK
        MPHRTRPMTALLVFTGLNVVL+STITPVYDFVCFHPYWERRRE  R+QREAAI K
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAK
A0A6P3YS46 uncharacterized protein LOC1074039602.5e-2087.5Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
        MPHRTRPMTALLVFTGLNV+L+STITPVYDFVCFHPYWERRRE+RRQ+REAA A++
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09225.1 unknown protein3.6e-1977.78Show/hide
Query:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIA
        MPHRTRP+  LL+FTG+N VL+ TITPVYDFVCF PYWERRRER RQ+REAA A
Subjt:  MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACACCGAACACGGCCTATGACTGCGCTTCTTGTATTTACTGGTCTCAATGTGGTGCTGTTATCAACCATTACTCCAGTGTATGATTTTGTATGCTTTCATCCATA
CTGGGAAAGAAGGAGAGAACGTCGTCGGCAGCAACGCGAAGCGGCTATAGCAAAGAGCTTGTAG
mRNA sequenceShow/hide mRNA sequence
AGTCTTCAGGTCGCCCAATCGCAGATTCTTCTTCATAAGAATTTCTGGAATCATTTTCAAGACTCTGATTCAAGGCTTGTTAGAGGTTTAAAATTTTGATTAAAAACTAT
GCCACACCGAACACGGCCTATGACTGCGCTTCTTGTATTTACTGGTCTCAATGTGGTGCTGTTATCAACCATTACTCCAGTGTATGATTTTGTATGCTTTCATCCATACT
GGGAAAGAAGGAGAGAACGTCGTCGGCAGCAACGCGAAGCGGCTATAGCAAAGAGCTTGTAGACAGAATCCCCATCTCTACAATGCCTGTCGGATTGTACATTGCATCTA
AGTTCCCCACACACTGATCTTTTTTGGTAAGATTTTTCTTTTGTCCTTTCTATCATTCAAGATGAAGATAAGAATGGGATAAGAAAGCCTTTGCTTGCCAACTGCAGGGT
TTATTGTCCACTAATTGTGGAAAAGACTCTGAACTGGACCATTAGAATTCACAAGCTGTCATGATGATTGATATGACATAATCAACCTACCTTCTCTTCTATGTTTTCTT
TTTTGATTTTGTTACTATCTGCTTTGGTTCATCAATTTGCTCTGCCACTGATACTGATAGTCTACACTAAGTCTCTATGTTCTTGCACATGTTCTCTTGGCTAAACATGT
CTCACAGTGATGTTTTTACTGTCGGATCACTATATTACATTTCATTTTGTTAAAATGAACTTAGTTTAATTGGCATAAAACTACAGCCTCAAAGTTA
Protein sequenceShow/hide protein sequence
MPHRTRPMTALLVFTGLNVVLLSTITPVYDFVCFHPYWERRRERRRQQREAAIAKSL