; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0021040 (gene) of Chayote v1 genome

Gene IDSed0021040
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor TCP24
Genome locationLG01:17339961..17340593
RNA-Seq ExpressionSed0021040
SyntenySed0021040
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584403.1 Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5159.64Show/hide
Query:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID
        ++QEG   +AKQME KRK+  SRQGP  +RGNPRIF+ + LFGGKDRHSKV T+KGLRDRRIRLS PTAIQ+YDLQNRLGL+QPSKVIDWLI VT F+ID
Subjt:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID

Query:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS
        KLPPLHF   FDPN S LH            DAA +AK+EET  +L+QKLSP  NH S SAL         N   F   SF  PLM+   A+ +SFSS S
Subjt:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS

Query:  --LLFCPVTRLSEVSPDLRYSGN
          LLF P+T   EVS  L   GN
Subjt:  --LLFCPVTRLSEVSPDLRYSGN

KAG7019990.1 Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-5159.19Show/hide
Query:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID
        ++QEG   +AKQME KRK+  SRQGP  +RGNPRIF+ + LFGGKDRHSKV T+KGLRDRRIRLS PTAIQ+YDLQNRLGL++PSKVIDWLI VT F+ID
Subjt:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID

Query:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS
        KLPPLHF   FDPN S LH            DAA +AK+EET  +L+QKLSP  NH S SAL         N   F   SF  PLM+   A+ +SFSS S
Subjt:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS

Query:  --LLFCPVTRLSEVSPDLRYSGN
          LLF P+T   EVS  L   GN
Subjt:  --LLFCPVTRLSEVSPDLRYSGN

XP_022137286.1 transcription factor TCP24 [Momordica charantia]5.3e-6268.32Show/hide
Query:  MEAK-RKRASSRQ-GPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNY
        MEAK R RASSRQ GPCL RGNPRIF+ + LFGGKDRHSKV+TIKGLRDRRIRLSTPTAIQ+YDLQN+LGL QPSKVIDWLI VT F+IDKLPPL     
Subjt:  MEAK-RKRASSRQ-GPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNY

Query:  FDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHD-----FQVSSFSSPLMEAHLASVSSFSSASLLFCPVTRLSEV
        FDPN S+L+QSS ++ Q+CHFD AV+A+N  TER+L QKLSP  NH S+ +L  NA D     F+ SSF  P MEA+  S SS +SA LLFCP+T  SEV
Subjt:  FDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHD-----FQVSSFSSPLMEAHLASVSSFSSASLLFCPVTRLSEV

Query:  SP
        SP
Subjt:  SP

XP_023001048.1 transcription factor TCP13-like [Cucurbita maxima]1.2e-5058.85Show/hide
Query:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID
        ++QEG   +AKQME KRK+  SRQGP  +RGNPRIF+ + LFGGKDRHSKV T+KGLRDRRIRLS PTAIQ+YDLQNRLGL+QPSKVIDWL+ VT F+ID
Subjt:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID

Query:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHF---DAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFS
        KLPPLHF   FDPN S LH          HF   DAA +AK+EET  +L+QK SP  NH S SAL         N   F   SF  PLM+   A+ +SFS
Subjt:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHF---DAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFS

Query:  SAS--LLFCPVTRLSEVSPDLRYSGN
        S S  LLF P+T   EVS  L   GN
Subjt:  SAS--LLFCPVTRLSEVSPDLRYSGN

XP_023519980.1 transcription factor TCP13-like [Cucurbita pepo subsp. pepo]4.2e-5159.19Show/hide
Query:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID
        ++QEG   +AKQME KRK+  SRQGP  +RGNPRIF+ + LFGGKDRHSKV T+KGLRDRRIRLS PTAIQ+YDLQNRLGL+QPSKVIDWLI VT F+ID
Subjt:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID

Query:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS
        KLPPLHF   FDPN S LH            DA  +AK+EET  +L+QKLSP  NH S SAL         N   F   SF  PLM+   A+ +SFSS S
Subjt:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS

Query:  --LLFCPVTRLSEVSPDLRYSGN
          LLF P+T   EVS  L   GN
Subjt:  --LLFCPVTRLSEVSPDLRYSGN

TrEMBL top hitse value%identityAlignment
A0A1S3BEN2 transcription factor TCP51.6e-4060.23Show/hide
Query:  KAKQMEAKRKRA--SSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLH
        +AKQME KRK+A   SRQG   +RGNPRIF+ +  FGGKDRHSKV TIKGLRDRRIRLS PTAIQ+YDLQN+LGL+QPSKVIDWLI VT FEIDKLPPLH
Subjt:  KAKQMEAKRKRA--SSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLH

Query:  FQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSP
        F   FDPN SILH      S I    A ++AKNEET++ L+ + +      S    P     F   + SSP
Subjt:  FQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSP

A0A5D3BIQ9 Transcription factor TCP51.6e-4060.23Show/hide
Query:  KAKQMEAKRKRA--SSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLH
        +AKQME KRK+A   SRQG   +RGNPRIF+ +  FGGKDRHSKV TIKGLRDRRIRLS PTAIQ+YDLQN+LGL+QPSKVIDWLI VT FEIDKLPPLH
Subjt:  KAKQMEAKRKRA--SSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLH

Query:  FQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSP
        F   FDPN SILH      S I    A ++AKNEET++ L+ + +      S    P     F   + SSP
Subjt:  FQNYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSP

A0A6J1C656 transcription factor TCP242.6e-6268.32Show/hide
Query:  MEAK-RKRASSRQ-GPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNY
        MEAK R RASSRQ GPCL RGNPRIF+ + LFGGKDRHSKV+TIKGLRDRRIRLSTPTAIQ+YDLQN+LGL QPSKVIDWLI VT F+IDKLPPL     
Subjt:  MEAK-RKRASSRQ-GPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNY

Query:  FDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHD-----FQVSSFSSPLMEAHLASVSSFSSASLLFCPVTRLSEV
        FDPN S+L+QSS ++ Q+CHFD AV+A+N  TER+L QKLSP  NH S+ +L  NA D     F+ SSF  P MEA+  S SS +SA LLFCP+T  SEV
Subjt:  FDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHD-----FQVSSFSSPLMEAHLASVSSFSSASLLFCPVTRLSEV

Query:  SP
        SP
Subjt:  SP

A0A6J1E7C6 transcription factor PCF8-like1.7e-5060Show/hide
Query:  KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ
        +AKQME KRK+  SRQGP  +RGNPRIF+ + LFGGKDRHSKV T+KGLRDRRIRLS PTAIQ+YDLQNRLGL+QPSKVIDWLI VT  +IDKLPPLHF 
Subjt:  KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ

Query:  NYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS--LLFCPV
          FDPN S LH        +   DAA +AK+EET  +L+QKLSP  N+ S SAL         N   F   SF  PLM+   A+ +SFSS S  LLF P+
Subjt:  NYFDPNDSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFSSAS--LLFCPV

Query:  TRLSEVSPDLRYSGN
        T   EVS  LR  GN
Subjt:  TRLSEVSPDLRYSGN

A0A6J1KPD9 transcription factor TCP13-like6.0e-5158.85Show/hide
Query:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID
        ++QEG   +AKQME KRK+  SRQGP  +RGNPRIF+ + LFGGKDRHSKV T+KGLRDRRIRLS PTAIQ+YDLQNRLGL+QPSKVIDWL+ VT F+ID
Subjt:  MRQEG---KAKQMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEID

Query:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHF---DAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFS
        KLPPLHF   FDPN S LH          HF   DAA +AK+EET  +L+QK SP  NH S SAL         N   F   SF  PLM+   A+ +SFS
Subjt:  KLPPLHFQNYFDPNDSILHQSSFIVSQICHF---DAAVEAKNEETERVLVQKLSPFTNHDSVSAL-------PRNAHDFQVSSFSSPLMEAHLASVSSFS

Query:  SAS--LLFCPVTRLSEVSPDLRYSGN
        S S  LLF P+T   EVS  L   GN
Subjt:  SAS--LLFCPVTRLSEVSPDLRYSGN

SwissProt top hitse value%identityAlignment
A2XMN1 Transcription factor PCF66.8e-2044.22Show/hide
Query:  RIFKAHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAA
        RI++    GGKDRHSKVYT KG+RDRR+RLS  TAIQ YDLQ+RLG  QPSK I+WLI   S  ID LP L      DP       ++F  + I H  AA
Subjt:  RIFKAHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYFDPNDSILHQSSFIVSQICHFDAA

Query:  VEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSPLMEA
          A      +   Q+LS  +   S S   + + D +V+  S+P   A
Subjt:  VEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSPLMEA

Q10CE8 Transcription factor PCF65.2e-2066.2Show/hide
Query:  RIFKAHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPL
        RI++    GGKDRHSKVYT KG+RDRR+RLS  TAIQ YDLQ+RLG  QPSK I+WLI   S  ID LP L
Subjt:  RIFKAHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPL

Q9FME3 Transcription factor TCP56.4e-2660.4Show/hide
Query:  QMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF
        Q +     +SSRQ     R NPRI + +  FGGKDRHSKV T++GLRDRRIRLS PTAIQ+YDLQ+RLGL+QPSKVIDWL++    ++DKLPPL F + F
Subjt:  QMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF

Query:  D
        +
Subjt:  D

Q9LEZ9 Transcription factor TCP171.0e-2362.37Show/hide
Query:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF---DPNDSILHQS
        NPRI + +  FGGKDRHSKV T++GLRDRRIRLS  TAIQ+YDLQ RLGL+QPSKVIDWL++V   ++D LPPL F   F   +PN + L +S
Subjt:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF---DPNDSILHQS

Q9S7W5 Transcription factor TCP133.3e-2238.1Show/hide
Query:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ----NYFDPNDSILH--------
        +PRI + +  FGGKDRHSKV T++GLRDRR+RLS PTAIQ+YDLQ RLG+ QPSK +DWL+     EID+LPPL       + F+ + S L+        
Subjt:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ----NYFDPNDSILH--------

Query:  --QSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSA------LPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVT
          Q  F ++       +     EE +R   +    +TN+  V +      L  + H  Q  S  +      L S+  F S  +L CP+T
Subjt:  --QSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSA------LPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVT

Arabidopsis top hitse value%identityAlignment
AT3G02150.1 plastid transcription factor 12.3e-2338.1Show/hide
Query:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ----NYFDPNDSILH--------
        +PRI + +  FGGKDRHSKV T++GLRDRR+RLS PTAIQ+YDLQ RLG+ QPSK +DWL+     EID+LPPL       + F+ + S L+        
Subjt:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ----NYFDPNDSILH--------

Query:  --QSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSA------LPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVT
          Q  F ++       +     EE +R   +    +TN+  V +      L  + H  Q  S  +      L S+  F S  +L CP+T
Subjt:  --QSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSA------LPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVT

AT3G02150.2 plastid transcription factor 12.3e-2338.1Show/hide
Query:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ----NYFDPNDSILH--------
        +PRI + +  FGGKDRHSKV T++GLRDRR+RLS PTAIQ+YDLQ RLG+ QPSK +DWL+     EID+LPPL       + F+ + S L+        
Subjt:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQ----NYFDPNDSILH--------

Query:  --QSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSA------LPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVT
          Q  F ++       +     EE +R   +    +TN+  V +      L  + H  Q  S  +      L S+  F S  +L CP+T
Subjt:  --QSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSA------LPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVT

AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 22.9e-1853.57Show/hide
Query:  GGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYFDPNDSILHQSSFIVS
        GGKDRHSKV T KG RDRR+RLS  TA+Q YDLQ+RLG  QPSK ++WLI+     I +LP L+  N   P D   HQ+  + +
Subjt:  GGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYFDPNDSILHQSSFIVS

AT5G08070.1 TCP domain protein 177.2e-2562.37Show/hide
Query:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF---DPNDSILHQS
        NPRI + +  FGGKDRHSKV T++GLRDRRIRLS  TAIQ+YDLQ RLGL+QPSKVIDWL++V   ++D LPPL F   F   +PN + L +S
Subjt:  NPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF---DPNDSILHQS

AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 54.5e-2760.4Show/hide
Query:  QMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF
        Q +     +SSRQ     R NPRI + +  FGGKDRHSKV T++GLRDRRIRLS PTAIQ+YDLQ+RLGL+QPSKVIDWL++    ++DKLPPL F + F
Subjt:  QMEAKRKRASSRQGPCLIRGNPRIFK-AHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYF

Query:  D
        +
Subjt:  D


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAGAGGGAAAAGCAAAACAAATGGAGGCCAAAAGAAAAAGAGCATCTTCAAGGCAAGGGCCATGTCTAATTAGGGGCAACCCAAGAATTTTTAAAGCCCATTT
ATTTGGAGGCAAAGACAGGCACAGCAAAGTTTACACAATTAAGGGCTTAAGAGACAGAAGAATTAGGCTTTCAACCCCAACTGCTATTCAAATTTATGATTTGCAGAACA
GACTTGGCCTCACTCAGCCCAGCAAAGTCATTGATTGGCTGATCCAAGTCACAAGTTTTGAAATTGATAAGCTCCCACCACTCCATTTTCAAAATTATTTTGACCCAAAT
GACTCAATTCTTCATCAATCCTCATTCATTGTTTCTCAAATTTGTCATTTTGATGCTGCTGTTGAGGCCAAAAATGAAGAGACTGAAAGGGTTTTGGTTCAAAAGTTGTC
TCCTTTTACTAACCATGATTCTGTTTCTGCTCTTCCAAGAAATGCCCATGATTTTCAGGTTTCAAGCTTTTCATCTCCTTTAATGGAGGCTCATCTAGCTTCGGTTTCTT
CGTTTTCCTCTGCGTCGTTGCTCTTCTGCCCGGTTACAAGGTTGTCGGAAGTTTCTCCCGATCTTCGTTACAGCGGGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAGAGGGAAAAGCAAAACAAATGGAGGCCAAAAGAAAAAGAGCATCTTCAAGGCAAGGGCCATGTCTAATTAGGGGCAACCCAAGAATTTTTAAAGCCCATTT
ATTTGGAGGCAAAGACAGGCACAGCAAAGTTTACACAATTAAGGGCTTAAGAGACAGAAGAATTAGGCTTTCAACCCCAACTGCTATTCAAATTTATGATTTGCAGAACA
GACTTGGCCTCACTCAGCCCAGCAAAGTCATTGATTGGCTGATCCAAGTCACAAGTTTTGAAATTGATAAGCTCCCACCACTCCATTTTCAAAATTATTTTGACCCAAAT
GACTCAATTCTTCATCAATCCTCATTCATTGTTTCTCAAATTTGTCATTTTGATGCTGCTGTTGAGGCCAAAAATGAAGAGACTGAAAGGGTTTTGGTTCAAAAGTTGTC
TCCTTTTACTAACCATGATTCTGTTTCTGCTCTTCCAAGAAATGCCCATGATTTTCAGGTTTCAAGCTTTTCATCTCCTTTAATGGAGGCTCATCTAGCTTCGGTTTCTT
CGTTTTCCTCTGCGTCGTTGCTCTTCTGCCCGGTTACAAGGTTGTCGGAAGTTTCTCCCGATCTTCGTTACAGCGGGAATTAA
Protein sequenceShow/hide protein sequence
MRQEGKAKQMEAKRKRASSRQGPCLIRGNPRIFKAHLFGGKDRHSKVYTIKGLRDRRIRLSTPTAIQIYDLQNRLGLTQPSKVIDWLIQVTSFEIDKLPPLHFQNYFDPN
DSILHQSSFIVSQICHFDAAVEAKNEETERVLVQKLSPFTNHDSVSALPRNAHDFQVSSFSSPLMEAHLASVSSFSSASLLFCPVTRLSEVSPDLRYSGN